RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 MED9Q9NWA0 146 aa13.39□□□□□ -0.27
VPS33A-205ENST00000541169 NAGKQ9UJ70 344 aa13.39□□□□□ -0.27
VPS33A-205ENST00000541169 RAB14P61106 215 aa13.38□□□□□ -0.27
VPS33A-205ENST00000541169 ZNF674Q2M3X9 581 aa13.38□□□□□ -0.27
VPS33A-205ENST00000541169 Q6ZTC4 211 aa13.38□□□□□ -0.27
VPS33A-205ENST00000541169 C18orf15Q96N68 181 aa13.38□□□□□ -0.27
VPS33A-205ENST00000541169 FAM210AQ96ND0 272 aa13.38□□□□□ -0.27
VPS33A-205ENST00000541169 EIF5A2Q9GZV4 153 aaKnown RBP13.38□□□□□ -0.27
VPS33A-205ENST00000541169 GSN-AS1Q9NRJ2 163 aa13.38□□□□□ -0.27
VPS33A-205ENST00000541169 ZNF80P51504 273 aaPredicted RBP13.37□□□□□ -0.27
VPS33A-205ENST00000541169 ZFAND6Q6FIF0 208 aa13.37□□□□□ -0.27
VPS33A-205ENST00000541169 LINC00612Q8N6U2 182 aa13.37□□□□□ -0.27
VPS33A-205ENST00000541169 MLST8Q9BVC4 326 aa13.37□□□□□ -0.27
VPS33A-205ENST00000541169 SMDT1Q9H4I9 107 aa13.37□□□□□ -0.27
VPS33A-205ENST00000541169 DEFB131BA0A096LNP1 70 aa13.36□□□□□ -0.27
VPS33A-205ENST00000541169 DEFB130BP0DP73 79 aa13.36□□□□□ -0.27
VPS33A-205ENST00000541169 DEFB130AP0DP74 79 aa13.36□□□□□ -0.27
VPS33A-205ENST00000541169 GNG4P50150 75 aa13.36□□□□□ -0.27
VPS33A-205ENST00000541169 ZC2HC1AQ96GY0 325 aa13.36□□□□□ -0.27
VPS33A-205ENST00000541169 NDUFAF3Q9BU61 184 aa13.36□□□□□ -0.27
VPS33A-205ENST00000541169 SPINK4O60575 86 aa13.35□□□□□ -0.27
VPS33A-205ENST00000541169 ATP5G1P05496 136 aa13.35□□□□□ -0.27
VPS33A-205ENST00000541169 Q6ZQT7 251 aa13.35□□□□□ -0.27
VPS33A-205ENST00000541169 ZNF767PQ75MW2 155 aa13.35□□□□□ -0.27
VPS33A-205ENST00000541169 IGHV3-16A0A0C4DH30 117 aa13.34□□□□□ -0.27
VPS33A-205ENST00000541169 TYMSP04818 313 aa13.34□□□□□ -0.27
VPS33A-205ENST00000541169 C9JCJ5 164 aa13.33□□□□□ -0.28
VPS33A-205ENST00000541169 ORM1P02763 201 aa13.33□□□□□ -0.28
VPS33A-205ENST00000541169 LINC01559Q495D7 138 aa13.33□□□□□ -0.28
VPS33A-205ENST00000541169 CENPWQ5EE01 88 aa13.33□□□□□ -0.28
VPS33A-205ENST00000541169 TOR2AQ5JU69 321 aa13.33□□□□□ -0.28
VPS33A-205ENST00000541169 DNLZQ5SXM8 178 aa13.33□□□□□ -0.28
VPS33A-205ENST00000541169 RASL10AQ92737 203 aa13.33□□□□□ -0.28
VPS33A-205ENST00000541169 DERL1Q9BUN8 251 aa13.33□□□□□ -0.28
VPS33A-205ENST00000541169 MDFICQ9P1T7 246 aa13.33□□□□□ -0.28
VPS33A-205ENST00000541169 TRGV2A0A075B6R0 118 aa13.32□□□□□ -0.28
VPS33A-205ENST00000541169 TRGV1A0A0A0MS02 117 aa13.32□□□□□ -0.28
VPS33A-205ENST00000541169 B4DEV8 164 aa13.32□□□□□ -0.28
VPS33A-205ENST00000541169 M0R2P5 195 aa13.32□□□□□ -0.28
VPS33A-205ENST00000541169 GNRH2O43555 120 aa13.32□□□□□ -0.28
VPS33A-205ENST00000541169 SH2D1AO60880 128 aa13.32□□□□□ -0.28
VPS33A-205ENST00000541169 ASIPP42127 132 aa13.32□□□□□ -0.28
VPS33A-205ENST00000541169 CRIP1P50238 77 aa13.32□□□□□ -0.28
VPS33A-205ENST00000541169 PEA15Q15121 130 aa13.32□□□□□ -0.28
VPS33A-205ENST00000541169 PIK3CD-AS1Q5SR53 167 aa13.32□□□□□ -0.28
VPS33A-205ENST00000541169 PTH2Q96A98 100 aa13.32□□□□□ -0.28
VPS33A-205ENST00000541169 CXCL1P09341 107 aa13.31□□□□□ -0.28
VPS33A-205ENST00000541169 S100A4P26447 101 aaKnown RBP13.31□□□□□ -0.28
VPS33A-205ENST00000541169 DAZAP1Q96EP5 407 aaKnown RBP13.31□□□□□ -0.28
VPS33A-205ENST00000541169 C11orf21Q9P2W6 132 aa13.31□□□□□ -0.28
VPS33A-205ENST00000541169 IGKV3D-20A0A0C4DH25 116 aa13.3□□□□□ -0.28
VPS33A-205ENST00000541169 GAGE12BA1L429 117 aa13.3□□□□□ -0.28
VPS33A-205ENST00000541169 KRBOX1C9JBD0 128 aa13.3□□□□□ -0.28
VPS33A-205ENST00000541169 CIDEAO60543 219 aa13.3□□□□□ -0.28
VPS33A-205ENST00000541169 GAGE7O76087 117 aa13.3□□□□□ -0.28
VPS33A-205ENST00000541169 GAGE12FP0CL80 117 aa13.3□□□□□ -0.28
VPS33A-205ENST00000541169 GAGE12GP0CL81 117 aa13.3□□□□□ -0.28
VPS33A-205ENST00000541169 GAGE12IP0CL82 117 aa13.3□□□□□ -0.28
VPS33A-205ENST00000541169 Q6ZTI0 123 aa13.3□□□□□ -0.28
VPS33A-205ENST00000541169 NHLRC2Q8NBF2 726 aa13.3□□□□□ -0.28
VPS33A-205ENST00000541169 IL36BQ9NZH7 164 aa13.3□□□□□ -0.28
VPS33A-205ENST00000541169 LY96Q9Y6Y9 160 aa13.3□□□□□ -0.28
VPS33A-205ENST00000541169 FAM74A3Q4VXF1 159 aa13.29□□□□□ -0.28
VPS33A-205ENST00000541169 C9orf85Q96MD7 179 aa13.29□□□□□ -0.28
VPS33A-205ENST00000541169 PARLQ9H300 379 aa13.29□□□□□ -0.28
VPS33A-205ENST00000541169 XKRY2A2RUG3 117 aa13.28□□□□□ -0.28
VPS33A-205ENST00000541169 RAB19A4D1S5 217 aa13.28□□□□□ -0.28
VPS33A-205ENST00000541169 IGLL5B9A064 214 aa13.28□□□□□ -0.28
VPS33A-205ENST00000541169 MGST1P10620 155 aaKnown RBP13.28□□□□□ -0.28
VPS33A-205ENST00000541169 SLAQ13239 276 aa13.28□□□□□ -0.28
VPS33A-205ENST00000541169 OR5I1Q13606 314 aa13.28□□□□□ -0.28
VPS33A-205ENST00000541169 IGLV2-8P01709 118 aa13.27□□□□□ -0.29
VPS33A-205ENST00000541169 MED14OSP0DP75 135 aa13.27□□□□□ -0.29
VPS33A-205ENST00000541169 HTN3P15516 51 aa13.27□□□□□ -0.29
VPS33A-205ENST00000541169 RPS20P60866 119 aaKnown RBP13.27□□□□□ -0.29
VPS33A-205ENST00000541169 PRR27Q6MZM9 219 aa13.27□□□□□ -0.29
VPS33A-205ENST00000541169 C15orf53Q8NAA6 179 aa13.27□□□□□ -0.29
VPS33A-205ENST00000541169 TRBV20OR9-2A0A075B6H5 130 aa13.26□□□□□ -0.29
VPS33A-205ENST00000541169 IGHV4-4A0A075B6R2 117 aa13.26□□□□□ -0.29
VPS33A-205ENST00000541169 F5H768 121 aa13.26□□□□□ -0.29
VPS33A-205ENST00000541169 H3BNG1 76 aa13.26□□□□□ -0.29
VPS33A-205ENST00000541169 M0R036 132 aa13.26□□□□□ -0.29
VPS33A-205ENST00000541169 SRP19P09132 144 aaKnown RBP13.26□□□□□ -0.29
VPS33A-205ENST00000541169 CLLU1Q5K131 121 aa13.26□□□□□ -0.29
VPS33A-205ENST00000541169 SMIM7Q9BQ49 75 aa13.26□□□□□ -0.29
VPS33A-205ENST00000541169 MRPL16Q9NX20 251 aaKnown RBP13.26□□□□□ -0.29
VPS33A-205ENST00000541169 P01737 135 aa13.25□□□□□ -0.29
VPS33A-205ENST00000541169 RNASE3P12724 160 aaKnown RBP13.25□□□□□ -0.29
VPS33A-205ENST00000541169 ZNF876PQ49A33 203 aa13.25□□□□□ -0.29
VPS33A-205ENST00000541169 SYT8Q8NBV8 401 aa13.25□□□□□ -0.29
VPS33A-205ENST00000541169 TRAV4A0A0B4J268 109 aa13.24□□□□□ -0.29
VPS33A-205ENST00000541169 ZNF727A8MUV8 499 aa13.24□□□□□ -0.29
VPS33A-205ENST00000541169 C19orf71A6NCJ1 209 aa13.23□□□□□ -0.29
VPS33A-205ENST00000541169 CEBPGP53567 150 aa13.23□□□□□ -0.29
VPS33A-205ENST00000541169 OCC1Q8TAD7 63 aa13.23□□□□□ -0.29
VPS33A-205ENST00000541169 PCNPQ8WW12 178 aaKnown RBP13.23□□□□□ -0.29
VPS33A-205ENST00000541169 APLNQ9ULZ1 77 aa13.23□□□□□ -0.29
VPS33A-205ENST00000541169 PHLDA3Q9Y5J5 127 aa13.23□□□□□ -0.29
VPS33A-205ENST00000541169 A8MWV9 139 aa13.22□□□□□ -0.29
VPS33A-205ENST00000541169 ARMS2P0C7Q2 107 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms