RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 ICAM4Q14773 271 aa4.58□□□□□ -1.68
SLIRP-203ENST00000554074 ZNF726P1Q15940 193 aa4.58□□□□□ -1.68
SLIRP-203ENST00000554074 ZNF575Q86XF7 245 aa4.58□□□□□ -1.68
SLIRP-203ENST00000554074 EIF4E3Q8N5X7 224 aaKnown RBP4.58□□□□□ -1.68
SLIRP-203ENST00000554074 ZFAND2AQ8N6M9 145 aa4.58□□□□□ -1.68
SLIRP-203ENST00000554074 SFT2D1Q8WV19 159 aa4.58□□□□□ -1.68
SLIRP-203ENST00000554074 HIST1H2BAQ96A08 127 aa4.58□□□□□ -1.68
SLIRP-203ENST00000554074 AGPAT4-IT1Q9H0P7 198 aa4.58□□□□□ -1.68
SLIRP-203ENST00000554074 TMPRSS5Q9H3S3 457 aa4.58□□□□□ -1.68
SLIRP-203ENST00000554074 MANBALQ9NQG1 85 aa4.58□□□□□ -1.68
SLIRP-203ENST00000554074 MRPS16Q9Y3D3 137 aaKnown RBP4.58□□□□□ -1.68
SLIRP-203ENST00000554074 DYNC1H1Q14204 4646 aaKnown RBP4.58□□□□□ -1.68
SLIRP-203ENST00000554074 A0A096LPF7 62 aa4.57□□□□□ -1.68
SLIRP-203ENST00000554074 A0A0J9YY99 117 aa4.57□□□□□ -1.68
SLIRP-203ENST00000554074 C16orf90A8MZG2 172 aa4.57□□□□□ -1.68
SLIRP-203ENST00000554074 DIRC3C9JPN6 131 aa4.57□□□□□ -1.68
SLIRP-203ENST00000554074 J3KRW8 73 aa4.57□□□□□ -1.68
SLIRP-203ENST00000554074 SPINK4O60575 86 aa4.57□□□□□ -1.68
SLIRP-203ENST00000554074 IFNA1P01562 189 aa4.57□□□□□ -1.68
SLIRP-203ENST00000554074 S100A9P06702 114 aaKnown RBP4.57□□□□□ -1.68
SLIRP-203ENST00000554074 GPX1P07203 203 aa4.57□□□□□ -1.68
SLIRP-203ENST00000554074 NKX2-5P52952 324 aaPredicted RBP4.57□□□□□ -1.68
SLIRP-203ENST00000554074 ERCC8Q13216 396 aa4.57□□□□□ -1.68
SLIRP-203ENST00000554074 BTN1A1Q13410 526 aa4.57□□□□□ -1.68
SLIRP-203ENST00000554074 ESRGQ1W209 222 aa4.57□□□□□ -1.68
SLIRP-203ENST00000554074 TMEM78Q5T7P6 136 aa4.57□□□□□ -1.68
SLIRP-203ENST00000554074 Q6ZTI0 123 aa4.57□□□□□ -1.68
SLIRP-203ENST00000554074 EXOC3-AS1Q8N2X6 119 aa4.57□□□□□ -1.68
SLIRP-203ENST00000554074 LYPD6BQ8NI32 183 aa4.57□□□□□ -1.68
SLIRP-203ENST00000554074 VSIG2Q96IQ7 327 aa4.57□□□□□ -1.68
SLIRP-203ENST00000554074 KRTAP4-5Q9BYR2 181 aa4.57□□□□□ -1.68
SLIRP-203ENST00000554074 GSN-AS1Q9NRJ2 163 aa4.57□□□□□ -1.68
SLIRP-203ENST00000554074 ZNF492Q9P255 531 aa4.57□□□□□ -1.68
SLIRP-203ENST00000554074 DNAH11Q96DT5 4516 aa4.56□□□□□ -1.68
SLIRP-203ENST00000554074 TRGV2A0A075B6R0 118 aa4.56□□□□□ -1.68
SLIRP-203ENST00000554074 IGHV1OR15-1A0A075B7D0 117 aa4.56□□□□□ -1.68
SLIRP-203ENST00000554074 FAM74A7A6NL05 159 aa4.56□□□□□ -1.68
SLIRP-203ENST00000554074 RGS13O14921 159 aa4.56□□□□□ -1.68
SLIRP-203ENST00000554074 HMGB3O15347 200 aaKnown RBP4.56□□□□□ -1.68
SLIRP-203ENST00000554074 ZNF138P52744 262 aa4.56□□□□□ -1.68
SLIRP-203ENST00000554074 SUMO1P63165 101 aaKnown RBP4.56□□□□□ -1.68
SLIRP-203ENST00000554074 SLAQ13239 276 aa4.56□□□□□ -1.68
SLIRP-203ENST00000554074 TEX261Q6UWH6 196 aa4.56□□□□□ -1.68
SLIRP-203ENST00000554074 IQCF2Q8IXL9 164 aa4.56□□□□□ -1.68
SLIRP-203ENST00000554074 VGLL1Q99990 258 aa4.56□□□□□ -1.68
SLIRP-203ENST00000554074 KRTAP1-5Q9BYS1 174 aa4.56□□□□□ -1.68
SLIRP-203ENST00000554074 EPDR1Q9UM22 224 aa4.56□□□□□ -1.68
SLIRP-203ENST00000554074 KLF12Q9Y4X4 402 aa4.56□□□□□ -1.68
SLIRP-203ENST00000554074 IGKV2-40A0A087WW87 121 aaPredicted RBP4.55□□□□□ -1.68
SLIRP-203ENST00000554074 TRGV1A0A0A0MS02 117 aa4.55□□□□□ -1.68
SLIRP-203ENST00000554074 TRBV6-1A0A0K0K1D8 114 aa4.55□□□□□ -1.68
SLIRP-203ENST00000554074 PDE6DO43924 150 aa4.55□□□□□ -1.68
SLIRP-203ENST00000554074 IGKV2D-40P01614 121 aaPredicted RBP4.55□□□□□ -1.68
SLIRP-203ENST00000554074 TCRAP04437 139 aa4.55□□□□□ -1.68
SLIRP-203ENST00000554074 LORP23490 312 aaPredicted RBP4.55□□□□□ -1.68
SLIRP-203ENST00000554074 RNASE4P34096 147 aaKnown RBP4.55□□□□□ -1.68
SLIRP-203ENST00000554074 FGF8P55075 233 aaPredicted RBP4.55□□□□□ -1.68
SLIRP-203ENST00000554074 ZNF415Q09FC8 603 aa4.55□□□□□ -1.68
SLIRP-203ENST00000554074 SAPCD1Q5SSQ6 148 aa4.55□□□□□ -1.68
SLIRP-203ENST00000554074 PRR9Q5T870 116 aa4.55□□□□□ -1.68
SLIRP-203ENST00000554074 Q6AWC8 147 aa4.55□□□□□ -1.68
SLIRP-203ENST00000554074 ALKAL2Q6UX46 152 aa4.55□□□□□ -1.68
SLIRP-203ENST00000554074 CYB561D1Q8N8Q1 229 aa4.55□□□□□ -1.68
SLIRP-203ENST00000554074 TMEM75Q8N9X5 138 aa4.55□□□□□ -1.68
SLIRP-203ENST00000554074 NDFIP1Q9BT67 221 aa4.55□□□□□ -1.68
SLIRP-203ENST00000554074 PRO0255Q9UI72 69 aa4.55□□□□□ -1.68
SLIRP-203ENST00000554074 TP53TG3Q9ULZ0 132 aa4.55□□□□□ -1.68
SLIRP-203ENST00000554074 ICOSQ9Y6W8 199 aa4.55□□□□□ -1.68
SLIRP-203ENST00000554074 GGTLC3B5MD39 225 aa4.54□□□□□ -1.68
SLIRP-203ENST00000554074 K7EP13 123 aa4.54□□□□□ -1.68
SLIRP-203ENST00000554074 PEX7O00628 323 aa4.54□□□□□ -1.68
SLIRP-203ENST00000554074 PAX4O43316 350 aa4.54□□□□□ -1.68
SLIRP-203ENST00000554074 PAGE4O60829 102 aa4.54□□□□□ -1.68
SLIRP-203ENST00000554074 CRYBA4P53673 196 aa4.54□□□□□ -1.68
SLIRP-203ENST00000554074 TDRG1Q3Y452 100 aa4.54□□□□□ -1.68
SLIRP-203ENST00000554074 CST9LP1Q5W188 147 aa4.54□□□□□ -1.68
SLIRP-203ENST00000554074 GOLT1AQ6ZVE7 132 aa4.54□□□□□ -1.68
SLIRP-203ENST00000554074 RASL10AQ92737 203 aa4.54□□□□□ -1.68
SLIRP-203ENST00000554074 SMIM12Q96EX1 92 aa4.54□□□□□ -1.68
SLIRP-203ENST00000554074 FMC1Q96HJ9 113 aa4.54□□□□□ -1.68
SLIRP-203ENST00000554074 SMDT1Q9H4I9 107 aa4.54□□□□□ -1.68
SLIRP-203ENST00000554074 VAX2Q9UIW0 290 aa4.54□□□□□ -1.68
SLIRP-203ENST00000554074 ZFP30Q9Y2G7 519 aa4.54□□□□□ -1.68
SLIRP-203ENST00000554074 HSPG2P98160 4391 aa4.54□□□□□ -1.68
SLIRP-203ENST00000554074 TRGV11A0A075B6L2 103 aa4.53□□□□□ -1.68
SLIRP-203ENST00000554074 SIVA1O15304 175 aa4.53□□□□□ -1.68
SLIRP-203ENST00000554074 BCL2P10415 239 aa4.53□□□□□ -1.68
SLIRP-203ENST00000554074 UBE2G2P60604 165 aa4.53□□□□□ -1.68
SLIRP-203ENST00000554074 RAB14P61106 215 aa4.53□□□□□ -1.68
SLIRP-203ENST00000554074 FLI1Q01543 452 aaPredicted RBP4.53□□□□□ -1.68
SLIRP-203ENST00000554074 MEF2BQ02080 365 aaPredicted RBP4.53□□□□□ -1.68
SLIRP-203ENST00000554074 FHL2Q14192 279 aa4.53□□□□□ -1.68
SLIRP-203ENST00000554074 MRPL23Q16540 153 aaKnown RBP4.53□□□□□ -1.68
SLIRP-203ENST00000554074 TMEM183BQ1AE95 376 aa4.53□□□□□ -1.68
SLIRP-203ENST00000554074 Q6ZRN7 208 aaPredicted RBP4.53□□□□□ -1.68
SLIRP-203ENST00000554074 COX8CQ7Z4L0 72 aa4.53□□□□□ -1.68
SLIRP-203ENST00000554074 SPATA12Q7Z6I5 190 aa4.53□□□□□ -1.68
SLIRP-203ENST00000554074 LINC00528Q8N1L1 170 aa4.53□□□□□ -1.68
SLIRP-203ENST00000554074 Q8TAT8 98 aa4.53□□□□□ -1.68
SLIRP-203ENST00000554074 C11orf52Q96A22 123 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms