RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 TPRP12270 2363 aaKnown RBP1.3□□□□□ -2.2
SYNE2-210ENST00000553455 ACACBO00763 2458 aa1.3□□□□□ -2.2
SYNE2-210ENST00000553455 FRYQ5TBA9 3013 aa1.3□□□□□ -2.2
SYNE2-210ENST00000553455 EPG5Q9HCE0 2579 aa1.3□□□□□ -2.2
SYNE2-210ENST00000553455 CHD8Q9HCK8 2581 aa1.3□□□□□ -2.2
SYNE2-210ENST00000553455 FREM2Q5SZK8 3169 aa1.3□□□□□ -2.2
SYNE2-210ENST00000553455 SPEGQ15772 3267 aa1.3□□□□□ -2.2
SYNE2-210ENST00000553455 ITPR1Q14643 2758 aa1.3□□□□□ -2.2
SYNE2-210ENST00000553455 BPTFQ12830 3046 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 CFAP47Q6ZTR5 3102 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 CFAP46Q8IYW2 2715 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 DUXBA0A1W2PPF3 345 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 TCRBV4S1A1TA0A5B7 111 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 H7C1C5 153 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 IFNA1P01562 189 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 APODP05090 189 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 HLA-EP13747 358 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 NFYBP25208 207 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 PHBP35232 272 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 INSL3P51460 131 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 LCN6P62502 163 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 AKR1C8PQ5T2L2 129 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 LYG2Q86SG7 212 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 DEFB106AQ8N104 65 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 TMEM254Q8TBM7 123 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 PATE1Q8WXA2 126 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 LYSMD1Q96S90 227 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 PAIP2Q9BPZ3 127 aaKnown RBP1.29□□□□□ -2.2
SYNE2-210ENST00000553455 GINS3Q9BRX5 216 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 NPCDR1Q9BY65 106 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 SH3BGRL3Q9H299 93 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 ASXL3Q9C0F0 2248 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 NCOR2Q9Y618 2525 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 PRRC2CQ9Y520 2896 aaKnown RBP1.29□□□□□ -2.2
SYNE2-210ENST00000553455 MUC22E2RYF6 1773 aaPredicted RBP1.29□□□□□ -2.2
SYNE2-210ENST00000553455 KALRNO60229 2985 aa1.29□□□□□ -2.2
SYNE2-210ENST00000553455 GOLGA4Q13439 2230 aaKnown RBP1.28□□□□□ -2.2
SYNE2-210ENST00000553455 FCGBPQ9Y6R7 5405 aaPredicted RBP1.28□□□□□ -2.2
SYNE2-210ENST00000553455 IGSF10Q6WRI0 2623 aa1.28□□□□□ -2.2
SYNE2-210ENST00000553455 MGAQ8IWI9 3026 aa1.28□□□□□ -2.2
SYNE2-210ENST00000553455 LOC400499M0QZD8 3231 aa1.28□□□□□ -2.2
SYNE2-210ENST00000553455 CELSR3Q9NYQ7 3312 aa1.28□□□□□ -2.2
SYNE2-210ENST00000553455 LOC285095A0A1B0GVY8 99 aa1.28□□□□□ -2.2
SYNE2-210ENST00000553455 AIPO00170 330 aa1.28□□□□□ -2.2
SYNE2-210ENST00000553455 CRHP06850 196 aa1.28□□□□□ -2.2
SYNE2-210ENST00000553455 KDELR1P24390 212 aa1.28□□□□□ -2.2
SYNE2-210ENST00000553455 SDC4P31431 198 aa1.28□□□□□ -2.2
SYNE2-210ENST00000553455 GDF5OSQ5U4N7 250 aa1.28□□□□□ -2.2
SYNE2-210ENST00000553455 PATE2Q6UY27 113 aa1.28□□□□□ -2.2
SYNE2-210ENST00000553455 TMED4Q7Z7H5 227 aa1.28□□□□□ -2.2
SYNE2-210ENST00000553455 TAC4Q86UU9 113 aa1.28□□□□□ -2.2
SYNE2-210ENST00000553455 TSTD1Q8NFU3 115 aa1.28□□□□□ -2.2
SYNE2-210ENST00000553455 LYRM2Q9NU23 88 aaPredicted RBP1.28□□□□□ -2.2
SYNE2-210ENST00000553455 UNC13CQ8NB66 2214 aa1.28□□□□□ -2.2
SYNE2-210ENST00000553455 URB1O60287 2271 aaKnown RBP1.28□□□□□ -2.2
SYNE2-210ENST00000553455 SPTBN2O15020 2390 aa1.28□□□□□ -2.2
SYNE2-210ENST00000553455 USP24Q9UPU5 2620 aa1.28□□□□□ -2.2
SYNE2-210ENST00000553455 ATMQ13315 3056 aa1.27□□□□□ -2.21
SYNE2-210ENST00000553455 ACACAQ13085 2346 aa1.27□□□□□ -2.21
SYNE2-210ENST00000553455 SPTY2D1-AS1A0A0U1RR47 76 aa1.27□□□□□ -2.21
SYNE2-210ENST00000553455 MIF4GDA9UHW6 222 aaKnown RBP1.27□□□□□ -2.21
SYNE2-210ENST00000553455 TMEM238C9JI98 176 aa1.27□□□□□ -2.21
SYNE2-210ENST00000553455 ZNF25P17030 456 aaPredicted RBP1.27□□□□□ -2.21
SYNE2-210ENST00000553455 MPV17LQ2QL34 196 aa1.27□□□□□ -2.21
SYNE2-210ENST00000553455 EIF5AL1Q6IS14 154 aaKnown RBP1.27□□□□□ -2.21
SYNE2-210ENST00000553455 DCUN1D2Q6PH85 259 aa1.27□□□□□ -2.21
SYNE2-210ENST00000553455 C4orf22Q6V702 233 aa1.27□□□□□ -2.21
SYNE2-210ENST00000553455 COX14Q96I36 57 aa1.27□□□□□ -2.21
SYNE2-210ENST00000553455 SNRNP25Q9BV90 132 aaKnown RBP1.27□□□□□ -2.21
SYNE2-210ENST00000553455 SSR3Q9UNL2 185 aa1.27□□□□□ -2.21
SYNE2-210ENST00000553455 U3KQA8 63 aa1.27□□□□□ -2.21
SYNE2-210ENST00000553455 PKD1L2Q7Z442 2459 aa1.27□□□□□ -2.21
SYNE2-210ENST00000553455 KIAA1549Q9HCM3 1950 aa1.27□□□□□ -2.21
SYNE2-210ENST00000553455 ANKRD36A6QL64 1941 aa1.27□□□□□ -2.21
SYNE2-210ENST00000553455 FLNCQ14315 2725 aa1.26□□□□□ -2.21
SYNE2-210ENST00000553455 APC2O95996 2303 aa1.26□□□□□ -2.21
SYNE2-210ENST00000553455 AHCTF1Q8WYP5 2266 aa1.26□□□□□ -2.21
SYNE2-210ENST00000553455 APOC4-APOC2K7ER74 178 aa1.26□□□□□ -2.21
SYNE2-210ENST00000553455 MFSD11O43934 449 aa1.26□□□□□ -2.21
SYNE2-210ENST00000553455 APOC2P02655 101 aa1.26□□□□□ -2.21
SYNE2-210ENST00000553455 SPINT3P49223 89 aa1.26□□□□□ -2.21
SYNE2-210ENST00000553455 GNG3P63215 75 aa1.26□□□□□ -2.21
SYNE2-210ENST00000553455 SCGB2B2Q4G0G5 96 aa1.26□□□□□ -2.21
SYNE2-210ENST00000553455 NCBP2-AS2Q69YL0 99 aa1.26□□□□□ -2.21
SYNE2-210ENST00000553455 SMIM20Q8N5G0 67 aa1.26□□□□□ -2.21
SYNE2-210ENST00000553455 ST6GALNAC3Q8NDV1 305 aa1.26□□□□□ -2.21
SYNE2-210ENST00000553455 OR13C6PQ8NH95 151 aa1.26□□□□□ -2.21
SYNE2-210ENST00000553455 MCEEQ96PE7 176 aa1.26□□□□□ -2.21
SYNE2-210ENST00000553455 LY96Q9Y6Y9 160 aa1.26□□□□□ -2.21
SYNE2-210ENST00000553455 MYLKQ15746 1914 aa1.26□□□□□ -2.21
SYNE2-210ENST00000553455 PLXNA2O75051 1894 aa1.26□□□□□ -2.21
SYNE2-210ENST00000553455 TLN1Q9Y490 2541 aaKnown RBP1.26□□□□□ -2.21
SYNE2-210ENST00000553455 AKAP9Q99996 3911 aa1.26□□□□□ -2.21
SYNE2-210ENST00000553455 MAP1BP46821 2468 aaKnown RBP1.26□□□□□ -2.21
SYNE2-210ENST00000553455 FAM208BQ5VWN6 2430 aa1.26□□□□□ -2.21
SYNE2-210ENST00000553455 PTPRQQ9UMZ3 2332 aa1.26□□□□□ -2.21
SYNE2-210ENST00000553455 PIEZO2Q9H5I5 2752 aa1.25□□□□□ -2.21
SYNE2-210ENST00000553455 ZFC3H1O60293 1989 aaKnown RBP1.25□□□□□ -2.21
SYNE2-210ENST00000553455 ZFYVE26Q68DK2 2539 aa1.25□□□□□ -2.21
SYNE2-210ENST00000553455 IGF2RP11717 2491 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms