RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 LINC00612Q8N6U2 182 aa6.85□□□□□ -1.31
TNFRSF1A-214ENST00000543048 ARL2-SNX15V9GYD0 113 aa6.85□□□□□ -1.31
TNFRSF1A-214ENST00000543048 DNAH17Q9UFH2 4485 aa6.85□□□□□ -1.31
TNFRSF1A-214ENST00000543048 BIRC6Q9NR09 4857 aa6.85□□□□□ -1.31
TNFRSF1A-214ENST00000543048 RBFOX3A6NFN3 312 aa6.84□□□□□ -1.31
TNFRSF1A-214ENST00000543048 ZNF506Q5JVG8 444 aa6.84□□□□□ -1.31
TNFRSF1A-214ENST00000543048 UBE2DNLQ8IWF7 75 aa6.84□□□□□ -1.31
TNFRSF1A-214ENST00000543048 CMTM2Q8TAZ6 248 aa6.84□□□□□ -1.31
TNFRSF1A-214ENST00000543048 SUN5Q8TC36 379 aa6.84□□□□□ -1.31
TNFRSF1A-214ENST00000543048 EIF5A2Q9GZV4 153 aaKnown RBP6.84□□□□□ -1.31
TNFRSF1A-214ENST00000543048 TMPRSS5Q9H3S3 457 aa6.84□□□□□ -1.31
TNFRSF1A-214ENST00000543048 LENEPQ9Y5L5 61 aa6.84□□□□□ -1.31
TNFRSF1A-214ENST00000543048 IGHV1OR15-1A0A075B7D0 117 aa6.83□□□□□ -1.32
TNFRSF1A-214ENST00000543048 GAGE12BA1L429 117 aa6.83□□□□□ -1.32
TNFRSF1A-214ENST00000543048 GAGE7O76087 117 aa6.83□□□□□ -1.32
TNFRSF1A-214ENST00000543048 GAGE12FP0CL80 117 aa6.83□□□□□ -1.32
TNFRSF1A-214ENST00000543048 GAGE12GP0CL81 117 aa6.83□□□□□ -1.32
TNFRSF1A-214ENST00000543048 GAGE12IP0CL82 117 aa6.83□□□□□ -1.32
TNFRSF1A-214ENST00000543048 OR5I1Q13606 314 aa6.83□□□□□ -1.32
TNFRSF1A-214ENST00000543048 PEA15Q15121 130 aa6.83□□□□□ -1.32
TNFRSF1A-214ENST00000543048 PRR9Q5T870 116 aa6.83□□□□□ -1.32
TNFRSF1A-214ENST00000543048 SMDT1Q9H4I9 107 aa6.83□□□□□ -1.32
TNFRSF1A-214ENST00000543048 GSN-AS1Q9NRJ2 163 aa6.83□□□□□ -1.32
TNFRSF1A-214ENST00000543048 VAX2Q9UIW0 290 aa6.83□□□□□ -1.32
TNFRSF1A-214ENST00000543048 HECTD4Q9Y4D8 3996 aa6.82□□□□□ -1.32
TNFRSF1A-214ENST00000543048 A0A1W2PRE2 83 aa6.82□□□□□ -1.32
TNFRSF1A-214ENST00000543048 PAGE4O60829 102 aa6.82□□□□□ -1.32
TNFRSF1A-214ENST00000543048 ATP6V1G1O75348 118 aa6.82□□□□□ -1.32
TNFRSF1A-214ENST00000543048 NUDT3O95989 172 aa6.82□□□□□ -1.32
TNFRSF1A-214ENST00000543048 UBE2G2P60604 165 aa6.82□□□□□ -1.32
TNFRSF1A-214ENST00000543048 MEF2BQ02080 365 aaPredicted RBP6.82□□□□□ -1.32
TNFRSF1A-214ENST00000543048 LGALS9BQ3B8N2 356 aa6.82□□□□□ -1.32
TNFRSF1A-214ENST00000543048 Q6ZQT7 251 aa6.82□□□□□ -1.32
TNFRSF1A-214ENST00000543048 Q6ZTI0 123 aa6.82□□□□□ -1.32
TNFRSF1A-214ENST00000543048 C11orf72Q8NBR9 251 aa6.82□□□□□ -1.32
TNFRSF1A-214ENST00000543048 Q8TAT8 98 aa6.82□□□□□ -1.32
TNFRSF1A-214ENST00000543048 TXNDC17Q9BRA2 123 aa6.82□□□□□ -1.32
TNFRSF1A-214ENST00000543048 TREM1Q9NP99 234 aa6.82□□□□□ -1.32
TNFRSF1A-214ENST00000543048 FAM74A7A6NL05 159 aa6.81□□□□□ -1.32
TNFRSF1A-214ENST00000543048 M0R2N4 97 aa6.81□□□□□ -1.32
TNFRSF1A-214ENST00000543048 SPINK4O60575 86 aa6.81□□□□□ -1.32
TNFRSF1A-214ENST00000543048 NDUFS6O75380 124 aaKnown RBP6.81□□□□□ -1.32
TNFRSF1A-214ENST00000543048 FAM3BP58499 235 aaPredicted RBP6.81□□□□□ -1.32
TNFRSF1A-214ENST00000543048 SRSF3P84103 164 aaKnown RBP6.81□□□□□ -1.32
TNFRSF1A-214ENST00000543048 IBA57Q5T440 356 aaKnown RBP6.81□□□□□ -1.32
TNFRSF1A-214ENST00000543048 CST9LP1Q5W188 147 aa6.81□□□□□ -1.32
TNFRSF1A-214ENST00000543048 GOLT1AQ6ZVE7 132 aa6.81□□□□□ -1.32
TNFRSF1A-214ENST00000543048 ATG101Q9BSB4 218 aa6.81□□□□□ -1.32
TNFRSF1A-214ENST00000543048 NKX6-2Q9C056 277 aaPredicted RBP6.81□□□□□ -1.32
TNFRSF1A-214ENST00000543048 TP53TG3Q9ULZ0 132 aa6.81□□□□□ -1.32
TNFRSF1A-214ENST00000543048 RPH3ALQ9UNE2 315 aa6.81□□□□□ -1.32
TNFRSF1A-214ENST00000543048 KLF12Q9Y4X4 402 aa6.81□□□□□ -1.32
TNFRSF1A-214ENST00000543048 DNAH2Q9P225 4427 aa6.8□□□□□ -1.32
TNFRSF1A-214ENST00000543048 TRGV2A0A075B6R0 118 aa6.8□□□□□ -1.32
TNFRSF1A-214ENST00000543048 TRAV26-1A0A087WT03 109 aa6.8□□□□□ -1.32
TNFRSF1A-214ENST00000543048 TRGV1A0A0A0MS02 117 aa6.8□□□□□ -1.32
TNFRSF1A-214ENST00000543048 GGTLC3B5MD39 225 aa6.8□□□□□ -1.32
TNFRSF1A-214ENST00000543048 PDE6DO43924 150 aa6.8□□□□□ -1.32
TNFRSF1A-214ENST00000543048 HOXA5P20719 270 aa6.8□□□□□ -1.32
TNFRSF1A-214ENST00000543048 CCL18P55774 89 aa6.8□□□□□ -1.32
TNFRSF1A-214ENST00000543048 TCL1AP56279 114 aa6.8□□□□□ -1.32
TNFRSF1A-214ENST00000543048 Q6AWC8 147 aa6.8□□□□□ -1.32
TNFRSF1A-214ENST00000543048 C18orf15Q96N68 181 aa6.8□□□□□ -1.32
TNFRSF1A-214ENST00000543048 TCEAL7Q9BRU2 100 aa6.8□□□□□ -1.32
TNFRSF1A-214ENST00000543048 IGLV2-18A0A075B6J9 118 aa6.79□□□□□ -1.32
TNFRSF1A-214ENST00000543048 SERTM2A0A1B0GWG4 89 aa6.79□□□□□ -1.32
TNFRSF1A-214ENST00000543048 C9JQL5 133 aa6.79□□□□□ -1.32
TNFRSF1A-214ENST00000543048 F6UZH7 168 aa6.79□□□□□ -1.32
TNFRSF1A-214ENST00000543048 TMEM250H0YL14 139 aa6.79□□□□□ -1.32
TNFRSF1A-214ENST00000543048 H3BNG1 76 aa6.79□□□□□ -1.32
TNFRSF1A-214ENST00000543048 K7EQM0 130 aa6.79□□□□□ -1.32
TNFRSF1A-214ENST00000543048 SRP19P09132 144 aaKnown RBP6.79□□□□□ -1.32
TNFRSF1A-214ENST00000543048 SFTA3P0C7M3 94 aa6.79□□□□□ -1.32
TNFRSF1A-214ENST00000543048 SUMO1P63165 101 aaKnown RBP6.79□□□□□ -1.32
TNFRSF1A-214ENST00000543048 GNG5P63218 68 aa6.79□□□□□ -1.32
TNFRSF1A-214ENST00000543048 ZNF415Q09FC8 603 aa6.79□□□□□ -1.32
TNFRSF1A-214ENST00000543048 MUC21Q5SSG8 566 aa6.79□□□□□ -1.32
TNFRSF1A-214ENST00000543048 FAM159AQ6UWV7 190 aa6.79□□□□□ -1.32
TNFRSF1A-214ENST00000543048 Q6ZR54 194 aa6.79□□□□□ -1.32
TNFRSF1A-214ENST00000543048 C5orf17Q8NAS9 161 aa6.79□□□□□ -1.32
TNFRSF1A-214ENST00000543048 TRAV8-1A0A0A6YYK1 113 aa6.78□□□□□ -1.32
TNFRSF1A-214ENST00000543048 TRAV21A0A0B4J279 112 aa6.78□□□□□ -1.32
TNFRSF1A-214ENST00000543048 A0A0J9YY99 117 aa6.78□□□□□ -1.32
TNFRSF1A-214ENST00000543048 TMEM218A2RU14 115 aa6.78□□□□□ -1.32
TNFRSF1A-214ENST00000543048 KRBOX1C9JBD0 128 aa6.78□□□□□ -1.32
TNFRSF1A-214ENST00000543048 TCRAP04437 139 aa6.78□□□□□ -1.32
TNFRSF1A-214ENST00000543048 LINC00336Q6ZUF6 198 aa6.78□□□□□ -1.32
TNFRSF1A-214ENST00000543048 CYB561D1Q8N8Q1 229 aa6.78□□□□□ -1.32
TNFRSF1A-214ENST00000543048 C11orf52Q96A22 123 aa6.78□□□□□ -1.32
TNFRSF1A-214ENST00000543048 TVP23CQ96ET8 276 aa6.78□□□□□ -1.32
TNFRSF1A-214ENST00000543048 SPXQ9BT56 116 aa6.78□□□□□ -1.32
TNFRSF1A-214ENST00000543048 MDFICQ9P1T7 246 aa6.78□□□□□ -1.32
TNFRSF1A-214ENST00000543048 EPDR1Q9UM22 224 aa6.78□□□□□ -1.32
TNFRSF1A-214ENST00000543048 LINC00588Q9Y4M8 146 aa6.78□□□□□ -1.32
TNFRSF1A-214ENST00000543048 TRGV11A0A075B6L2 103 aa6.77□□□□□ -1.33
TNFRSF1A-214ENST00000543048 GNRH2O43555 120 aa6.77□□□□□ -1.33
TNFRSF1A-214ENST00000543048 S100A1P23297 94 aa6.77□□□□□ -1.33
TNFRSF1A-214ENST00000543048 SLAQ13239 276 aa6.77□□□□□ -1.33
TNFRSF1A-214ENST00000543048 TMEM183BQ1AE95 376 aa6.77□□□□□ -1.33
TNFRSF1A-214ENST00000543048 TDRG1Q3Y452 100 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms