RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 IGHV7-4-1A0A0J9YVY3 117 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 LINC01548A6NM66 108 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 G3V318 75 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 H3BRM9 83 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 NPFFO15130 113 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 GYPEP15421 78 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 FXYD7P58549 80 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 HSD52Q0P140 79 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 ECSCRQ19T08 205 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 AMMECR1LQ6DCA0 310 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 CLEC19AQ6UXS0 136 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 RNF182Q8N6D2 247 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 C5orf56Q8N8D9 126 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 Q8N8P6 123 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 OR4X2Q8NGF9 303 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 EEF1AKMT3Q96AZ1 226 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 PEF1Q9UBV8 284 aaKnown RBP3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 NBPF19A0A087WUL8 3843 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 ABCA4P78363 2273 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 TRAV8-6A0A0B4J262 113 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 A1L4Q6 167 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 C7orf71A4D174 169 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 SNAI2O43623 268 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 BRI3O95415 125 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 LEPP41159 167 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 UFSP1Q6NVU6 142 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 ERASQ7Z444 233 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 NRACQ8N912 160 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 ITLN2Q8WWU7 325 aaPredicted RBP3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 METTL26Q96S19 204 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 TMEM160Q9NX00 188 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 DKK2Q9UBU2 259 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 HHLA3Q9XRX5 114 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 LENEPQ9Y5L5 61 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 LRRK2Q5S007 2527 aa3.96□□□□□ -1.78
ATPAF1-212ENST00000542495 A6NDN8 102 aa3.96□□□□□ -1.78
ATPAF1-212ENST00000542495 C9orf118A6NHY6 69 aa3.96□□□□□ -1.78
ATPAF1-212ENST00000542495 FAM223BA6NKX1 122 aa3.96□□□□□ -1.78
ATPAF1-212ENST00000542495 HLA-DRB4P13762 266 aa3.96□□□□□ -1.78
ATPAF1-212ENST00000542495 GATA1P15976 413 aaPredicted RBP3.96□□□□□ -1.78
ATPAF1-212ENST00000542495 EVI2AP22794 236 aa3.96□□□□□ -1.78
ATPAF1-212ENST00000542495 ATP5G2Q06055 141 aa3.96□□□□□ -1.78
ATPAF1-212ENST00000542495 TMEM78Q5T7P6 136 aa3.96□□□□□ -1.78
ATPAF1-212ENST00000542495 PCP2Q8IVA1 136 aa3.96□□□□□ -1.78
ATPAF1-212ENST00000542495 FAM223AQ8IWN6 122 aa3.96□□□□□ -1.78
ATPAF1-212ENST00000542495 OR2K2Q8NGT1 345 aa3.96□□□□□ -1.78
ATPAF1-212ENST00000542495 GLMPQ8WWB7 406 aa3.96□□□□□ -1.78
ATPAF1-212ENST00000542495 HIGD1BQ9P298 99 aa3.96□□□□□ -1.78
ATPAF1-212ENST00000542495 SMPXQ9UHP9 88 aa3.96□□□□□ -1.78
ATPAF1-212ENST00000542495 HLA-DRB4X5D2U9 266 aa3.96□□□□□ -1.78
ATPAF1-212ENST00000542495 USP9YO00507 2555 aaPredicted RBP3.96□□□□□ -1.78
ATPAF1-212ENST00000542495 TRAV41A0A0B4J266 112 aa3.95□□□□□ -1.78
ATPAF1-212ENST00000542495 IGHV3-66A0A0C4DH42 116 aa3.95□□□□□ -1.78
ATPAF1-212ENST00000542495 SOCS3O14543 225 aa3.95□□□□□ -1.78
ATPAF1-212ENST00000542495 ATP5LO75964 103 aa3.95□□□□□ -1.78
ATPAF1-212ENST00000542495 TRGV3P03979 118 aa3.95□□□□□ -1.78
ATPAF1-212ENST00000542495 GNLYP22749 145 aa3.95□□□□□ -1.78
ATPAF1-212ENST00000542495 PPIFP30405 207 aaKnown RBP3.95□□□□□ -1.78
ATPAF1-212ENST00000542495 C9orf139Q6ZV77 190 aa3.95□□□□□ -1.78
ATPAF1-212ENST00000542495 GPHB5Q86YW7 130 aa3.95□□□□□ -1.78
ATPAF1-212ENST00000542495 TMEM158Q8WZ71 300 aa3.95□□□□□ -1.78
ATPAF1-212ENST00000542495 BPESC1Q9GZL8 116 aa3.95□□□□□ -1.78
ATPAF1-212ENST00000542495 CST9LQ9H4G1 147 aa3.95□□□□□ -1.78
ATPAF1-212ENST00000542495 UBTD1Q9HAC8 227 aa3.95□□□□□ -1.78
ATPAF1-212ENST00000542495 MOB4Q9Y3A3 225 aa3.95□□□□□ -1.78
ATPAF1-212ENST00000542495 DCHS2Q6V1P9 2916 aa3.95□□□□□ -1.78
ATPAF1-212ENST00000542495 HRNRQ86YZ3 2850 aaPredicted RBP3.95□□□□□ -1.78
ATPAF1-212ENST00000542495 SPTBN1Q01082 2364 aaKnown RBP3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 IGHV3OR16-13A0A075B7E8 117 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 IGKV2D-26A0A0A0MRZ7 120 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 IGHV3-74A0A0B4J1X5 117 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 ZNF207O43670 478 aaKnown RBP3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 IGKCP01834 107 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 IGF1P05019 195 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 SMIM17P0DL12 118 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 UQCRFS1P47985 274 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 OCIAD2Q56VL3 154 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 PRR9Q5T870 116 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 Q6ZQT7 251 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 APRG1Q8IVJ8 170 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 MRAP2Q96G30 205 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 C20orf173Q96LM9 149 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 FAM19A4Q96LR4 140 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 LINC00477Q96M19 166 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 C18orf15Q96N68 181 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 MEGF9Q9H1U4 602 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 TEX15Q9BXT5 2789 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 USP9XQ93008 2570 aaPredicted RBP3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 IGHV3-49A0A0A0MS15 119 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 IGHV1-69DA0A0B4J2H0 117 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 TRBV7-9A0A0J9YWB2 115 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 GAGE12BA1L429 117 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 H3BUA1 57 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 K7EP34 96 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 NDUFA4O00483 81 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 OVOL1O14753 267 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 DPM2O94777 84 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 IGHV1-69P01742 117 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 PRSS1P07477 247 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 MED14OSP0DP75 135 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms