RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 FAM19A4Q96LR4 140 aa8.29□□□□□ -1.08
CKAP4-202ENST00000552828 TMPRSS5Q9H3S3 457 aa8.29□□□□□ -1.08
CKAP4-202ENST00000552828 SMCO4Q9NRQ5 59 aa8.29□□□□□ -1.08
CKAP4-202ENST00000552828 RPH3ALQ9UNE2 315 aa8.29□□□□□ -1.08
CKAP4-202ENST00000552828 TRBV7-9A0A0J9YWB2 115 aa8.28□□□□□ -1.08
CKAP4-202ENST00000552828 GPX1P07203 203 aa8.28□□□□□ -1.08
CKAP4-202ENST00000552828 DEFB130BP0DP73 79 aa8.28□□□□□ -1.08
CKAP4-202ENST00000552828 DEFB130AP0DP74 79 aa8.28□□□□□ -1.08
CKAP4-202ENST00000552828 CRISP2P16562 243 aa8.28□□□□□ -1.08
CKAP4-202ENST00000552828 SUMO1P63165 101 aaKnown RBP8.28□□□□□ -1.08
CKAP4-202ENST00000552828 GOLT1AQ6ZVE7 132 aa8.28□□□□□ -1.08
CKAP4-202ENST00000552828 C15orf54Q8N8G6 183 aa8.28□□□□□ -1.08
CKAP4-202ENST00000552828 C5orf17Q8NAS9 161 aa8.28□□□□□ -1.08
CKAP4-202ENST00000552828 SFT2D1Q8WV19 159 aa8.28□□□□□ -1.08
CKAP4-202ENST00000552828 MBD3L1Q8WWY6 194 aa8.28□□□□□ -1.08
CKAP4-202ENST00000552828 TRAV12-3A0A0B4J271 114 aa8.27□□□□□ -1.09
CKAP4-202ENST00000552828 SERTM2A0A1B0GWG4 89 aa8.27□□□□□ -1.09
CKAP4-202ENST00000552828 C7orf71A4D174 169 aa8.27□□□□□ -1.09
CKAP4-202ENST00000552828 CBY3A6NI87 242 aa8.27□□□□□ -1.09
CKAP4-202ENST00000552828 KLLNB2CW77 178 aa8.27□□□□□ -1.09
CKAP4-202ENST00000552828 F5H768 121 aa8.27□□□□□ -1.09
CKAP4-202ENST00000552828 K7EQM0 130 aa8.27□□□□□ -1.09
CKAP4-202ENST00000552828 HTN1P15515 57 aa8.27□□□□□ -1.09
CKAP4-202ENST00000552828 AZU1P20160 251 aa8.27□□□□□ -1.09
CKAP4-202ENST00000552828 RNASE4P34096 147 aaKnown RBP8.27□□□□□ -1.09
CKAP4-202ENST00000552828 CCL18P55774 89 aa8.27□□□□□ -1.09
CKAP4-202ENST00000552828 GNG5P63218 68 aa8.27□□□□□ -1.09
CKAP4-202ENST00000552828 CBLN2Q8IUK8 224 aa8.27□□□□□ -1.09
CKAP4-202ENST00000552828 MAPKAPK5-AS1Q8N8E1 139 aa8.27□□□□□ -1.09
CKAP4-202ENST00000552828 Q8TAT8 98 aa8.27□□□□□ -1.09
CKAP4-202ENST00000552828 EPDR1Q9UM22 224 aa8.27□□□□□ -1.09
CKAP4-202ENST00000552828 LINC00588Q9Y4M8 146 aa8.27□□□□□ -1.09
CKAP4-202ENST00000552828 LENEPQ9Y5L5 61 aa8.27□□□□□ -1.09
CKAP4-202ENST00000552828 HERC1Q15751 4861 aa8.26□□□□□ -1.09
CKAP4-202ENST00000552828 GGTLC3B5MD39 225 aa8.26□□□□□ -1.09
CKAP4-202ENST00000552828 C9JQL5 133 aa8.26□□□□□ -1.09
CKAP4-202ENST00000552828 NUDT3O95989 172 aa8.26□□□□□ -1.09
CKAP4-202ENST00000552828 TCRAP04437 139 aa8.26□□□□□ -1.09
CKAP4-202ENST00000552828 ATP5G1P05496 136 aa8.26□□□□□ -1.09
CKAP4-202ENST00000552828 ATP5G3P48201 142 aa8.26□□□□□ -1.09
CKAP4-202ENST00000552828 UBE2G2P60604 165 aa8.26□□□□□ -1.09
CKAP4-202ENST00000552828 RHEBQ15382 184 aa8.26□□□□□ -1.09
CKAP4-202ENST00000552828 ZFAND2AQ8N6M9 145 aa8.26□□□□□ -1.09
CKAP4-202ENST00000552828 PYGO2Q9BRQ0 406 aa8.26□□□□□ -1.09
CKAP4-202ENST00000552828 BIN3Q9NQY0 253 aa8.26□□□□□ -1.09
CKAP4-202ENST00000552828 TRAV1-1A0A0B4J248 108 aa8.25□□□□□ -1.09
CKAP4-202ENST00000552828 COLCA2A8K830 154 aa8.25□□□□□ -1.09
CKAP4-202ENST00000552828 ZNF493Q6ZR52 646 aa8.25□□□□□ -1.09
CKAP4-202ENST00000552828 Q8N1X5 172 aa8.25□□□□□ -1.09
CKAP4-202ENST00000552828 C16orf74Q96GX8 76 aa8.25□□□□□ -1.09
CKAP4-202ENST00000552828 TRAV8-1A0A0A6YYK1 113 aa8.24□□□□□ -1.09
CKAP4-202ENST00000552828 A0A1B0GV50 99 aa8.24□□□□□ -1.09
CKAP4-202ENST00000552828 FBLL1A6NHQ2 334 aaKnown RBP8.24□□□□□ -1.09
CKAP4-202ENST00000552828 ZNF324O75467 553 aaPredicted RBP8.24□□□□□ -1.09
CKAP4-202ENST00000552828 PPT1P50897 306 aa8.24□□□□□ -1.09
CKAP4-202ENST00000552828 CST9LP1Q5W188 147 aa8.24□□□□□ -1.09
CKAP4-202ENST00000552828 CYB561D1Q8N8Q1 229 aa8.24□□□□□ -1.09
CKAP4-202ENST00000552828 TMEM263Q8WUH6 116 aaKnown RBP8.24□□□□□ -1.09
CKAP4-202ENST00000552828 NDFIP1Q9BT67 221 aa8.24□□□□□ -1.09
CKAP4-202ENST00000552828 TIMM8BQ9Y5J9 83 aaPredicted RBP8.24□□□□□ -1.09
CKAP4-202ENST00000552828 ARL2-SNX15V9GYD0 113 aa8.24□□□□□ -1.09
CKAP4-202ENST00000552828 F6UZH7 168 aa8.23□□□□□ -1.09
CKAP4-202ENST00000552828 MT-ND4LP03901 98 aa8.23□□□□□ -1.09
CKAP4-202ENST00000552828 PRR9Q5T870 116 aa8.23□□□□□ -1.09
CKAP4-202ENST00000552828 LINC00518Q8N0U6 118 aa8.23□□□□□ -1.09
CKAP4-202ENST00000552828 LINC00612Q8N6U2 182 aa8.23□□□□□ -1.09
CKAP4-202ENST00000552828 RNASE8Q8TDE3 154 aaKnown RBP8.23□□□□□ -1.09
CKAP4-202ENST00000552828 HIST1H2BAQ96A08 127 aa8.23□□□□□ -1.09
CKAP4-202ENST00000552828 SGK494Q96LW2 274 aa8.23□□□□□ -1.09
CKAP4-202ENST00000552828 LINC00467Q9BRT7 94 aa8.23□□□□□ -1.09
CKAP4-202ENST00000552828 TCEAL7Q9BRU2 100 aa8.23□□□□□ -1.09
CKAP4-202ENST00000552828 EIF5A2Q9GZV4 153 aaKnown RBP8.23□□□□□ -1.09
CKAP4-202ENST00000552828 Q9H8V8 135 aa8.23□□□□□ -1.09
CKAP4-202ENST00000552828 PSG8Q9UQ74 426 aa8.23□□□□□ -1.09
CKAP4-202ENST00000552828 C7orf77A4D0Y5 90 aa8.22□□□□□ -1.09
CKAP4-202ENST00000552828 RBFOX3A6NFN3 312 aa8.22□□□□□ -1.09
CKAP4-202ENST00000552828 PEX7O00628 323 aa8.22□□□□□ -1.09
CKAP4-202ENST00000552828 PAGE4O60829 102 aa8.22□□□□□ -1.09
CKAP4-202ENST00000552828 NDUFS6O75380 124 aaKnown RBP8.22□□□□□ -1.09
CKAP4-202ENST00000552828 BTF3P20290 206 aaKnown RBP8.22□□□□□ -1.09
CKAP4-202ENST00000552828 RAB5BP61020 215 aa8.22□□□□□ -1.09
CKAP4-202ENST00000552828 ZNF506Q5JVG8 444 aa8.22□□□□□ -1.09
CKAP4-202ENST00000552828 SPATA12Q7Z6I5 190 aa8.22□□□□□ -1.09
CKAP4-202ENST00000552828 PRNTQ86SH4 94 aa8.22□□□□□ -1.09
CKAP4-202ENST00000552828 TMEM75Q8N9X5 138 aa8.22□□□□□ -1.09
CKAP4-202ENST00000552828 KRTAP1-5Q9BYS1 174 aa8.22□□□□□ -1.09
CKAP4-202ENST00000552828 IGHV1OR15-1A0A075B7D0 117 aa8.21□□□□□ -1.1
CKAP4-202ENST00000552828 C1orf196B1AJZ1 125 aa8.21□□□□□ -1.1
CKAP4-202ENST00000552828 SNURFLB1AK76 121 aa8.21□□□□□ -1.1
CKAP4-202ENST00000552828 IGLV2-11P01706 119 aa8.21□□□□□ -1.1
CKAP4-202ENST00000552828 ANXA2RQ3ZCQ2 193 aa8.21□□□□□ -1.1
CKAP4-202ENST00000552828 TTC32Q5I0X7 151 aa8.21□□□□□ -1.1
CKAP4-202ENST00000552828 SAPCD1Q5SSQ6 148 aa8.21□□□□□ -1.1
CKAP4-202ENST00000552828 Q6AWC8 147 aa8.21□□□□□ -1.1
CKAP4-202ENST00000552828 TVP23CQ96ET8 276 aa8.21□□□□□ -1.1
CKAP4-202ENST00000552828 LINC00479Q96M42 142 aa8.21□□□□□ -1.1
CKAP4-202ENST00000552828 UPK3BQ9BT76 320 aa8.21□□□□□ -1.1
CKAP4-202ENST00000552828 NOP10Q9NPE3 64 aaKnown RBP8.21□□□□□ -1.1
CKAP4-202ENST00000552828 RPS10P5Q9NQ39 176 aa8.21□□□□□ -1.1
CKAP4-202ENST00000552828 A0A087WWC5 75 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 980.2 ms