RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 SDF2L1Q9HCN8 221 aa13.7□□□□□ -0.22
DDX54-207ENST00000550016 MDFICQ9P1T7 246 aa13.7□□□□□ -0.22
DDX54-207ENST00000550016 IGHV4-4A0A075B6R2 117 aa13.69□□□□□ -0.22
DDX54-207ENST00000550016 LCE6AA0A183 80 aa13.69□□□□□ -0.22
DDX54-207ENST00000550016 FABP5P3A8MUU1 101 aa13.69□□□□□ -0.22
DDX54-207ENST00000550016 GNRH2O43555 120 aa13.69□□□□□ -0.22
DDX54-207ENST00000550016 SPINK4O60575 86 aa13.69□□□□□ -0.22
DDX54-207ENST00000550016 ATP5G1P05496 136 aa13.69□□□□□ -0.22
DDX54-207ENST00000550016 TAGLN2P37802 199 aaKnown RBP13.69□□□□□ -0.22
DDX54-207ENST00000550016 MEF2BQ02080 365 aaPredicted RBP13.69□□□□□ -0.22
DDX54-207ENST00000550016 Q6ZTI0 123 aa13.69□□□□□ -0.22
DDX54-207ENST00000550016 C11orf52Q96A22 123 aa13.69□□□□□ -0.22
DDX54-207ENST00000550016 FAM210BQ96KR6 192 aa13.69□□□□□ -0.22
DDX54-207ENST00000550016 C11orf21Q9P2W6 132 aa13.69□□□□□ -0.22
DDX54-207ENST00000550016 VAX2Q9UIW0 290 aa13.69□□□□□ -0.22
DDX54-207ENST00000550016 TRGV1A0A0A0MS02 117 aa13.68□□□□□ -0.22
DDX54-207ENST00000550016 BCL2P10415 239 aa13.68□□□□□ -0.22
DDX54-207ENST00000550016 LGALS9BQ3B8N2 356 aa13.68□□□□□ -0.22
DDX54-207ENST00000550016 LYPD6BQ8NI32 183 aa13.68□□□□□ -0.22
DDX54-207ENST00000550016 ZC2HC1AQ96GY0 325 aa13.68□□□□□ -0.22
DDX54-207ENST00000550016 SPXQ9BT56 116 aa13.68□□□□□ -0.22
DDX54-207ENST00000550016 APLNQ9ULZ1 77 aa13.68□□□□□ -0.22
DDX54-207ENST00000550016 MUC4Q99102 2169 aa13.67□□□□□ -0.22
DDX54-207ENST00000550016 IGHV3-16A0A0C4DH30 117 aa13.67□□□□□ -0.22
DDX54-207ENST00000550016 PDE6DO43924 150 aa13.67□□□□□ -0.22
DDX54-207ENST00000550016 TYMSP04818 313 aa13.67□□□□□ -0.22
DDX54-207ENST00000550016 F5H768 121 aa13.66□□□□□ -0.22
DDX54-207ENST00000550016 NDUFAF3Q9BU61 184 aa13.66□□□□□ -0.22
DDX54-207ENST00000550016 TRGV2A0A075B6R0 118 aa13.65□□□□□ -0.22
DDX54-207ENST00000550016 RPL35P42766 123 aaKnown RBP13.65□□□□□ -0.22
DDX54-207ENST00000550016 CRIP1P50238 77 aa13.65□□□□□ -0.22
DDX54-207ENST00000550016 FAM162BQ5T6X4 162 aa13.65□□□□□ -0.22
DDX54-207ENST00000550016 BAGE2Q86Y30 109 aa13.65□□□□□ -0.22
DDX54-207ENST00000550016 C18orf15Q96N68 181 aa13.65□□□□□ -0.22
DDX54-207ENST00000550016 MRPL16Q9NX20 251 aaKnown RBP13.65□□□□□ -0.22
DDX54-207ENST00000550016 ZNF674Q2M3X9 581 aa13.64□□□□□ -0.23
DDX54-207ENST00000550016 TEX261Q6UWH6 196 aa13.64□□□□□ -0.23
DDX54-207ENST00000550016 MLST8Q9BVC4 326 aa13.64□□□□□ -0.23
DDX54-207ENST00000550016 RBFOX3A6NFN3 312 aa13.63□□□□□ -0.23
DDX54-207ENST00000550016 SH2D1AO60880 128 aa13.63□□□□□ -0.23
DDX54-207ENST00000550016 ORM1P02763 201 aa13.63□□□□□ -0.23
DDX54-207ENST00000550016 TMEM88Q6PEY1 159 aa13.63□□□□□ -0.23
DDX54-207ENST00000550016 NHLRC2Q8NBF2 726 aa13.63□□□□□ -0.23
DDX54-207ENST00000550016 LINC00476Q8WZB0 136 aa13.63□□□□□ -0.23
DDX54-207ENST00000550016 DERL1Q9BUN8 251 aa13.63□□□□□ -0.23
DDX54-207ENST00000550016 IGKV3D-20A0A0C4DH25 116 aa13.62□□□□□ -0.23
DDX54-207ENST00000550016 M0R2P5 195 aa13.62□□□□□ -0.23
DDX54-207ENST00000550016 RASL10AQ92737 203 aa13.62□□□□□ -0.23
DDX54-207ENST00000550016 MED9Q9NWA0 146 aa13.62□□□□□ -0.23
DDX54-207ENST00000550016 NACAE9PAV3 2078 aa13.62□□□□□ -0.23
DDX54-207ENST00000550016 LYSTQ99698 3801 aa13.61□□□□□ -0.23
DDX54-207ENST00000550016 DYNC2H1Q8NCM8 4307 aaKnown RBP13.61□□□□□ -0.23
DDX54-207ENST00000550016 B4DEV8 164 aa13.61□□□□□ -0.23
DDX54-207ENST00000550016 LY6G6CO95867 125 aa13.61□□□□□ -0.23
DDX54-207ENST00000550016 LGALS9CQ6DKI2 356 aa13.61□□□□□ -0.23
DDX54-207ENST00000550016 KRBOX1C9JBD0 128 aa13.6□□□□□ -0.23
DDX54-207ENST00000550016 OR5I1Q13606 314 aa13.6□□□□□ -0.23
DDX54-207ENST00000550016 ZNF506Q5JVG8 444 aa13.6□□□□□ -0.23
DDX54-207ENST00000550016 C9orf85Q96MD7 179 aa13.6□□□□□ -0.23
DDX54-207ENST00000550016 RAB19A4D1S5 217 aa13.59□□□□□ -0.23
DDX54-207ENST00000550016 RNASE3P12724 160 aaKnown RBP13.59□□□□□ -0.23
DDX54-207ENST00000550016 HOXA5P20719 270 aa13.59□□□□□ -0.23
DDX54-207ENST00000550016 CENPWQ5EE01 88 aa13.59□□□□□ -0.23
DDX54-207ENST00000550016 C15orf53Q8NAA6 179 aa13.59□□□□□ -0.23
DDX54-207ENST00000550016 M0R036 132 aa13.58□□□□□ -0.24
DDX54-207ENST00000550016 S100A4P26447 101 aaKnown RBP13.58□□□□□ -0.24
DDX54-207ENST00000550016 ASIPP42127 132 aa13.58□□□□□ -0.24
DDX54-207ENST00000550016 GNG4P50150 75 aa13.58□□□□□ -0.24
DDX54-207ENST00000550016 LINC01559Q495D7 138 aa13.58□□□□□ -0.24
DDX54-207ENST00000550016 DNLZQ5SXM8 178 aa13.58□□□□□ -0.24
DDX54-207ENST00000550016 PTH2Q96A98 100 aa13.57□□□□□ -0.24
DDX54-207ENST00000550016 SMIM12Q96EX1 92 aa13.57□□□□□ -0.24
DDX54-207ENST00000550016 EIF5A2Q9GZV4 153 aaKnown RBP13.57□□□□□ -0.24
DDX54-207ENST00000550016 TRAV26-1A0A087WT03 109 aa13.56□□□□□ -0.24
DDX54-207ENST00000550016 TMEM250H0YL14 139 aa13.56□□□□□ -0.24
DDX54-207ENST00000550016 IGLV2-8P01709 118 aa13.56□□□□□ -0.24
DDX54-207ENST00000550016 IGHV3-53P01767 116 aa13.56□□□□□ -0.24
DDX54-207ENST00000550016 ZNF876PQ49A33 203 aa13.56□□□□□ -0.24
DDX54-207ENST00000550016 TOR2AQ5JU69 321 aa13.56□□□□□ -0.24
DDX54-207ENST00000550016 PRR27Q6MZM9 219 aa13.56□□□□□ -0.24
DDX54-207ENST00000550016 ZNF575Q86XF7 245 aa13.56□□□□□ -0.24
DDX54-207ENST00000550016 FAM210AQ96ND0 272 aa13.56□□□□□ -0.24
DDX54-207ENST00000550016 IL36BQ9NZH7 164 aa13.56□□□□□ -0.24
DDX54-207ENST00000550016 TRAV4A0A0B4J268 109 aa13.55□□□□□ -0.24
DDX54-207ENST00000550016 GRIFINA4D1Z8 144 aa13.55□□□□□ -0.24
DDX54-207ENST00000550016 C9JCJ5 164 aa13.55□□□□□ -0.24
DDX54-207ENST00000550016 NDUFS6O75380 124 aaKnown RBP13.55□□□□□ -0.24
DDX54-207ENST00000550016 MGST1P10620 155 aaKnown RBP13.55□□□□□ -0.24
DDX54-207ENST00000550016 POM121L12Q8N7R1 296 aa13.55□□□□□ -0.24
DDX54-207ENST00000550016 KMT2CQ8NEZ4 4911 aaKnown RBP13.54□□□□□ -0.24
DDX54-207ENST00000550016 TRBV20OR9-2A0A075B6H5 130 aa13.54□□□□□ -0.24
DDX54-207ENST00000550016 TMSB15BA0A087X1C1 80 aa13.54□□□□□ -0.24
DDX54-207ENST00000550016 PGPEP1LA6NFU8 196 aa13.54□□□□□ -0.24
DDX54-207ENST00000550016 H3BNG1 76 aa13.54□□□□□ -0.24
DDX54-207ENST00000550016 NUDT3O95989 172 aa13.54□□□□□ -0.24
DDX54-207ENST00000550016 P0DMU3 169 aa13.54□□□□□ -0.24
DDX54-207ENST00000550016 FAM231AP0DMU4 169 aa13.54□□□□□ -0.24
DDX54-207ENST00000550016 FAM231CP0DMU5 169 aa13.54□□□□□ -0.24
DDX54-207ENST00000550016 SLAQ13239 276 aa13.54□□□□□ -0.24
DDX54-207ENST00000550016 FHL2Q14192 279 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms