RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 Q8N8P6 123 aa6.72□□□□□ -1.33
ABCB1-210ENST00000543898 SPANXA1Q9NS26 97 aa6.72□□□□□ -1.33
ABCB1-210ENST00000543898 PTPRBP23467 1997 aa6.72□□□□□ -1.33
ABCB1-210ENST00000543898 FGF6P10767 208 aa6.72□□□□□ -1.33
ABCB1-210ENST00000543898 PLNP26678 52 aa6.72□□□□□ -1.33
ABCB1-210ENST00000543898 NDPQ00604 133 aa6.72□□□□□ -1.33
ABCB1-210ENST00000543898 C14orf178Q8N769 122 aaPredicted RBP6.72□□□□□ -1.33
ABCB1-210ENST00000543898 FAM57AQ8TBR7 257 aa6.72□□□□□ -1.33
ABCB1-210ENST00000543898 C20orf78Q9BR46 151 aa6.72□□□□□ -1.33
ABCB1-210ENST00000543898 A0A0U1RQV1 116 aa6.71□□□□□ -1.33
ABCB1-210ENST00000543898 HTN1P15515 57 aa6.71□□□□□ -1.33
ABCB1-210ENST00000543898 C15orf32Q32M92 178 aa6.71□□□□□ -1.33
ABCB1-210ENST00000543898 OR10J6PQ8NGY7 276 aa6.71□□□□□ -1.33
ABCB1-210ENST00000543898 TEX22C9J3V5 150 aa6.71□□□□□ -1.34
ABCB1-210ENST00000543898 GAS8-AS1O95177 125 aa6.71□□□□□ -1.34
ABCB1-210ENST00000543898 LGALS3P17931 250 aaKnown RBP6.71□□□□□ -1.34
ABCB1-210ENST00000543898 ZNF80P51504 273 aaPredicted RBP6.71□□□□□ -1.34
ABCB1-210ENST00000543898 NEGR1Q7Z3B1 354 aa6.71□□□□□ -1.34
ABCB1-210ENST00000543898 NUP37Q8NFH4 326 aa6.71□□□□□ -1.34
ABCB1-210ENST00000543898 IGHV3-64A0A075B6Q5 118 aa6.71□□□□□ -1.34
ABCB1-210ENST00000543898 CCDC179H3BU77 68 aa6.71□□□□□ -1.34
ABCB1-210ENST00000543898 HLA-DRB4P13762 266 aa6.71□□□□□ -1.34
ABCB1-210ENST00000543898 SLC25A16P16260 332 aa6.71□□□□□ -1.34
ABCB1-210ENST00000543898 DYNAPQ8N1N2 210 aa6.71□□□□□ -1.34
ABCB1-210ENST00000543898 LINC00527Q9UJ94 153 aa6.71□□□□□ -1.34
ABCB1-210ENST00000543898 HLA-DRB4X5D2U9 266 aa6.71□□□□□ -1.34
ABCB1-210ENST00000543898 ADAMTS20P59510 1910 aa6.71□□□□□ -1.34
ABCB1-210ENST00000543898 A0A0G2JNJ9 132 aa6.71□□□□□ -1.34
ABCB1-210ENST00000543898 Q9UFV3 132 aa6.71□□□□□ -1.34
ABCB1-210ENST00000543898 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.7□□□□□ -1.34
ABCB1-210ENST00000543898 A8MWV9 139 aa6.7□□□□□ -1.34
ABCB1-210ENST00000543898 RRN3P1Q2M238 152 aa6.7□□□□□ -1.34
ABCB1-210ENST00000543898 FREM2Q5SZK8 3169 aa6.7□□□□□ -1.34
ABCB1-210ENST00000543898 MYMXA0A1B0GTQ4 84 aa6.7□□□□□ -1.34
ABCB1-210ENST00000543898 TRGV3P03979 118 aa6.7□□□□□ -1.34
ABCB1-210ENST00000543898 RNASE4P34096 147 aaKnown RBP6.7□□□□□ -1.34
ABCB1-210ENST00000543898 ORMDL2Q53FV1 153 aa6.7□□□□□ -1.34
ABCB1-210ENST00000543898 ZNF493Q6ZR52 646 aa6.7□□□□□ -1.34
ABCB1-210ENST00000543898 CFHR4Q92496 578 aa6.7□□□□□ -1.34
ABCB1-210ENST00000543898 TMEM126AQ9H061 195 aa6.7□□□□□ -1.34
ABCB1-210ENST00000543898 RETNQ9HD89 108 aa6.7□□□□□ -1.34
ABCB1-210ENST00000543898 SORL1Q92673 2214 aa6.7□□□□□ -1.34
ABCB1-210ENST00000543898 TNRC6BQ9UPQ9 1833 aaKnown RBP6.69□□□□□ -1.34
ABCB1-210ENST00000543898 A0A096LNJ9 63 aa6.69□□□□□ -1.34
ABCB1-210ENST00000543898 E7EQL1 145 aa6.69□□□□□ -1.34
ABCB1-210ENST00000543898 BRI3O95415 125 aa6.69□□□□□ -1.34
ABCB1-210ENST00000543898 FSTL3O95633 263 aa6.69□□□□□ -1.34
ABCB1-210ENST00000543898 PRADC1Q9BSG0 188 aa6.69□□□□□ -1.34
ABCB1-210ENST00000543898 A0A1W2PRX2 142 aa6.69□□□□□ -1.34
ABCB1-210ENST00000543898 C9JAW5 83 aa6.69□□□□□ -1.34
ABCB1-210ENST00000543898 PRAC2D3DTV9 90 aa6.69□□□□□ -1.34
ABCB1-210ENST00000543898 IGKV3-20P01619 116 aa6.69□□□□□ -1.34
ABCB1-210ENST00000543898 ASIPP42127 132 aa6.69□□□□□ -1.34
ABCB1-210ENST00000543898 MAPKAPK5-AS1Q8N8E1 139 aa6.69□□□□□ -1.34
ABCB1-210ENST00000543898 LINC00574Q9H8X3 128 aa6.69□□□□□ -1.34
ABCB1-210ENST00000543898 CENPVL3A0A0U1RRI6 287 aa6.69□□□□□ -1.34
ABCB1-210ENST00000543898 C3orf36Q3SXR2 165 aa6.69□□□□□ -1.34
ABCB1-210ENST00000543898 LINC01559Q495D7 138 aa6.69□□□□□ -1.34
ABCB1-210ENST00000543898 KIR2DL4Q99706 377 aa6.69□□□□□ -1.34
ABCB1-210ENST00000543898 IGHV3OR16-10A0A075B7F0 116 aa6.69□□□□□ -1.34
ABCB1-210ENST00000543898 A0A087WX48 190 aa6.69□□□□□ -1.34
ABCB1-210ENST00000543898 IGHV4-39P01824 125 aa6.69□□□□□ -1.34
ABCB1-210ENST00000543898 GAGE2AQ6NT46 116 aa6.69□□□□□ -1.34
ABCB1-210ENST00000543898 HIGD1BQ9P298 99 aa6.69□□□□□ -1.34
ABCB1-210ENST00000543898 TRAV2A0A0B4J234 112 aa6.68□□□□□ -1.34
ABCB1-210ENST00000543898 F8VRH5 84 aa6.68□□□□□ -1.34
ABCB1-210ENST00000543898 INSL3P51460 131 aa6.68□□□□□ -1.34
ABCB1-210ENST00000543898 KLHL30-AS1Q8NEE0 82 aa6.68□□□□□ -1.34
ABCB1-210ENST00000543898 SLC50A1Q9BRV3 221 aa6.68□□□□□ -1.34
ABCB1-210ENST00000543898 SPANXB1Q9NS25 103 aaPredicted RBP6.68□□□□□ -1.34
ABCB1-210ENST00000543898 C2orf66Q6UXQ4 117 aa6.68□□□□□ -1.34
ABCB1-210ENST00000543898 TLN1Q9Y490 2541 aaKnown RBP6.68□□□□□ -1.34
ABCB1-210ENST00000543898 EDN2P20800 178 aa6.68□□□□□ -1.34
ABCB1-210ENST00000543898 ZNF672Q499Z4 452 aaPredicted RBP6.68□□□□□ -1.34
ABCB1-210ENST00000543898 RNF5Q99942 180 aa6.68□□□□□ -1.34
ABCB1-210ENST00000543898 KLRB1Q12918 225 aa6.68□□□□□ -1.34
ABCB1-210ENST00000543898 C2CD3Q4AC94 2353 aa6.67□□□□□ -1.34
ABCB1-210ENST00000543898 SRD5A1P18405 259 aa6.67□□□□□ -1.34
ABCB1-210ENST00000543898 HRCT1Q6UXD1 115 aa6.67□□□□□ -1.34
ABCB1-210ENST00000543898 AGPAT4-IT1Q9H0P7 198 aa6.67□□□□□ -1.34
ABCB1-210ENST00000543898 SUMO2P61956 95 aaKnown RBP6.67□□□□□ -1.34
ABCB1-210ENST00000543898 EEF1AKMT3Q96AZ1 226 aa6.67□□□□□ -1.34
ABCB1-210ENST00000543898 LOC107984640A0A0U1RRK4 108 aa6.67□□□□□ -1.34
ABCB1-210ENST00000543898 E9PLD3 99 aa6.67□□□□□ -1.34
ABCB1-210ENST00000543898 IGHV3-11P01762 117 aa6.66□□□□□ -1.34
ABCB1-210ENST00000543898 TAL2Q16559 108 aa6.66□□□□□ -1.34
ABCB1-210ENST00000543898 Q6ZUT4 128 aa6.66□□□□□ -1.34
ABCB1-210ENST00000543898 SMIM2Q9BVW6 85 aa6.66□□□□□ -1.34
ABCB1-210ENST00000543898 NACAE9PAV3 2078 aa6.66□□□□□ -1.34
ABCB1-210ENST00000543898 ZNF56Q15929 161 aa6.66□□□□□ -1.34
ABCB1-210ENST00000543898 IGLV1-47P01700 117 aa6.66□□□□□ -1.34
ABCB1-210ENST00000543898 TRBV6-1A0A0K0K1D8 114 aa6.66□□□□□ -1.34
ABCB1-210ENST00000543898 G3V318 75 aa6.66□□□□□ -1.34
ABCB1-210ENST00000543898 C8orf31Q8N9H6 132 aa6.66□□□□□ -1.34
ABCB1-210ENST00000543898 SIRPDQ9H106 197 aa6.66□□□□□ -1.34
ABCB1-210ENST00000543898 NDUFV3P56181 108 aaKnown RBP6.65□□□□□ -1.34
ABCB1-210ENST00000543898 FOXI1Q12951 378 aa6.65□□□□□ -1.34
ABCB1-210ENST00000543898 RPL39LQ96EH5 51 aaKnown RBP6.65□□□□□ -1.34
ABCB1-210ENST00000543898 CSPG4Q6UVK1 2322 aa6.65□□□□□ -1.34
ABCB1-210ENST00000543898 TRAV21A0A0B4J279 112 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms