RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 TRGV4A0A0C4DH28 118 aa15.26■□□□□ 0.03
SUDS3-204ENST00000543473 ZNF415Q09FC8 603 aa15.26■□□□□ 0.03
SUDS3-204ENST00000543473 BOD1L2Q8IYS8 172 aa15.26■□□□□ 0.03
SUDS3-204ENST00000543473 SPRY4Q9C004 299 aa15.26■□□□□ 0.03
SUDS3-204ENST00000543473 ADAMTS9Q9P2N4 1935 aa15.25■□□□□ 0.03
SUDS3-204ENST00000543473 ANKHD1Q8IWZ3 2542 aaKnown RBP15.25■□□□□ 0.03
SUDS3-204ENST00000543473 LEPROTO15243 131 aa15.25■□□□□ 0.03
SUDS3-204ENST00000543473 P0C879 139 aa15.25■□□□□ 0.03
SUDS3-204ENST00000543473 IGFL2Q6UWQ7 119 aa15.25■□□□□ 0.03
SUDS3-204ENST00000543473 PHLDA1Q8WV24 401 aaPredicted RBP15.25■□□□□ 0.03
SUDS3-204ENST00000543473 SHISA9B4DS77 424 aa15.25■□□□□ 0.03
SUDS3-204ENST00000543473 NTN5Q8WTR8 489 aaPredicted RBP15.25■□□□□ 0.03
SUDS3-204ENST00000543473 DYNAPQ8N1N2 210 aa15.25■□□□□ 0.03
SUDS3-204ENST00000543473 IGF2-ASQ6U949 168 aa15.24■□□□□ 0.03
SUDS3-204ENST00000543473 GAGE12JA6NER3 117 aa15.24■□□□□ 0.03
SUDS3-204ENST00000543473 GAGE7O76087 117 aa15.24■□□□□ 0.03
SUDS3-204ENST00000543473 GAGE12FP0CL80 117 aa15.24■□□□□ 0.03
SUDS3-204ENST00000543473 GAGE12GP0CL81 117 aa15.24■□□□□ 0.03
SUDS3-204ENST00000543473 GAGE12IP0CL82 117 aa15.24■□□□□ 0.03
SUDS3-204ENST00000543473 GAGE4Q13068 117 aa15.24■□□□□ 0.03
SUDS3-204ENST00000543473 DSCR9P59020 149 aa15.23■□□□□ 0.03
SUDS3-204ENST00000543473 MSRB1Q9NZV6 116 aa15.23■□□□□ 0.03
SUDS3-204ENST00000543473 IGKV1-17P01599 117 aa15.23■□□□□ 0.03
SUDS3-204ENST00000543473 AGPAT4-IT1Q9H0P7 198 aa15.23■□□□□ 0.03
SUDS3-204ENST00000543473 K7EMI3 77 aa15.23■□□□□ 0.03
SUDS3-204ENST00000543473 GHRHP01286 108 aa15.23■□□□□ 0.03
SUDS3-204ENST00000543473 SPRNQ5BIV9 151 aa15.23■□□□□ 0.03
SUDS3-204ENST00000543473 MALP21145 153 aa15.22■□□□□ 0.03
SUDS3-204ENST00000543473 ZNF106Q9H2Y7 1883 aaKnown RBP15.22■□□□□ 0.03
SUDS3-204ENST00000543473 B5MCH6 92 aa15.22■□□□□ 0.03
SUDS3-204ENST00000543473 G3V4G9 280 aa15.22■□□□□ 0.03
SUDS3-204ENST00000543473 NDUFA12Q9UI09 145 aa15.22■□□□□ 0.03
SUDS3-204ENST00000543473 LHBP01229 141 aa15.22■□□□□ 0.03
SUDS3-204ENST00000543473 C8orf31Q8N9H6 132 aa15.22■□□□□ 0.03
SUDS3-204ENST00000543473 B4DSR2 109 aa15.22■□□□□ 0.03
SUDS3-204ENST00000543473 I3L3M4 83 aa15.22■□□□□ 0.03
SUDS3-204ENST00000543473 TNCP24821 2201 aa15.21■□□□□ 0.03
SUDS3-204ENST00000543473 CFHR4Q92496 578 aa15.21■□□□□ 0.03
SUDS3-204ENST00000543473 HIGD1BQ9P298 99 aa15.21■□□□□ 0.03
SUDS3-204ENST00000543473 KAAG1Q9UBP8 84 aa15.21■□□□□ 0.03
SUDS3-204ENST00000543473 TRGV1A0A0A0MS02 117 aa15.21■□□□□ 0.03
SUDS3-204ENST00000543473 OVOL2Q9BRP0 275 aa15.21■□□□□ 0.03
SUDS3-204ENST00000543473 ZNF503Q96F45 646 aa15.21■□□□□ 0.03
SUDS3-204ENST00000543473 A0A1W2PRX2 142 aa15.21■□□□□ 0.02
SUDS3-204ENST00000543473 INAFM2P0DMQ5 153 aa15.21■□□□□ 0.02
SUDS3-204ENST00000543473 GAGE5Q13069 117 aa15.21■□□□□ 0.02
SUDS3-204ENST00000543473 GAGE6Q13070 117 aa15.21■□□□□ 0.02
SUDS3-204ENST00000543473 CENPFP49454 3210 aa15.2■□□□□ 0.02
SUDS3-204ENST00000543473 KNCNA6PVL3 124 aa15.2■□□□□ 0.02
SUDS3-204ENST00000543473 TP53TG3Q9ULZ0 132 aa15.2■□□□□ 0.02
SUDS3-204ENST00000543473 PF4P02776 101 aa15.2■□□□□ 0.02
SUDS3-204ENST00000543473 CFC1BP0CG36 223 aa15.2■□□□□ 0.02
SUDS3-204ENST00000543473 CFC1P0CG37 223 aa15.2■□□□□ 0.02
SUDS3-204ENST00000543473 C15orf53Q8NAA6 179 aa15.19■□□□□ 0.02
SUDS3-204ENST00000543473 S100A7L2Q5SY68 101 aa15.19■□□□□ 0.02
SUDS3-204ENST00000543473 ZNF493Q6ZR52 646 aa15.19■□□□□ 0.02
SUDS3-204ENST00000543473 IGLV2-8P01709 118 aa15.19■□□□□ 0.02
SUDS3-204ENST00000543473 UBE2E1P51965 193 aa15.19■□□□□ 0.02
SUDS3-204ENST00000543473 SPATA12Q7Z6I5 190 aa15.19■□□□□ 0.02
SUDS3-204ENST00000543473 CTSZQ9UBR2 303 aa15.19■□□□□ 0.02
SUDS3-204ENST00000543473 UTRNP46939 3433 aa15.19■□□□□ 0.02
SUDS3-204ENST00000543473 IGHV3-53P01767 116 aa15.18■□□□□ 0.02
SUDS3-204ENST00000543473 CARD19Q96LW7 228 aa15.18■□□□□ 0.02
SUDS3-204ENST00000543473 SPINK13Q1W4C9 94 aa15.18■□□□□ 0.02
SUDS3-204ENST00000543473 BRWD1-AS2P59051 145 aa15.18■□□□□ 0.02
SUDS3-204ENST00000543473 FOXE3Q13461 319 aa15.18■□□□□ 0.02
SUDS3-204ENST00000543473 C11orf68Q9H3H3 251 aaKnown RBP15.18■□□□□ 0.02
SUDS3-204ENST00000543473 MRPL36Q9P0J6 103 aaKnown RBP15.18■□□□□ 0.02
SUDS3-204ENST00000543473 DYSFO75923 2080 aa15.18■□□□□ 0.02
SUDS3-204ENST00000543473 I3L2K1 104 aa15.18■□□□□ 0.02
SUDS3-204ENST00000543473 CTRLP40313 264 aa15.18■□□□□ 0.02
SUDS3-204ENST00000543473 COL4A4P53420 1690 aaPredicted RBP15.18■□□□□ 0.02
SUDS3-204ENST00000543473 PCNX3Q9H6A9 2034 aa15.17■□□□□ 0.02
SUDS3-204ENST00000543473 A0A1B0GXF2 115 aa15.17■□□□□ 0.02
SUDS3-204ENST00000543473 IGF2RP11717 2491 aa15.17■□□□□ 0.02
SUDS3-204ENST00000543473 DKK4Q9UBT3 224 aa15.17■□□□□ 0.02
SUDS3-204ENST00000543473 C19orf71A6NCJ1 209 aa15.17■□□□□ 0.02
SUDS3-204ENST00000543473 K7EIM0 57 aa15.17■□□□□ 0.02
SUDS3-204ENST00000543473 PIP4P2Q8N4L2 257 aa15.17■□□□□ 0.02
SUDS3-204ENST00000543473 SS18L2Q9UHA2 77 aa15.17■□□□□ 0.02
SUDS3-204ENST00000543473 KLK9Q9UKQ9 250 aa15.17■□□□□ 0.02
SUDS3-204ENST00000543473 C6orf226Q5I0X4 101 aa15.16■□□□□ 0.02
SUDS3-204ENST00000543473 GDF5OSQ5U4N7 250 aa15.16■□□□□ 0.02
SUDS3-204ENST00000543473 JPT2Q9H910 190 aa15.16■□□□□ 0.02
SUDS3-204ENST00000543473 PROP1O75360 226 aa15.16■□□□□ 0.02
SUDS3-204ENST00000543473 SP5Q6BEB4 398 aaPredicted RBP15.16■□□□□ 0.02
SUDS3-204ENST00000543473 E7EUB6 86 aa15.15■□□□□ 0.02
SUDS3-204ENST00000543473 RITA1Q96K30 269 aa15.15■□□□□ 0.02
SUDS3-204ENST00000543473 IGHV1OR15-1A0A075B7D0 117 aa15.15■□□□□ 0.02
SUDS3-204ENST00000543473 RBX1P62877 108 aa15.15■□□□□ 0.02
SUDS3-204ENST00000543473 TP73-AS1Q9UF72 201 aa15.15■□□□□ 0.02
SUDS3-204ENST00000543473 GRNP28799 593 aaKnown RBP15.14■□□□□ 0.01
SUDS3-204ENST00000543473 TEN1Q86WV5 123 aa15.14■□□□□ 0.01
SUDS3-204ENST00000543473 SPRY2O43597 315 aa15.14■□□□□ 0.01
SUDS3-204ENST00000543473 DNAJC30Q96LL9 226 aa15.14■□□□□ 0.01
SUDS3-204ENST00000543473 SYNJ2BPP57105 145 aa15.14■□□□□ 0.01
SUDS3-204ENST00000543473 LAMTOR3Q9UHA4 124 aa15.14■□□□□ 0.01
SUDS3-204ENST00000543473 RBAKDNA6NC62 111 aa15.14■□□□□ 0.01
SUDS3-204ENST00000543473 NDUFA4O00483 81 aa15.14■□□□□ 0.01
SUDS3-204ENST00000543473 INS-IGF2F8WCM5 200 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms