RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 H3BNG1 76 aa8.13□□□□□ -1.11
LETMD1-221ENST00000550100 TAAR5O14804 337 aa8.13□□□□□ -1.11
LETMD1-221ENST00000550100 CCL18P55774 89 aa8.13□□□□□ -1.11
LETMD1-221ENST00000550100 FAM3BP58499 235 aaPredicted RBP8.13□□□□□ -1.11
LETMD1-221ENST00000550100 FAM159AQ6UWV7 190 aa8.13□□□□□ -1.11
LETMD1-221ENST00000550100 PRNTQ86SH4 94 aa8.13□□□□□ -1.11
LETMD1-221ENST00000550100 RASL10AQ92737 203 aa8.13□□□□□ -1.11
LETMD1-221ENST00000550100 TRAV21A0A0B4J279 112 aa8.13□□□□□ -1.11
LETMD1-221ENST00000550100 CRYBA4P53673 196 aa8.13□□□□□ -1.11
LETMD1-221ENST00000550100 FLI1Q01543 452 aaPredicted RBP8.13□□□□□ -1.11
LETMD1-221ENST00000550100 AKR1C8PQ5T2L2 129 aa8.13□□□□□ -1.11
LETMD1-221ENST00000550100 LINC00336Q6ZUF6 198 aa8.13□□□□□ -1.11
LETMD1-221ENST00000550100 ZNF575Q86XF7 245 aa8.13□□□□□ -1.11
LETMD1-221ENST00000550100 Q9H8V8 135 aa8.13□□□□□ -1.11
LETMD1-221ENST00000550100 HMSDA8MTL9 139 aa8.12□□□□□ -1.11
LETMD1-221ENST00000550100 PAX4O43316 350 aa8.12□□□□□ -1.11
LETMD1-221ENST00000550100 GCGP01275 180 aa8.12□□□□□ -1.11
LETMD1-221ENST00000550100 CRIP1P50238 77 aa8.12□□□□□ -1.11
LETMD1-221ENST00000550100 C1orf134Q5TEV5 83 aa8.12□□□□□ -1.11
LETMD1-221ENST00000550100 DPPA3Q6W0C5 159 aa8.12□□□□□ -1.11
LETMD1-221ENST00000550100 CYB561D1Q8N8Q1 229 aa8.12□□□□□ -1.11
LETMD1-221ENST00000550100 HHLA3Q9XRX5 114 aa8.12□□□□□ -1.11
LETMD1-221ENST00000550100 TRGV11A0A075B6L2 103 aa8.11□□□□□ -1.11
LETMD1-221ENST00000550100 MAP1LC3B2A6NCE7 125 aa8.11□□□□□ -1.11
LETMD1-221ENST00000550100 TNP2Q05952 138 aa8.11□□□□□ -1.11
LETMD1-221ENST00000550100 ZNF345Q14585 488 aa8.11□□□□□ -1.11
LETMD1-221ENST00000550100 SPXQ9BT56 116 aa8.11□□□□□ -1.11
LETMD1-221ENST00000550100 MAP1LC3BQ9GZQ8 125 aa8.11□□□□□ -1.11
LETMD1-221ENST00000550100 IGKV3D-20A0A0C4DH25 116 aa8.1□□□□□ -1.11
LETMD1-221ENST00000550100 LOC100131303A0A0U1RQF7 123 aa8.1□□□□□ -1.11
LETMD1-221ENST00000550100 SERTM2A0A1B0GWG4 89 aa8.1□□□□□ -1.11
LETMD1-221ENST00000550100 PEX7O00628 323 aa8.1□□□□□ -1.11
LETMD1-221ENST00000550100 UPK3BQ9BT76 320 aa8.1□□□□□ -1.11
LETMD1-221ENST00000550100 PRO0255Q9UI72 69 aa8.1□□□□□ -1.11
LETMD1-221ENST00000550100 MRPS16Q9Y3D3 137 aaKnown RBP8.1□□□□□ -1.11
LETMD1-221ENST00000550100 ARL2-SNX15V9GYD0 113 aa8.1□□□□□ -1.11
LETMD1-221ENST00000550100 A0A1B0GV50 99 aa8.09□□□□□ -1.11
LETMD1-221ENST00000550100 M0R2P5 195 aa8.09□□□□□ -1.11
LETMD1-221ENST00000550100 IFNA7P01567 189 aa8.09□□□□□ -1.11
LETMD1-221ENST00000550100 PFN1P07737 140 aaKnown RBP8.09□□□□□ -1.11
LETMD1-221ENST00000550100 RNASE3P12724 160 aaKnown RBP8.09□□□□□ -1.11
LETMD1-221ENST00000550100 TMUB2Q71RG4 321 aa8.09□□□□□ -1.11
LETMD1-221ENST00000550100 C9orf85Q96MD7 179 aa8.09□□□□□ -1.11
LETMD1-221ENST00000550100 SDF2L1Q9HCN8 221 aa8.09□□□□□ -1.11
LETMD1-221ENST00000550100 TRGV4A0A0C4DH28 118 aa8.08□□□□□ -1.12
LETMD1-221ENST00000550100 A0A0D9SG52 128 aa8.08□□□□□ -1.12
LETMD1-221ENST00000550100 PGPEP1LA6NFU8 196 aa8.08□□□□□ -1.12
LETMD1-221ENST00000550100 BCL2L11O43521 198 aa8.08□□□□□ -1.12
LETMD1-221ENST00000550100 SMUG1Q53HV7 270 aa8.08□□□□□ -1.12
LETMD1-221ENST00000550100 LYPD5Q6UWN5 251 aa8.08□□□□□ -1.12
LETMD1-221ENST00000550100 Q86TA4 180 aa8.08□□□□□ -1.12
LETMD1-221ENST00000550100 C6orf223Q8N319 242 aa8.08□□□□□ -1.12
LETMD1-221ENST00000550100 MBD3L1Q8WWY6 194 aa8.08□□□□□ -1.12
LETMD1-221ENST00000550100 ZC2HC1AQ96GY0 325 aa8.08□□□□□ -1.12
LETMD1-221ENST00000550100 NDFIP1Q9BT67 221 aa8.08□□□□□ -1.12
LETMD1-221ENST00000550100 ZNF471Q9BX82 626 aaPredicted RBP8.08□□□□□ -1.12
LETMD1-221ENST00000550100 TRAV4A0A0B4J268 109 aa8.07□□□□□ -1.12
LETMD1-221ENST00000550100 C9JCJ5 164 aa8.07□□□□□ -1.12
LETMD1-221ENST00000550100 K7EQD1 137 aa8.07□□□□□ -1.12
LETMD1-221ENST00000550100 K7EQM0 130 aa8.07□□□□□ -1.12
LETMD1-221ENST00000550100 PAGE4O60829 102 aa8.07□□□□□ -1.12
LETMD1-221ENST00000550100 SEC11BP0C7V7 166 aa8.07□□□□□ -1.12
LETMD1-221ENST00000550100 CCL20P78556 96 aa8.07□□□□□ -1.12
LETMD1-221ENST00000550100 LGALSLQ3ZCW2 172 aaPredicted RBP8.07□□□□□ -1.12
LETMD1-221ENST00000550100 Q6ZSN1 163 aa8.07□□□□□ -1.12
LETMD1-221ENST00000550100 FAM213BQ8TBF2 198 aa8.07□□□□□ -1.12
LETMD1-221ENST00000550100 KCNS1Q96KK3 526 aa8.07□□□□□ -1.12
LETMD1-221ENST00000550100 TNFRSF18Q9Y5U5 241 aa8.07□□□□□ -1.12
LETMD1-221ENST00000550100 ICOSQ9Y6W8 199 aa8.07□□□□□ -1.12
LETMD1-221ENST00000550100 LRP1BQ9NZR2 4599 aa8.07□□□□□ -1.12
LETMD1-221ENST00000550100 GYPEP15421 78 aa8.06□□□□□ -1.12
LETMD1-221ENST00000550100 ZNF876PQ49A33 203 aa8.06□□□□□ -1.12
LETMD1-221ENST00000550100 SAPCD1Q5SSQ6 148 aa8.06□□□□□ -1.12
LETMD1-221ENST00000550100 CFAP126Q5VTH2 177 aa8.06□□□□□ -1.12
LETMD1-221ENST00000550100 CST9LP1Q5W188 147 aa8.06□□□□□ -1.12
LETMD1-221ENST00000550100 Q6ZNX1 250 aa8.06□□□□□ -1.12
LETMD1-221ENST00000550100 OR4C5Q8NGB2 326 aa8.06□□□□□ -1.12
LETMD1-221ENST00000550100 SFT2D1Q8WV19 159 aa8.06□□□□□ -1.12
LETMD1-221ENST00000550100 IGHV3-73A0A0B4J1V6 119 aa8.06□□□□□ -1.12
LETMD1-221ENST00000550100 RS1O15537 224 aa8.06□□□□□ -1.12
LETMD1-221ENST00000550100 NXPH4O95158 308 aa8.06□□□□□ -1.12
LETMD1-221ENST00000550100 GATA1P15976 413 aaPredicted RBP8.06□□□□□ -1.12
LETMD1-221ENST00000550100 ZNF506Q5JVG8 444 aa8.06□□□□□ -1.12
LETMD1-221ENST00000550100 COX8CQ7Z4L0 72 aa8.06□□□□□ -1.12
LETMD1-221ENST00000550100 HIST1H2BAQ96A08 127 aa8.06□□□□□ -1.12
LETMD1-221ENST00000550100 KRTAP17-1Q9BYP8 105 aa8.06□□□□□ -1.12
LETMD1-221ENST00000550100 JPT2Q9H910 190 aa8.06□□□□□ -1.12
LETMD1-221ENST00000550100 Q9UF83 564 aa8.06□□□□□ -1.12
LETMD1-221ENST00000550100 KANTRA0A1W2PQU2 76 aa8.05□□□□□ -1.12
LETMD1-221ENST00000550100 FBLL1A6NHQ2 334 aaKnown RBP8.05□□□□□ -1.12
LETMD1-221ENST00000550100 FABP5P3A8MUU1 101 aa8.05□□□□□ -1.12
LETMD1-221ENST00000550100 KRBOX1C9JBD0 128 aa8.05□□□□□ -1.12
LETMD1-221ENST00000550100 SH2D1AO60880 128 aa8.05□□□□□ -1.12
LETMD1-221ENST00000550100 SLAQ13239 276 aa8.05□□□□□ -1.12
LETMD1-221ENST00000550100 MRPL23Q16540 153 aaKnown RBP8.05□□□□□ -1.12
LETMD1-221ENST00000550100 DNAH5Q8TE73 4624 aa8.05□□□□□ -1.12
LETMD1-221ENST00000550100 HSPG2P98160 4391 aa8.04□□□□□ -1.12
LETMD1-221ENST00000550100 SCO2A0A1W2PP80 73 aa8.04□□□□□ -1.12
LETMD1-221ENST00000550100 UMAD1C9J7I0 102 aa8.04□□□□□ -1.12
LETMD1-221ENST00000550100 Q6ZRN7 208 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms