RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 LINC00575Q6W349 94 aa1.3□□□□□ -2.2
PCNX4-206ENST00000553513 SNX29P2Q8IUI4 249 aa1.3□□□□□ -2.2
PCNX4-206ENST00000553513 CTAGE3PQ8IX95 158 aa1.3□□□□□ -2.2
PCNX4-206ENST00000553513 TSC22D3Q99576 134 aa1.3□□□□□ -2.2
PCNX4-206ENST00000553513 SAR1AQ9NR31 198 aa1.3□□□□□ -2.2
PCNX4-206ENST00000553513 MRPL36Q9P0J6 103 aaKnown RBP1.3□□□□□ -2.2
PCNX4-206ENST00000553513 NOP16Q9Y3C1 178 aaKnown RBP1.3□□□□□ -2.2
PCNX4-206ENST00000553513 PTPRDP23468 1912 aa1.3□□□□□ -2.2
PCNX4-206ENST00000553513 DISP2A7MBM2 1401 aa1.3□□□□□ -2.2
PCNX4-206ENST00000553513 COL1A1P02452 1464 aaPredicted RBP1.3□□□□□ -2.2
PCNX4-206ENST00000553513 MED12Q93074 2177 aa1.3□□□□□ -2.2
PCNX4-206ENST00000553513 USP54Q70EL1 1684 aa1.29□□□□□ -2.2
PCNX4-206ENST00000553513 PEAK1Q9H792 1746 aa1.29□□□□□ -2.2
PCNX4-206ENST00000553513 TRAV17A0A0B4J275 112 aa1.29□□□□□ -2.2
PCNX4-206ENST00000553513 A0A0G2JMM0 328 aa1.29□□□□□ -2.2
PCNX4-206ENST00000553513 IGHV3-30P01768 117 aa1.29□□□□□ -2.2
PCNX4-206ENST00000553513 IGHV3-30-5P0DP03 117 aa1.29□□□□□ -2.2
PCNX4-206ENST00000553513 IQCJQ1A5X6 159 aa1.29□□□□□ -2.2
PCNX4-206ENST00000553513 Q6ZQY7 126 aa1.29□□□□□ -2.2
PCNX4-206ENST00000553513 DNAJC15Q9Y5T4 150 aa1.29□□□□□ -2.2
PCNX4-206ENST00000553513 CEP152O94986 1710 aa1.29□□□□□ -2.2
PCNX4-206ENST00000553513 ZGRF1Q86YA3 2104 aa1.28□□□□□ -2.2
PCNX4-206ENST00000553513 CSAG1Q6PB30 78 aa1.28□□□□□ -2.2
PCNX4-206ENST00000553513 ATG5Q9H1Y0 275 aa1.28□□□□□ -2.2
PCNX4-206ENST00000553513 TPT1P8Q9HAU6 139 aa1.28□□□□□ -2.2
PCNX4-206ENST00000553513 KDM5CP41229 1560 aa1.28□□□□□ -2.2
PCNX4-206ENST00000553513 ANK1P16157 1881 aa1.28□□□□□ -2.2
PCNX4-206ENST00000553513 EML5Q05BV3 1969 aa1.28□□□□□ -2.2
PCNX4-206ENST00000553513 KIAA1549LQ6ZVL6 1849 aa1.27□□□□□ -2.21
PCNX4-206ENST00000553513 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.27□□□□□ -2.21
PCNX4-206ENST00000553513 E9PCH4 1651 aa1.27□□□□□ -2.21
PCNX4-206ENST00000553513 SOGA1O94964 1423 aa1.27□□□□□ -2.21
PCNX4-206ENST00000553513 J3QLW9 94 aa1.27□□□□□ -2.21
PCNX4-206ENST00000553513 IGKCP01834 107 aa1.27□□□□□ -2.21
PCNX4-206ENST00000553513 IGLC6P0CF74 106 aa1.27□□□□□ -2.21
PCNX4-206ENST00000553513 EFNA4P52798 201 aa1.27□□□□□ -2.21
PCNX4-206ENST00000553513 LYPD5Q6UWN5 251 aa1.27□□□□□ -2.21
PCNX4-206ENST00000553513 SLC25A26Q70HW3 274 aa1.27□□□□□ -2.21
PCNX4-206ENST00000553513 Q86TA4 180 aa1.27□□□□□ -2.21
PCNX4-206ENST00000553513 ATOH7Q8N100 152 aa1.27□□□□□ -2.21
PCNX4-206ENST00000553513 ATP6V0E2Q8NHE4 81 aa1.27□□□□□ -2.21
PCNX4-206ENST00000553513 PPDPFLQ8WWR9 84 aa1.27□□□□□ -2.21
PCNX4-206ENST00000553513 DMAC1Q96GE9 116 aa1.27□□□□□ -2.21
PCNX4-206ENST00000553513 PSMG3Q9BT73 122 aaPredicted RBP1.27□□□□□ -2.21
PCNX4-206ENST00000553513 CDK5RAP2Q96SN8 1893 aa1.26□□□□□ -2.21
PCNX4-206ENST00000553513 ARHGAP31Q2M1Z3 1444 aa1.26□□□□□ -2.21
PCNX4-206ENST00000553513 TRAV2A0A0B4J234 112 aa1.26□□□□□ -2.21
PCNX4-206ENST00000553513 TRBV30A0A0K0K1B3 111 aa1.26□□□□□ -2.21
PCNX4-206ENST00000553513 A0A1W2PPM0 123 aa1.26□□□□□ -2.21
PCNX4-206ENST00000553513 NUPR2A6NF83 97 aa1.26□□□□□ -2.21
PCNX4-206ENST00000553513 HIGD1CA8MV81 97 aa1.26□□□□□ -2.21
PCNX4-206ENST00000553513 NCR2O95944 276 aa1.26□□□□□ -2.21
PCNX4-206ENST00000553513 COPZ1P61923 177 aa1.26□□□□□ -2.21
PCNX4-206ENST00000553513 SBSPONQ8IVN8 264 aa1.26□□□□□ -2.21
PCNX4-206ENST00000553513 DYNLRB2Q8TF09 96 aa1.26□□□□□ -2.21
PCNX4-206ENST00000553513 MRPL35Q9NZE8 188 aaKnown RBP1.26□□□□□ -2.21
PCNX4-206ENST00000553513 HELZP42694 1942 aaKnown RBP1.26□□□□□ -2.21
PCNX4-206ENST00000553513 ASCC3Q8N3C0 2202 aaKnown RBP1.25□□□□□ -2.21
PCNX4-206ENST00000553513 CCDC171Q6TFL3 1326 aa1.25□□□□□ -2.21
PCNX4-206ENST00000553513 TRBV20-1A0A075B6N2 111 aa1.25□□□□□ -2.21
PCNX4-206ENST00000553513 IGF2P01344 180 aa1.25□□□□□ -2.21
PCNX4-206ENST00000553513 GLYATL3Q5SZD4 288 aa1.25□□□□□ -2.21
PCNX4-206ENST00000553513 ATP11AUNQ6ZP68 121 aa1.25□□□□□ -2.21
PCNX4-206ENST00000553513 Q6ZS92 163 aa1.25□□□□□ -2.21
PCNX4-206ENST00000553513 FLG2Q5D862 2391 aaPredicted RBP1.25□□□□□ -2.21
PCNX4-206ENST00000553513 TRPM7Q96QT4 1865 aa1.24□□□□□ -2.21
PCNX4-206ENST00000553513 M0R2P5 195 aa1.24□□□□□ -2.21
PCNX4-206ENST00000553513 TSPAN19P0C672 248 aa1.24□□□□□ -2.21
PCNX4-206ENST00000553513 LINC00694P0DN24 101 aa1.24□□□□□ -2.21
PCNX4-206ENST00000553513 LSM2Q9Y333 95 aaKnown RBP1.24□□□□□ -2.21
PCNX4-206ENST00000553513 COL6A6A6NMZ7 2263 aa1.24□□□□□ -2.21
PCNX4-206ENST00000553513 UHRF1BP1LA0JNW5 1464 aa1.24□□□□□ -2.21
PCNX4-206ENST00000553513 SPTBP11277 2137 aa1.24□□□□□ -2.21
PCNX4-206ENST00000553513 TRBV10-1A0A0K0K1A3 114 aa1.23□□□□□ -2.21
PCNX4-206ENST00000553513 FAM236AA0A1B0GUQ0 79 aa1.23□□□□□ -2.21
PCNX4-206ENST00000553513 FAM236BA0A1B0GV22 79 aa1.23□□□□□ -2.21
PCNX4-206ENST00000553513 A6NN06 94 aa1.23□□□□□ -2.21
PCNX4-206ENST00000553513 CAV3P56539 151 aa1.23□□□□□ -2.21
PCNX4-206ENST00000553513 FXYD6P3P58550 94 aa1.23□□□□□ -2.21
PCNX4-206ENST00000553513 RPS25P62851 125 aaKnown RBP1.23□□□□□ -2.21
PCNX4-206ENST00000553513 XAF1Q6GPH4 301 aa1.23□□□□□ -2.21
PCNX4-206ENST00000553513 TET1Q8NFU7 2136 aa1.23□□□□□ -2.21
PCNX4-206ENST00000553513 PPP1R1CQ8WVI7 109 aa1.23□□□□□ -2.21
PCNX4-206ENST00000553513 CCDC179H3BU77 68 aa1.22□□□□□ -2.21
PCNX4-206ENST00000553513 NPFFO15130 113 aa1.22□□□□□ -2.21
PCNX4-206ENST00000553513 CCKP06307 115 aa1.22□□□□□ -2.21
PCNX4-206ENST00000553513 PRB4P10163 310 aaPredicted RBP1.22□□□□□ -2.21
PCNX4-206ENST00000553513 GUCA1AP43080 201 aaPredicted RBP1.22□□□□□ -2.21
PCNX4-206ENST00000553513 RRAS2P62070 204 aaPredicted RBP1.22□□□□□ -2.21
PCNX4-206ENST00000553513 KCNRGQ8N5I3 272 aa1.22□□□□□ -2.21
PCNX4-206ENST00000553513 CCL19Q99731 98 aa1.22□□□□□ -2.21
PCNX4-206ENST00000553513 ERG28Q9UKR5 140 aa1.22□□□□□ -2.21
PCNX4-206ENST00000553513 FCGBPQ9Y6R7 5405 aaPredicted RBP1.22□□□□□ -2.21
PCNX4-206ENST00000553513 SYNJ1O43426 1573 aa1.21□□□□□ -2.22
PCNX4-206ENST00000553513 ATG2AQ2TAZ0 1938 aa1.21□□□□□ -2.22
PCNX4-206ENST00000553513 A6NIN4 97 aa1.21□□□□□ -2.22
PCNX4-206ENST00000553513 FAM25AB3EWG3 89 aa1.21□□□□□ -2.22
PCNX4-206ENST00000553513 FAM25CB3EWG5 89 aa1.21□□□□□ -2.22
PCNX4-206ENST00000553513 FAM25GB3EWG6 89 aa1.21□□□□□ -2.22
PCNX4-206ENST00000553513 M0R129 80 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms