RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 OR2D3Q8NGH3 330 aa12.33□□□□□ -0.44
CADM1-220ENST00000546000 B4DEV8 164 aa12.32□□□□□ -0.44
CADM1-220ENST00000546000 GNRH2O43555 120 aa12.32□□□□□ -0.44
CADM1-220ENST00000546000 SPRY2O43597 315 aa12.32□□□□□ -0.44
CADM1-220ENST00000546000 GATCO43716 136 aaKnown RBP12.32□□□□□ -0.44
CADM1-220ENST00000546000 TYMSP04818 313 aa12.32□□□□□ -0.44
CADM1-220ENST00000546000 AZU1P20160 251 aa12.32□□□□□ -0.44
CADM1-220ENST00000546000 LINC01559Q495D7 138 aa12.32□□□□□ -0.44
CADM1-220ENST00000546000 ZNF705AQ6ZN79 300 aaPredicted RBP12.32□□□□□ -0.44
CADM1-220ENST00000546000 DAZAP1Q96EP5 407 aaKnown RBP12.32□□□□□ -0.44
CADM1-220ENST00000546000 RPP21Q9H633 154 aaKnown RBP12.32□□□□□ -0.44
CADM1-220ENST00000546000 V9GYV3 84 aa12.32□□□□□ -0.44
CADM1-220ENST00000546000 X6R8D5 127 aa12.32□□□□□ -0.44
CADM1-220ENST00000546000 DNAH9Q9NYC9 4486 aa12.32□□□□□ -0.44
CADM1-220ENST00000546000 PRKDCP78527 4128 aaKnown RBP12.32□□□□□ -0.44
CADM1-220ENST00000546000 HUWE1Q7Z6Z7 4374 aaKnown RBP12.31□□□□□ -0.44
CADM1-220ENST00000546000 TMEM189A5PLL7 270 aa12.31□□□□□ -0.44
CADM1-220ENST00000546000 H7BYZ3 331 aa12.31□□□□□ -0.44
CADM1-220ENST00000546000 UBE2CO00762 179 aa12.31□□□□□ -0.44
CADM1-220ENST00000546000 FAM231DQ6ZW35 169 aa12.31□□□□□ -0.44
CADM1-220ENST00000546000 OR10G8Q8NGN5 311 aa12.31□□□□□ -0.44
CADM1-220ENST00000546000 RCHY1Q96PM5 261 aa12.31□□□□□ -0.44
CADM1-220ENST00000546000 C20orf144Q9BQM9 153 aa12.31□□□□□ -0.44
CADM1-220ENST00000546000 BIN3Q9NQY0 253 aa12.31□□□□□ -0.44
CADM1-220ENST00000546000 OSTCQ9NRP0 149 aa12.31□□□□□ -0.44
CADM1-220ENST00000546000 CBY3A6NI87 242 aa12.3□□□□□ -0.44
CADM1-220ENST00000546000 FAM159AQ6UWV7 190 aa12.3□□□□□ -0.44
CADM1-220ENST00000546000 RNF183Q96D59 192 aa12.3□□□□□ -0.44
CADM1-220ENST00000546000 OVOL2Q9BRP0 275 aa12.3□□□□□ -0.44
CADM1-220ENST00000546000 PYGO2Q9BRQ0 406 aa12.3□□□□□ -0.44
CADM1-220ENST00000546000 TIMM8BQ9Y5J9 83 aaPredicted RBP12.3□□□□□ -0.44
CADM1-220ENST00000546000 C7orf77A4D0Y5 90 aa12.29□□□□□ -0.44
CADM1-220ENST00000546000 TCL1AP56279 114 aa12.29□□□□□ -0.44
CADM1-220ENST00000546000 Q6ZWC4 215 aa12.29□□□□□ -0.44
CADM1-220ENST00000546000 TMEM256Q8N2U0 113 aa12.29□□□□□ -0.44
CADM1-220ENST00000546000 SVBPQ8N300 66 aa12.29□□□□□ -0.44
CADM1-220ENST00000546000 OR11H2Q8NH07 326 aa12.29□□□□□ -0.44
CADM1-220ENST00000546000 NBEAL2Q6ZNJ1 2754 aa12.28□□□□□ -0.44
CADM1-220ENST00000546000 H3BVH4 76 aa12.28□□□□□ -0.44
CADM1-220ENST00000546000 C15orf54Q8N8G6 183 aa12.28□□□□□ -0.44
CADM1-220ENST00000546000 MDFICQ9P1T7 246 aa12.28□□□□□ -0.44
CADM1-220ENST00000546000 IGHV3-16A0A0C4DH30 117 aa12.27□□□□□ -0.45
CADM1-220ENST00000546000 MUC21A0A0G2JKD1 596 aa12.27□□□□□ -0.45
CADM1-220ENST00000546000 MUC21A0A140T8X8 626 aa12.27□□□□□ -0.45
CADM1-220ENST00000546000 DEFB4AO15263 64 aa12.27□□□□□ -0.45
CADM1-220ENST00000546000 TDRG1Q3Y452 100 aa12.27□□□□□ -0.45
CADM1-220ENST00000546000 RPS10P5Q9NQ39 176 aa12.27□□□□□ -0.45
CADM1-220ENST00000546000 SNAPINO95295 136 aa12.26□□□□□ -0.45
CADM1-220ENST00000546000 MT-ND4LP03901 98 aa12.26□□□□□ -0.45
CADM1-220ENST00000546000 RRN3P1Q2M238 152 aa12.26□□□□□ -0.45
CADM1-220ENST00000546000 C11orf72Q8NBR9 251 aa12.26□□□□□ -0.45
CADM1-220ENST00000546000 RNASE8Q8TDE3 154 aaKnown RBP12.26□□□□□ -0.45
CADM1-220ENST00000546000 GTSF1Q8WW33 167 aa12.26□□□□□ -0.45
CADM1-220ENST00000546000 TM2D3Q9BRN9 247 aa12.26□□□□□ -0.45
CADM1-220ENST00000546000 LINC00467Q9BRT7 94 aa12.26□□□□□ -0.45
CADM1-220ENST00000546000 TPPP3Q9BW30 176 aa12.26□□□□□ -0.45
CADM1-220ENST00000546000 GSN-AS1Q9NRJ2 163 aa12.26□□□□□ -0.45
CADM1-220ENST00000546000 TRGV11A0A075B6L2 103 aa12.25□□□□□ -0.45
CADM1-220ENST00000546000 IGHV4-28A0A0C4DH34 117 aa12.25□□□□□ -0.45
CADM1-220ENST00000546000 PLAC8L1A1L4L8 177 aa12.25□□□□□ -0.45
CADM1-220ENST00000546000 RNASE3P12724 160 aaKnown RBP12.25□□□□□ -0.45
CADM1-220ENST00000546000 ASIPP42127 132 aa12.25□□□□□ -0.45
CADM1-220ENST00000546000 RHEBQ15382 184 aa12.25□□□□□ -0.45
CADM1-220ENST00000546000 Q8NAQ8 132 aa12.25□□□□□ -0.45
CADM1-220ENST00000546000 KCNS1Q96KK3 526 aa12.25□□□□□ -0.45
CADM1-220ENST00000546000 NEU1Q99519 415 aa12.25□□□□□ -0.45
CADM1-220ENST00000546000 B9D2Q9BPU9 175 aa12.25□□□□□ -0.45
CADM1-220ENST00000546000 SCO1O75880 301 aa12.24□□□□□ -0.45
CADM1-220ENST00000546000 EMP1P54849 157 aa12.24□□□□□ -0.45
CADM1-220ENST00000546000 TENM3Q9P273 2699 aa12.24□□□□□ -0.45
CADM1-220ENST00000546000 ARMS2P0C7Q2 107 aa12.23□□□□□ -0.45
CADM1-220ENST00000546000 IGLC6P0CF74 106 aa12.23□□□□□ -0.45
CADM1-220ENST00000546000 S100A4P26447 101 aaKnown RBP12.23□□□□□ -0.45
CADM1-220ENST00000546000 RPS20P60866 119 aaKnown RBP12.23□□□□□ -0.45
CADM1-220ENST00000546000 SSTP61278 116 aa12.23□□□□□ -0.45
CADM1-220ENST00000546000 ZNF415Q09FC8 603 aa12.23□□□□□ -0.45
CADM1-220ENST00000546000 CT83Q5H943 113 aa12.23□□□□□ -0.45
CADM1-220ENST00000546000 FER1L6-AS1Q8NA97 138 aa12.23□□□□□ -0.45
CADM1-220ENST00000546000 IL17DQ8TAD2 202 aa12.23□□□□□ -0.45
CADM1-220ENST00000546000 TSKUQ8WUA8 353 aa12.23□□□□□ -0.45
CADM1-220ENST00000546000 TMEM263Q8WUH6 116 aaKnown RBP12.23□□□□□ -0.45
CADM1-220ENST00000546000 ANAPC16Q96DE5 110 aa12.23□□□□□ -0.45
CADM1-220ENST00000546000 PGLYRP4Q96LB8 373 aa12.23□□□□□ -0.45
CADM1-220ENST00000546000 C9orf85Q96MD7 179 aa12.23□□□□□ -0.45
CADM1-220ENST00000546000 SPATA25Q9BR10 227 aa12.23□□□□□ -0.45
CADM1-220ENST00000546000 TP53TG1Q9Y2A0 90 aa12.23□□□□□ -0.45
CADM1-220ENST00000546000 PPP1R2P9O14990 202 aa12.22□□□□□ -0.45
CADM1-220ENST00000546000 CXCL1P09341 107 aa12.22□□□□□ -0.45
CADM1-220ENST00000546000 CBLN2Q8IUK8 224 aa12.22□□□□□ -0.45
CADM1-220ENST00000546000 OR10AG1Q8NH19 301 aa12.22□□□□□ -0.45
CADM1-220ENST00000546000 IL36BQ9NZH7 164 aa12.22□□□□□ -0.45
CADM1-220ENST00000546000 A0A087WWC5 75 aa12.21□□□□□ -0.45
CADM1-220ENST00000546000 A8MWL6 223 aa12.21□□□□□ -0.45
CADM1-220ENST00000546000 SPINK4O60575 86 aa12.21□□□□□ -0.45
CADM1-220ENST00000546000 LYZL1Q6UWQ5 148 aa12.21□□□□□ -0.45
CADM1-220ENST00000546000 C16orf74Q96GX8 76 aa12.21□□□□□ -0.45
CADM1-220ENST00000546000 MRPL16Q9NX20 251 aaKnown RBP12.21□□□□□ -0.45
CADM1-220ENST00000546000 SMIM27A0A1W2PRY6 76 aa12.2□□□□□ -0.46
CADM1-220ENST00000546000 XKRY2A2RUG3 117 aa12.2□□□□□ -0.46
CADM1-220ENST00000546000 HIGD1CA8MV81 97 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms