RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 SERTM2A0A1B0GWG4 89 aa4.59□□□□□ -1.67
SCFD1-212ENST00000554486 TMEM250H0YL14 139 aa4.59□□□□□ -1.67
SCFD1-212ENST00000554486 IGKV3-20P01619 116 aa4.59□□□□□ -1.67
SCFD1-212ENST00000554486 PRB2P02812 416 aaPredicted RBP4.59□□□□□ -1.67
SCFD1-212ENST00000554486 CT45A10P0DMU9 189 aa4.59□□□□□ -1.67
SCFD1-212ENST00000554486 AKR1C3P42330 323 aa4.59□□□□□ -1.67
SCFD1-212ENST00000554486 CNN1P51911 297 aaKnown RBP4.59□□□□□ -1.67
SCFD1-212ENST00000554486 Q75L30 129 aa4.59□□□□□ -1.67
SCFD1-212ENST00000554486 TRPT1Q86TN4 253 aaKnown RBP4.59□□□□□ -1.67
SCFD1-212ENST00000554486 EIF4E3Q8N5X7 224 aaKnown RBP4.59□□□□□ -1.67
SCFD1-212ENST00000554486 TMEM75Q8N9X5 138 aa4.59□□□□□ -1.67
SCFD1-212ENST00000554486 Q8TAT8 98 aa4.59□□□□□ -1.67
SCFD1-212ENST00000554486 TVP23CQ96ET8 276 aa4.59□□□□□ -1.67
SCFD1-212ENST00000554486 FAM19A4Q96LR4 140 aa4.59□□□□□ -1.67
SCFD1-212ENST00000554486 LINC00477Q96M19 166 aa4.59□□□□□ -1.67
SCFD1-212ENST00000554486 ASCL2Q99929 193 aa4.59□□□□□ -1.67
SCFD1-212ENST00000554486 SMDT1Q9H4I9 107 aa4.59□□□□□ -1.67
SCFD1-212ENST00000554486 SRD5A3Q9H8P0 318 aa4.59□□□□□ -1.67
SCFD1-212ENST00000554486 MEGF8Q7Z7M0 2845 aa4.58□□□□□ -1.68
SCFD1-212ENST00000554486 TRBV20OR9-2A0A075B6H5 130 aa4.58□□□□□ -1.68
SCFD1-212ENST00000554486 K7EIL1 84 aa4.58□□□□□ -1.68
SCFD1-212ENST00000554486 K7EQM0 130 aa4.58□□□□□ -1.68
SCFD1-212ENST00000554486 DUSP14O95147 198 aaKnown RBP4.58□□□□□ -1.68
SCFD1-212ENST00000554486 GIG44P09565 113 aaPredicted RBP4.58□□□□□ -1.68
SCFD1-212ENST00000554486 RPL35AP18077 110 aaKnown RBP4.58□□□□□ -1.68
SCFD1-212ENST00000554486 RPL35P42766 123 aaKnown RBP4.58□□□□□ -1.68
SCFD1-212ENST00000554486 ZNF138P52744 262 aa4.58□□□□□ -1.68
SCFD1-212ENST00000554486 FLI1Q01543 452 aaPredicted RBP4.58□□□□□ -1.68
SCFD1-212ENST00000554486 TMEM183BQ1AE95 376 aa4.58□□□□□ -1.68
SCFD1-212ENST00000554486 UQCC3Q6UW78 93 aa4.58□□□□□ -1.68
SCFD1-212ENST00000554486 Q86TA4 180 aa4.58□□□□□ -1.68
SCFD1-212ENST00000554486 STHQ8IWL8 128 aa4.58□□□□□ -1.68
SCFD1-212ENST00000554486 ZFAND2AQ8N6M9 145 aa4.58□□□□□ -1.68
SCFD1-212ENST00000554486 OR4B1Q8NGF8 309 aa4.58□□□□□ -1.68
SCFD1-212ENST00000554486 FMC1Q96HJ9 113 aa4.58□□□□□ -1.68
SCFD1-212ENST00000554486 ODF3Q96PU9 254 aa4.58□□□□□ -1.68
SCFD1-212ENST00000554486 SLC35B3Q9H1N7 401 aa4.58□□□□□ -1.68
SCFD1-212ENST00000554486 PARLQ9H300 379 aa4.58□□□□□ -1.68
SCFD1-212ENST00000554486 TREM1Q9NP99 234 aa4.58□□□□□ -1.68
SCFD1-212ENST00000554486 ZNF492Q9P255 531 aa4.58□□□□□ -1.68
SCFD1-212ENST00000554486 PSG8Q9UQ74 426 aa4.58□□□□□ -1.68
SCFD1-212ENST00000554486 PRKDCP78527 4128 aaKnown RBP4.57□□□□□ -1.68
SCFD1-212ENST00000554486 M0R2Z0 102 aa4.57□□□□□ -1.68
SCFD1-212ENST00000554486 LTAP01374 205 aa4.57□□□□□ -1.68
SCFD1-212ENST00000554486 IGLV2-8P01709 118 aa4.57□□□□□ -1.68
SCFD1-212ENST00000554486 S100A9P06702 114 aaKnown RBP4.57□□□□□ -1.68
SCFD1-212ENST00000554486 CRISP2P16562 243 aa4.57□□□□□ -1.68
SCFD1-212ENST00000554486 CEBPGP53567 150 aa4.57□□□□□ -1.68
SCFD1-212ENST00000554486 FXYD7P58549 80 aa4.57□□□□□ -1.68
SCFD1-212ENST00000554486 TAS2R60P59551 318 aa4.57□□□□□ -1.68
SCFD1-212ENST00000554486 ZNF674Q2M3X9 581 aa4.57□□□□□ -1.68
SCFD1-212ENST00000554486 CENPWQ5EE01 88 aa4.57□□□□□ -1.68
SCFD1-212ENST00000554486 TMEM78Q5T7P6 136 aa4.57□□□□□ -1.68
SCFD1-212ENST00000554486 PRR9Q5T870 116 aa4.57□□□□□ -1.68
SCFD1-212ENST00000554486 LINC00322Q6ZN03 302 aaPredicted RBP4.57□□□□□ -1.68
SCFD1-212ENST00000554486 PRNTQ86SH4 94 aa4.57□□□□□ -1.68
SCFD1-212ENST00000554486 SLC7A5P1Q8MH63 180 aa4.57□□□□□ -1.68
SCFD1-212ENST00000554486 IGF2BP2-AS1Q96M15 143 aa4.57□□□□□ -1.68
SCFD1-212ENST00000554486 TUBA4BQ9H853 241 aa4.57□□□□□ -1.68
SCFD1-212ENST00000554486 LENEPQ9Y5L5 61 aa4.57□□□□□ -1.68
SCFD1-212ENST00000554486 LOC102724200A0A096LPH7 203 aaPredicted RBP4.56□□□□□ -1.68
SCFD1-212ENST00000554486 TRBV7-9A0A0J9YWB2 115 aa4.56□□□□□ -1.68
SCFD1-212ENST00000554486 TMEM218A2RU14 115 aa4.56□□□□□ -1.68
SCFD1-212ENST00000554486 FBLL1A6NHQ2 334 aaKnown RBP4.56□□□□□ -1.68
SCFD1-212ENST00000554486 KLLNB2CW77 178 aa4.56□□□□□ -1.68
SCFD1-212ENST00000554486 CRXO43186 299 aaPredicted RBP4.56□□□□□ -1.68
SCFD1-212ENST00000554486 SFTA3P0C7M3 94 aa4.56□□□□□ -1.68
SCFD1-212ENST00000554486 LEPP41159 167 aa4.56□□□□□ -1.68
SCFD1-212ENST00000554486 ZNF80P51504 273 aaPredicted RBP4.56□□□□□ -1.68
SCFD1-212ENST00000554486 UBE2G1P62253 170 aa4.56□□□□□ -1.68
SCFD1-212ENST00000554486 SPINK13Q1W4C9 94 aa4.56□□□□□ -1.68
SCFD1-212ENST00000554486 SOHLH1Q5JUK2 328 aa4.56□□□□□ -1.68
SCFD1-212ENST00000554486 Q6ZQT7 251 aa4.56□□□□□ -1.68
SCFD1-212ENST00000554486 COX8CQ7Z4L0 72 aa4.56□□□□□ -1.68
SCFD1-212ENST00000554486 BAGE2Q86Y30 109 aa4.56□□□□□ -1.68
SCFD1-212ENST00000554486 TMEM183AQ8IXX5 376 aa4.56□□□□□ -1.68
SCFD1-212ENST00000554486 NHLRC2Q8NBF2 726 aa4.56□□□□□ -1.68
SCFD1-212ENST00000554486 SMIM7Q9BQ49 75 aa4.56□□□□□ -1.68
SCFD1-212ENST00000554486 ZFP30Q9Y2G7 519 aa4.56□□□□□ -1.68
SCFD1-212ENST00000554486 TENM3Q9P273 2699 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 TRAV12-2A0A075B6T6 113 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 KIR2DL5BA0A0G2JN68 375 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 KIR2DL5BA0A0G2JPC4 375 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 ZNF727A8MUV8 499 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 C9JCJ5 164 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 K7EN84 100 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 FRMD6-AS1P0C7T7 363 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 RBMY1A1P0DJD3 496 aaKnown RBP4.55□□□□□ -1.68
SCFD1-212ENST00000554486 RBMY1CP0DJD4 496 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 ADCYAP1P18509 176 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 TSPOP30536 169 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 CDKN1BP46527 198 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 GNG4P50150 75 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 CRIP1P50238 77 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 BTN1A1Q13410 526 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 RBMY1FQ15415 496 aaKnown RBP4.55□□□□□ -1.68
SCFD1-212ENST00000554486 NDUFA5Q16718 116 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 FAM74A3Q4VXF1 159 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 SMUG1Q53HV7 270 aa4.55□□□□□ -1.68
SCFD1-212ENST00000554486 SAPCD1Q5SSQ6 148 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms