RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 SDF2L1Q9HCN8 221 aa11.78□□□□□ -0.52
GPHN-211ENST00000556020 FXYD6-FXYD2A0A087WZ82 144 aa11.77□□□□□ -0.53
GPHN-211ENST00000556020 MBP02144 154 aa11.77□□□□□ -0.53
GPHN-211ENST00000556020 TCRAP04437 139 aa11.77□□□□□ -0.53
GPHN-211ENST00000556020 GIPP09681 153 aaPredicted RBP11.77□□□□□ -0.53
GPHN-211ENST00000556020 GYPEP15421 78 aa11.77□□□□□ -0.53
GPHN-211ENST00000556020 C5orf17Q8NAS9 161 aa11.77□□□□□ -0.53
GPHN-211ENST00000556020 INO80EQ8NBZ0 244 aaPredicted RBP11.77□□□□□ -0.53
GPHN-211ENST00000556020 OR4C5Q8NGB2 326 aa11.77□□□□□ -0.53
GPHN-211ENST00000556020 K7EQD1 137 aa11.76□□□□□ -0.53
GPHN-211ENST00000556020 K7EQM0 130 aa11.76□□□□□ -0.53
GPHN-211ENST00000556020 M0R2P5 195 aa11.76□□□□□ -0.53
GPHN-211ENST00000556020 RPL7L1Q6DKI1 246 aaKnown RBP11.76□□□□□ -0.53
GPHN-211ENST00000556020 ASB13Q8WXK3 278 aa11.76□□□□□ -0.53
GPHN-211ENST00000556020 ACTR3CQ9C0K3 210 aaPredicted RBP11.76□□□□□ -0.53
GPHN-211ENST00000556020 TRAV4A0A0B4J268 109 aa11.75□□□□□ -0.53
GPHN-211ENST00000556020 C9JCJ5 164 aa11.75□□□□□ -0.53
GPHN-211ENST00000556020 CXorf1O96002 111 aa11.75□□□□□ -0.53
GPHN-211ENST00000556020 SUMO1P63165 101 aaKnown RBP11.75□□□□□ -0.53
GPHN-211ENST00000556020 SERF2P84101 59 aa11.75□□□□□ -0.53
GPHN-211ENST00000556020 PRNTQ86SH4 94 aa11.75□□□□□ -0.53
GPHN-211ENST00000556020 KCNS1Q96KK3 526 aa11.75□□□□□ -0.53
GPHN-211ENST00000556020 PSG8Q9UQ74 426 aa11.75□□□□□ -0.53
GPHN-211ENST00000556020 SERTM2A0A1B0GWG4 89 aa11.74□□□□□ -0.53
GPHN-211ENST00000556020 GGTLC3B5MD39 225 aa11.74□□□□□ -0.53
GPHN-211ENST00000556020 GCGP01275 180 aa11.74□□□□□ -0.53
GPHN-211ENST00000556020 ORM1P02763 201 aa11.74□□□□□ -0.53
GPHN-211ENST00000556020 ZNF80P51504 273 aaPredicted RBP11.74□□□□□ -0.53
GPHN-211ENST00000556020 KRTAP10-2P60368 255 aa11.74□□□□□ -0.53
GPHN-211ENST00000556020 TMEM167BQ9NRX6 74 aa11.74□□□□□ -0.53
GPHN-211ENST00000556020 TNFSF18Q9UNG2 199 aa11.74□□□□□ -0.53
GPHN-211ENST00000556020 TNFRSF18Q9Y5U5 241 aa11.74□□□□□ -0.53
GPHN-211ENST00000556020 BORCS7-ASMTA0A0B4J1R7 106 aa11.73□□□□□ -0.53
GPHN-211ENST00000556020 LOC100131303A0A0U1RQF7 123 aa11.73□□□□□ -0.53
GPHN-211ENST00000556020 RNF222A6NCQ9 220 aa11.73□□□□□ -0.53
GPHN-211ENST00000556020 FLI1Q01543 452 aaPredicted RBP11.73□□□□□ -0.53
GPHN-211ENST00000556020 ZFP69Q49AA0 526 aa11.73□□□□□ -0.53
GPHN-211ENST00000556020 WFDC10BQ8IUB3 73 aa11.73□□□□□ -0.53
GPHN-211ENST00000556020 TMEM75Q8N9X5 138 aa11.73□□□□□ -0.53
GPHN-211ENST00000556020 OR2T35Q8NGX2 323 aa11.73□□□□□ -0.53
GPHN-211ENST00000556020 SUN5Q8TC36 379 aa11.73□□□□□ -0.53
GPHN-211ENST00000556020 C11orf21Q9P2W6 132 aa11.73□□□□□ -0.53
GPHN-211ENST00000556020 EPDR1Q9UM22 224 aa11.73□□□□□ -0.53
GPHN-211ENST00000556020 BTF3P20290 206 aaKnown RBP11.72□□□□□ -0.53
GPHN-211ENST00000556020 CYB561D1Q8N8Q1 229 aa11.72□□□□□ -0.53
GPHN-211ENST00000556020 NHLRC2Q8NBF2 726 aa11.72□□□□□ -0.53
GPHN-211ENST00000556020 TXNDC17Q9BRA2 123 aa11.72□□□□□ -0.53
GPHN-211ENST00000556020 LY96Q9Y6Y9 160 aa11.72□□□□□ -0.53
GPHN-211ENST00000556020 LRP1BQ9NZR2 4599 aa11.72□□□□□ -0.53
GPHN-211ENST00000556020 TAAR5O14804 337 aa11.71□□□□□ -0.53
GPHN-211ENST00000556020 IGLV2-11P01706 119 aa11.71□□□□□ -0.53
GPHN-211ENST00000556020 UBE2G2P60604 165 aa11.71□□□□□ -0.53
GPHN-211ENST00000556020 SMUG1Q53HV7 270 aa11.71□□□□□ -0.53
GPHN-211ENST00000556020 Q6ZRN7 208 aaPredicted RBP11.71□□□□□ -0.53
GPHN-211ENST00000556020 KRTAP4-5Q9BYR2 181 aa11.71□□□□□ -0.53
GPHN-211ENST00000556020 ABCA13Q86UQ4 5058 aa11.7□□□□□ -0.54
GPHN-211ENST00000556020 IGHV3-73A0A0B4J1V6 119 aa11.7□□□□□ -0.54
GPHN-211ENST00000556020 TRAV34A0A0B4J273 112 aa11.7□□□□□ -0.54
GPHN-211ENST00000556020 FBLL1A6NHQ2 334 aaKnown RBP11.7□□□□□ -0.54
GPHN-211ENST00000556020 CDK2AP2O75956 126 aa11.7□□□□□ -0.54
GPHN-211ENST00000556020 IFNA7P01567 189 aa11.7□□□□□ -0.54
GPHN-211ENST00000556020 PFN1P07737 140 aaKnown RBP11.7□□□□□ -0.54
GPHN-211ENST00000556020 FGF8P55075 233 aaPredicted RBP11.7□□□□□ -0.54
GPHN-211ENST00000556020 ZNF726P1Q15940 193 aa11.7□□□□□ -0.54
GPHN-211ENST00000556020 ZNF876PQ49A33 203 aa11.7□□□□□ -0.54
GPHN-211ENST00000556020 MAPKAPK5-AS1Q8N8E1 139 aa11.7□□□□□ -0.54
GPHN-211ENST00000556020 LINC00479Q96M42 142 aa11.7□□□□□ -0.54
GPHN-211ENST00000556020 HSPG2P98160 4391 aa11.7□□□□□ -0.54
GPHN-211ENST00000556020 TRAV9-2A0A087WT02 112 aa11.69□□□□□ -0.54
GPHN-211ENST00000556020 CTXND1A0A1B0GTU2 59 aa11.69□□□□□ -0.54
GPHN-211ENST00000556020 FUSP35637 526 aaKnown RBP eCLIP11.69□□□□□ -0.54
GPHN-211ENST00000556020 A0A1W2PRE2 83 aa11.68□□□□□ -0.54
GPHN-211ENST00000556020 ARPC5O15511 151 aa11.68□□□□□ -0.54
GPHN-211ENST00000556020 GATA1P15976 413 aaPredicted RBP11.68□□□□□ -0.54
GPHN-211ENST00000556020 EVI2AP22794 236 aa11.68□□□□□ -0.54
GPHN-211ENST00000556020 PPT1P50897 306 aa11.68□□□□□ -0.54
GPHN-211ENST00000556020 SAPCD1Q5SSQ6 148 aa11.68□□□□□ -0.54
GPHN-211ENST00000556020 AKR1C8PQ5T2L2 129 aa11.68□□□□□ -0.54
GPHN-211ENST00000556020 DPPA3Q6W0C5 159 aa11.68□□□□□ -0.54
GPHN-211ENST00000556020 EREGO14944 169 aa11.67□□□□□ -0.54
GPHN-211ENST00000556020 ERVFC1-1P60608 527 aa11.67□□□□□ -0.54
GPHN-211ENST00000556020 RGS21Q2M5E4 152 aa11.67□□□□□ -0.54
GPHN-211ENST00000556020 CFAP126Q5VTH2 177 aa11.67□□□□□ -0.54
GPHN-211ENST00000556020 SLC25A29Q8N8R3 303 aa11.67□□□□□ -0.54
GPHN-211ENST00000556020 C9orf85Q96MD7 179 aa11.67□□□□□ -0.54
GPHN-211ENST00000556020 ARL2-SNX15V9GYD0 113 aa11.67□□□□□ -0.54
GPHN-211ENST00000556020 PGPEP1LA6NFU8 196 aa11.66□□□□□ -0.54
GPHN-211ENST00000556020 G3V3Q6 166 aa11.66□□□□□ -0.54
GPHN-211ENST00000556020 RS1O15537 224 aa11.66□□□□□ -0.54
GPHN-211ENST00000556020 ZNF506Q5JVG8 444 aa11.66□□□□□ -0.54
GPHN-211ENST00000556020 NFE4Q86UQ8 179 aa11.66□□□□□ -0.54
GPHN-211ENST00000556020 MSRB1Q9NZV6 116 aa11.66□□□□□ -0.54
GPHN-211ENST00000556020 SMLR1H3BR10 107 aa11.65□□□□□ -0.54
GPHN-211ENST00000556020 PEX7O00628 323 aa11.65□□□□□ -0.54
GPHN-211ENST00000556020 CRYGDP07320 174 aa11.65□□□□□ -0.54
GPHN-211ENST00000556020 DNAH10OSP0CZ25 163 aa11.65□□□□□ -0.54
GPHN-211ENST00000556020 SH2D6Q7Z4S9 175 aa11.65□□□□□ -0.54
GPHN-211ENST00000556020 PRADC1Q9BSG0 188 aa11.65□□□□□ -0.54
GPHN-211ENST00000556020 DNAH5Q8TE73 4624 aa11.64□□□□□ -0.55
GPHN-211ENST00000556020 APOBP04114 4563 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms