RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 GYPEP15421 78 aa9.8□□□□□ -0.84
COL2A1-209ENST00000546974 CDC34P49427 236 aaPredicted RBP9.8□□□□□ -0.84
COL2A1-209ENST00000546974 NFE4Q86UQ8 179 aa9.8□□□□□ -0.84
COL2A1-209ENST00000546974 OR4C5Q8NGB2 326 aa9.8□□□□□ -0.84
COL2A1-209ENST00000546974 KCNS1Q96KK3 526 aa9.8□□□□□ -0.84
COL2A1-209ENST00000546974 PSMG3Q9BT73 122 aaPredicted RBP9.8□□□□□ -0.84
COL2A1-209ENST00000546974 SDF2L1Q9HCN8 221 aa9.8□□□□□ -0.84
COL2A1-209ENST00000546974 VPS13BQ7Z7G8 4022 aa9.79□□□□□ -0.84
COL2A1-209ENST00000546974 C9JCJ5 164 aa9.79□□□□□ -0.84
COL2A1-209ENST00000546974 F6UZH7 168 aa9.79□□□□□ -0.84
COL2A1-209ENST00000546974 K7EP13 123 aa9.79□□□□□ -0.84
COL2A1-209ENST00000546974 TYMSP04818 313 aa9.79□□□□□ -0.84
COL2A1-209ENST00000546974 ARL14EPLP0DKL9 152 aa9.79□□□□□ -0.84
COL2A1-209ENST00000546974 GNG5P63218 68 aa9.79□□□□□ -0.84
COL2A1-209ENST00000546974 SUN5Q8TC36 379 aa9.79□□□□□ -0.84
COL2A1-209ENST00000546974 AQP10Q96PS8 301 aa9.79□□□□□ -0.84
COL2A1-209ENST00000546974 TXNDC17Q9BRA2 123 aa9.79□□□□□ -0.84
COL2A1-209ENST00000546974 LY96Q9Y6Y9 160 aa9.79□□□□□ -0.84
COL2A1-209ENST00000546974 EREGO14944 169 aa9.78□□□□□ -0.84
COL2A1-209ENST00000546974 MBP02144 154 aa9.78□□□□□ -0.84
COL2A1-209ENST00000546974 SERF2P84101 59 aa9.78□□□□□ -0.84
COL2A1-209ENST00000546974 HSD17B11Q8NBQ5 300 aa9.78□□□□□ -0.84
COL2A1-209ENST00000546974 RAB24Q969Q5 203 aa9.78□□□□□ -0.84
COL2A1-209ENST00000546974 NDFIP1Q9BT67 221 aa9.78□□□□□ -0.84
COL2A1-209ENST00000546974 PGPEP1Q9NXJ5 209 aa9.78□□□□□ -0.84
COL2A1-209ENST00000546974 PTTG1O95997 202 aa9.77□□□□□ -0.85
COL2A1-209ENST00000546974 TCRAP04437 139 aa9.77□□□□□ -0.85
COL2A1-209ENST00000546974 ATP6V0CP27449 155 aa9.77□□□□□ -0.85
COL2A1-209ENST00000546974 GCHFRP30047 84 aa9.77□□□□□ -0.85
COL2A1-209ENST00000546974 ERVFC1-1P60608 527 aa9.77□□□□□ -0.85
COL2A1-209ENST00000546974 SH2D6Q7Z4S9 175 aa9.77□□□□□ -0.85
COL2A1-209ENST00000546974 Q8N1X5 172 aa9.77□□□□□ -0.85
COL2A1-209ENST00000546974 C5orf17Q8NAS9 161 aa9.77□□□□□ -0.85
COL2A1-209ENST00000546974 ASB13Q8WXK3 278 aa9.77□□□□□ -0.85
COL2A1-209ENST00000546974 MED28Q9H204 178 aa9.77□□□□□ -0.85
COL2A1-209ENST00000546974 TNFRSF18Q9Y5U5 241 aa9.77□□□□□ -0.85
COL2A1-209ENST00000546974 K7EQM0 130 aa9.76□□□□□ -0.85
COL2A1-209ENST00000546974 DNAH10OSP0CZ25 163 aa9.76□□□□□ -0.85
COL2A1-209ENST00000546974 EVI2AP22794 236 aa9.76□□□□□ -0.85
COL2A1-209ENST00000546974 WFDC10BQ8IUB3 73 aa9.76□□□□□ -0.85
COL2A1-209ENST00000546974 SGK494Q96LW2 274 aa9.76□□□□□ -0.85
COL2A1-209ENST00000546974 TMEM167BQ9NRX6 74 aa9.76□□□□□ -0.85
COL2A1-209ENST00000546974 TAAR5O14804 337 aa9.75□□□□□ -0.85
COL2A1-209ENST00000546974 CIDEAO60543 219 aa9.75□□□□□ -0.85
COL2A1-209ENST00000546974 CXorf1O96002 111 aa9.75□□□□□ -0.85
COL2A1-209ENST00000546974 GATA1P15976 413 aaPredicted RBP9.75□□□□□ -0.85
COL2A1-209ENST00000546974 ZNF80P51504 273 aaPredicted RBP9.75□□□□□ -0.85
COL2A1-209ENST00000546974 TIRAPP58753 221 aa9.75□□□□□ -0.85
COL2A1-209ENST00000546974 MSRB1Q9NZV6 116 aa9.75□□□□□ -0.85
COL2A1-209ENST00000546974 TNFSF18Q9UNG2 199 aa9.75□□□□□ -0.85
COL2A1-209ENST00000546974 PSG8Q9UQ74 426 aa9.75□□□□□ -0.85
COL2A1-209ENST00000546974 DNAH8Q96JB1 4490 aa9.75□□□□□ -0.85
COL2A1-209ENST00000546974 FAT1Q14517 4588 aa9.74□□□□□ -0.85
COL2A1-209ENST00000546974 LOC100131303A0A0U1RQF7 123 aa9.74□□□□□ -0.85
COL2A1-209ENST00000546974 FBLL1A6NHQ2 334 aaKnown RBP9.74□□□□□ -0.85
COL2A1-209ENST00000546974 GCGP01275 180 aa9.74□□□□□ -0.85
COL2A1-209ENST00000546974 SUMO1P63165 101 aaKnown RBP9.74□□□□□ -0.85
COL2A1-209ENST00000546974 ZNF876PQ49A33 203 aa9.74□□□□□ -0.85
COL2A1-209ENST00000546974 CDPF1Q6NVV7 123 aa9.74□□□□□ -0.85
COL2A1-209ENST00000546974 ACTR3CQ9C0K3 210 aaPredicted RBP9.74□□□□□ -0.85
COL2A1-209ENST00000546974 SCRT2Q9NQ03 307 aa9.74□□□□□ -0.85
COL2A1-209ENST00000546974 C11orf21Q9P2W6 132 aa9.74□□□□□ -0.85
COL2A1-209ENST00000546974 EPDR1Q9UM22 224 aa9.74□□□□□ -0.85
COL2A1-209ENST00000546974 A0A087WTM6 91 aa9.73□□□□□ -0.85
COL2A1-209ENST00000546974 GGTLC3B5MD39 225 aa9.73□□□□□ -0.85
COL2A1-209ENST00000546974 RS1O15537 224 aa9.73□□□□□ -0.85
COL2A1-209ENST00000546974 IGLV2-11P01706 119 aa9.73□□□□□ -0.85
COL2A1-209ENST00000546974 PFN1P07737 140 aaKnown RBP9.73□□□□□ -0.85
COL2A1-209ENST00000546974 GIPP09681 153 aaPredicted RBP9.73□□□□□ -0.85
COL2A1-209ENST00000546974 FLI1Q01543 452 aaPredicted RBP9.73□□□□□ -0.85
COL2A1-209ENST00000546974 RGS21Q2M5E4 152 aa9.73□□□□□ -0.85
COL2A1-209ENST00000546974 SMUG1Q53HV7 270 aa9.73□□□□□ -0.85
COL2A1-209ENST00000546974 Q5BKY6 102 aa9.73□□□□□ -0.85
COL2A1-209ENST00000546974 C10orf126Q8N4M7 172 aa9.73□□□□□ -0.85
COL2A1-209ENST00000546974 CYB561D1Q8N8Q1 229 aa9.73□□□□□ -0.85
COL2A1-209ENST00000546974 TMEM75Q8N9X5 138 aa9.73□□□□□ -0.85
COL2A1-209ENST00000546974 PTH2Q96A98 100 aa9.73□□□□□ -0.85
COL2A1-209ENST00000546974 SH3BGRL3Q9H299 93 aa9.73□□□□□ -0.85
COL2A1-209ENST00000546974 A0A1W2PRE2 83 aa9.72□□□□□ -0.85
COL2A1-209ENST00000546974 CRYGDP07320 174 aa9.72□□□□□ -0.85
COL2A1-209ENST00000546974 ZFP69Q49AA0 526 aa9.72□□□□□ -0.85
COL2A1-209ENST00000546974 CFAP126Q5VTH2 177 aa9.72□□□□□ -0.85
COL2A1-209ENST00000546974 PRNTQ86SH4 94 aa9.72□□□□□ -0.85
COL2A1-209ENST00000546974 SLC25A29Q8N8R3 303 aa9.72□□□□□ -0.85
COL2A1-209ENST00000546974 NHLRC2Q8NBF2 726 aa9.72□□□□□ -0.85
COL2A1-209ENST00000546974 INO80EQ8NBZ0 244 aaPredicted RBP9.72□□□□□ -0.85
COL2A1-209ENST00000546974 C9orf85Q96MD7 179 aa9.72□□□□□ -0.85
COL2A1-209ENST00000546974 BOLA1Q9Y3E2 137 aa9.72□□□□□ -0.85
COL2A1-209ENST00000546974 TRBV6-4A0A1B0GX49 114 aa9.71□□□□□ -0.86
COL2A1-209ENST00000546974 PPT1P50897 306 aa9.71□□□□□ -0.86
COL2A1-209ENST00000546974 RHOHQ15669 191 aa9.71□□□□□ -0.86
COL2A1-209ENST00000546974 SAPCD1Q5SSQ6 148 aa9.71□□□□□ -0.86
COL2A1-209ENST00000546974 DPPA3Q6W0C5 159 aa9.71□□□□□ -0.86
COL2A1-209ENST00000546974 PRADC1Q9BSG0 188 aa9.71□□□□□ -0.86
COL2A1-209ENST00000546974 BORCS7-ASMTA0A0B4J1R7 106 aa9.7□□□□□ -0.86
COL2A1-209ENST00000546974 IGHV3-38A0A0C4DH36 116 aa9.7□□□□□ -0.86
COL2A1-209ENST00000546974 RNF222A6NCQ9 220 aa9.7□□□□□ -0.86
COL2A1-209ENST00000546974 PGPEP1LA6NFU8 196 aa9.7□□□□□ -0.86
COL2A1-209ENST00000546974 RNASE3P12724 160 aaKnown RBP9.7□□□□□ -0.86
COL2A1-209ENST00000546974 FUSP35637 526 aaKnown RBP eCLIP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms