RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 RPL11P62913 178 aaKnown RBP13.36□□□□□ -0.27
SCARB1-208ENST00000544327 NRGNQ92686 78 aa13.36□□□□□ -0.27
SCARB1-208ENST00000544327 DOPEY1Q5JWR5 2465 aa13.36□□□□□ -0.27
SCARB1-208ENST00000544327 SIVA1O15304 175 aa13.36□□□□□ -0.27
SCARB1-208ENST00000544327 ATP5LO75964 103 aa13.36□□□□□ -0.27
SCARB1-208ENST00000544327 KIR3DS1Q14943 382 aa13.36□□□□□ -0.27
SCARB1-208ENST00000544327 ODF1Q14990 250 aa13.36□□□□□ -0.27
SCARB1-208ENST00000544327 ANXA2RQ3ZCQ2 193 aa13.36□□□□□ -0.27
SCARB1-208ENST00000544327 TMEM158Q8WZ71 300 aa13.36□□□□□ -0.27
SCARB1-208ENST00000544327 ID1P41134 155 aa13.35□□□□□ -0.27
SCARB1-208ENST00000544327 LAGE3Q14657 143 aa13.35□□□□□ -0.27
SCARB1-208ENST00000544327 OR9G4Q8NGQ1 327 aa13.35□□□□□ -0.27
SCARB1-208ENST00000544327 DKK2Q9UBU2 259 aa13.35□□□□□ -0.27
SCARB1-208ENST00000544327 KLLNB2CW77 178 aa13.34□□□□□ -0.27
SCARB1-208ENST00000544327 CD5LO43866 347 aa13.34□□□□□ -0.27
SCARB1-208ENST00000544327 NXPH4O95158 308 aa13.34□□□□□ -0.27
SCARB1-208ENST00000544327 DEFB1P60022 68 aa13.34□□□□□ -0.27
SCARB1-208ENST00000544327 TMEM95Q3KNT9 176 aa13.34□□□□□ -0.27
SCARB1-208ENST00000544327 DCANP1Q8TF63 244 aa13.34□□□□□ -0.27
SCARB1-208ENST00000544327 C18orf15Q96N68 181 aa13.34□□□□□ -0.27
SCARB1-208ENST00000544327 DPH3P1Q9H4G8 78 aa13.34□□□□□ -0.27
SCARB1-208ENST00000544327 TRAV26-2A0A0B4J265 109 aa13.34□□□□□ -0.27
SCARB1-208ENST00000544327 F6UB75 175 aa13.34□□□□□ -0.27
SCARB1-208ENST00000544327 TAX1BP3O14907 124 aa13.34□□□□□ -0.27
SCARB1-208ENST00000544327 FSHBP01225 129 aa13.34□□□□□ -0.27
SCARB1-208ENST00000544327 RNASE4P34096 147 aaKnown RBP13.34□□□□□ -0.27
SCARB1-208ENST00000544327 WFDC3Q8IUB2 231 aa13.34□□□□□ -0.27
SCARB1-208ENST00000544327 J3KRW8 73 aa13.33□□□□□ -0.28
SCARB1-208ENST00000544327 M0R381 172 aa13.33□□□□□ -0.28
SCARB1-208ENST00000544327 SMIM17P0DL12 118 aa13.33□□□□□ -0.28
SCARB1-208ENST00000544327 S100A4P26447 101 aaKnown RBP13.33□□□□□ -0.28
SCARB1-208ENST00000544327 SRSF1Q07955 248 aaKnown RBP eCLIP13.33□□□□□ -0.283e-6■□□□□ 9
SCARB1-208ENST00000544327 POM121L12Q8N7R1 296 aa13.33□□□□□ -0.28
SCARB1-208ENST00000544327 C20orf78Q9BR46 151 aa13.33□□□□□ -0.28
SCARB1-208ENST00000544327 SMIM2Q9BVW6 85 aa13.33□□□□□ -0.28
SCARB1-208ENST00000544327 PIEZO1Q92508 2521 aa13.33□□□□□ -0.28
SCARB1-208ENST00000544327 COX6B1P14854 86 aa13.32□□□□□ -0.28
SCARB1-208ENST00000544327 UBE2V1Q13404 147 aa13.32□□□□□ -0.28
SCARB1-208ENST00000544327 Q6ZVH6 145 aa13.32□□□□□ -0.28
SCARB1-208ENST00000544327 ODF3Q96PU9 254 aa13.32□□□□□ -0.28
SCARB1-208ENST00000544327 PHLDA3Q9Y5J5 127 aa13.32□□□□□ -0.28
SCARB1-208ENST00000544327 K7EMI3 77 aa13.32□□□□□ -0.28
SCARB1-208ENST00000544327 RNASE3P12724 160 aaKnown RBP13.32□□□□□ -0.28
SCARB1-208ENST00000544327 SEC11AP67812 179 aa13.32□□□□□ -0.28
SCARB1-208ENST00000544327 TMEM97Q5BJF2 176 aa13.32□□□□□ -0.28
SCARB1-208ENST00000544327 SVEP1Q4LDE5 3571 aa13.31□□□□□ -0.28
SCARB1-208ENST00000544327 PRSS1P07477 247 aa13.31□□□□□ -0.28
SCARB1-208ENST00000544327 EDN2P20800 178 aa13.31□□□□□ -0.28
SCARB1-208ENST00000544327 MYOZ3Q8TDC0 251 aa13.31□□□□□ -0.28
SCARB1-208ENST00000544327 HHLA3Q9XRX5 114 aa13.31□□□□□ -0.28
SCARB1-208ENST00000544327 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.31□□□□□ -0.285e-7■■□□□ 13.6
SCARB1-208ENST00000544327 IGKV3-7A0A075B6H7 116 aa13.3□□□□□ -0.28
SCARB1-208ENST00000544327 CCL25O15444 150 aa13.3□□□□□ -0.28
SCARB1-208ENST00000544327 RASL10AQ92737 203 aa13.3□□□□□ -0.28
SCARB1-208ENST00000544327 VPREB3Q9UKI3 123 aa13.3□□□□□ -0.28
SCARB1-208ENST00000544327 A1L4Q6 167 aa13.29□□□□□ -0.28
SCARB1-208ENST00000544327 TGFAP01135 160 aa13.29□□□□□ -0.28
SCARB1-208ENST00000544327 IGKCP01834 107 aa13.29□□□□□ -0.28
SCARB1-208ENST00000544327 FOXC2Q99958 501 aa13.29□□□□□ -0.28
SCARB1-208ENST00000544327 GNRH2O43555 120 aa13.29□□□□□ -0.28
SCARB1-208ENST00000544327 DPM2O94777 84 aa13.29□□□□□ -0.28
SCARB1-208ENST00000544327 PPP1R17O96001 155 aa13.29□□□□□ -0.28
SCARB1-208ENST00000544327 HLA-DRB4P13762 266 aa13.29□□□□□ -0.28
SCARB1-208ENST00000544327 PTTG1IPP53801 180 aa13.29□□□□□ -0.28
SCARB1-208ENST00000544327 SUMO2P61956 95 aaKnown RBP13.29□□□□□ -0.28
SCARB1-208ENST00000544327 HSD52Q0P140 79 aa13.29□□□□□ -0.28
SCARB1-208ENST00000544327 ORMDL2Q53FV1 153 aa13.29□□□□□ -0.28
SCARB1-208ENST00000544327 AP1S3Q96PC3 154 aa13.29□□□□□ -0.28
SCARB1-208ENST00000544327 HLA-DRB4X5D2U9 266 aa13.29□□□□□ -0.28
SCARB1-208ENST00000544327 CFAP46Q8IYW2 2715 aa13.29□□□□□ -0.28
SCARB1-208ENST00000544327 LGALS9O00182 355 aa13.28□□□□□ -0.28
SCARB1-208ENST00000544327 ELANEP08246 267 aa13.28□□□□□ -0.28
SCARB1-208ENST00000544327 SRD5A1P18405 259 aa13.28□□□□□ -0.28
SCARB1-208ENST00000544327 Q6YL49 198 aa13.28□□□□□ -0.28
SCARB1-208ENST00000544327 SPTAN1Q13813 2472 aaKnown RBP13.28□□□□□ -0.28
SCARB1-208ENST00000544327 LGALS1P09382 135 aaKnown RBP13.27□□□□□ -0.28
SCARB1-208ENST00000544327 C10orf99Q6UWK7 81 aa13.27□□□□□ -0.28
SCARB1-208ENST00000544327 ADAMTSL5Q6ZMM2 481 aa13.27□□□□□ -0.28
SCARB1-208ENST00000544327 C14orf178Q8N769 122 aaPredicted RBP13.27□□□□□ -0.28
SCARB1-208ENST00000544327 RNF223E7ERA6 249 aa13.27□□□□□ -0.29
SCARB1-208ENST00000544327 IGHV4-31P0DP07 118 aa13.27□□□□□ -0.29
SCARB1-208ENST00000544327 PCP2Q8IVA1 136 aa13.27□□□□□ -0.29
SCARB1-208ENST00000544327 RNF152Q8N8N0 203 aa13.27□□□□□ -0.29
SCARB1-208ENST00000544327 KIF25-AS1Q9Y6Z4 181 aa13.27□□□□□ -0.29
SCARB1-208ENST00000544327 A0A087WX48 190 aa13.26□□□□□ -0.29
SCARB1-208ENST00000544327 TRAV12-1A0A0B4J245 112 aa13.26□□□□□ -0.29
SCARB1-208ENST00000544327 K7EQG2 157 aa13.26□□□□□ -0.29
SCARB1-208ENST00000544327 NMUP48645 174 aa13.26□□□□□ -0.29
SCARB1-208ENST00000544327 RPL32P62910 135 aaKnown RBP13.26□□□□□ -0.29
SCARB1-208ENST00000544327 TOMM6Q96B49 74 aa13.26□□□□□ -0.29
SCARB1-208ENST00000544327 ZNF702PQ9H963 129 aa13.26□□□□□ -0.29
SCARB1-208ENST00000544327 HIGD1BQ9P298 99 aa13.26□□□□□ -0.29
SCARB1-208ENST00000544327 ZFHX3Q15911 3703 aa13.26□□□□□ -0.29
SCARB1-208ENST00000544327 FAM159AQ6UWV7 190 aa13.25□□□□□ -0.29
SCARB1-208ENST00000544327 IGSF10Q6WRI0 2623 aa13.25□□□□□ -0.29
SCARB1-208ENST00000544327 CBY3A6NI87 242 aa13.25□□□□□ -0.29
SCARB1-208ENST00000544327 SPRY2O43597 315 aa13.25□□□□□ -0.29
SCARB1-208ENST00000544327 PRB1P04280 392 aa13.25□□□□□ -0.29
SCARB1-208ENST00000544327 LINC00315P59091 139 aa13.25□□□□□ -0.29
SCARB1-208ENST00000544327 BEX4Q9NWD9 120 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms