RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 ZNF506Q5JVG8 444 aa13.82□□□□□ -0.2
DDX55-207ENST00000540763 SMIM12Q96EX1 92 aa13.82□□□□□ -0.2
DDX55-207ENST00000540763 ZC2HC1AQ96GY0 325 aa13.82□□□□□ -0.2
DDX55-207ENST00000540763 MLST8Q9BVC4 326 aa13.82□□□□□ -0.2
DDX55-207ENST00000540763 GSN-AS1Q9NRJ2 163 aa13.82□□□□□ -0.2
DDX55-207ENST00000540763 FAM210AQ96ND0 272 aa13.81□□□□□ -0.2
DDX55-207ENST00000540763 NAGKQ9UJ70 344 aa13.81□□□□□ -0.2
DDX55-207ENST00000540763 STARD9Q9P2P6 4700 aa13.81□□□□□ -0.2
DDX55-207ENST00000540763 TMEM250H0YL14 139 aa13.8□□□□□ -0.2
DDX55-207ENST00000540763 ZNF674Q2M3X9 581 aa13.8□□□□□ -0.2
DDX55-207ENST00000540763 LGALS9BQ3B8N2 356 aa13.8□□□□□ -0.2
DDX55-207ENST00000540763 FAM162BQ5T6X4 162 aa13.8□□□□□ -0.2
DDX55-207ENST00000540763 BAGE2Q86Y30 109 aa13.8□□□□□ -0.2
DDX55-207ENST00000540763 C18orf15Q96N68 181 aa13.8□□□□□ -0.2
DDX55-207ENST00000540763 SPXQ9BT56 116 aa13.8□□□□□ -0.2
DDX55-207ENST00000540763 SPINK4O60575 86 aa13.79□□□□□ -0.2
DDX55-207ENST00000540763 TYMSP04818 313 aa13.79□□□□□ -0.2
DDX55-207ENST00000540763 TCTAP57738 103 aa13.79□□□□□ -0.2
DDX55-207ENST00000540763 ZNF767PQ75MW2 155 aa13.79□□□□□ -0.2
DDX55-207ENST00000540763 DERL1Q9BUN8 251 aa13.79□□□□□ -0.2
DDX55-207ENST00000540763 MED9Q9NWA0 146 aa13.79□□□□□ -0.2
DDX55-207ENST00000540763 C11orf21Q9P2W6 132 aa13.79□□□□□ -0.2
DDX55-207ENST00000540763 DEFB131BA0A096LNP1 70 aa13.78□□□□□ -0.2
DDX55-207ENST00000540763 IGHV3-16A0A0C4DH30 117 aa13.78□□□□□ -0.2
DDX55-207ENST00000540763 DEFB130BP0DP73 79 aa13.78□□□□□ -0.2
DDX55-207ENST00000540763 DEFB130AP0DP74 79 aa13.78□□□□□ -0.2
DDX55-207ENST00000540763 CRIP1P50238 77 aa13.77□□□□□ -0.21
DDX55-207ENST00000540763 CENPWQ5EE01 88 aa13.77□□□□□ -0.21
DDX55-207ENST00000540763 TOR2AQ5JU69 321 aa13.77□□□□□ -0.21
DDX55-207ENST00000540763 FAM210BQ96KR6 192 aa13.77□□□□□ -0.21
DDX55-207ENST00000540763 MDFICQ9P1T7 246 aa13.77□□□□□ -0.21
DDX55-207ENST00000540763 GNRH2O43555 120 aa13.76□□□□□ -0.21
DDX55-207ENST00000540763 SH2D1AO60880 128 aa13.76□□□□□ -0.21
DDX55-207ENST00000540763 ATP5G1P05496 136 aa13.76□□□□□ -0.21
DDX55-207ENST00000540763 GNG4P50150 75 aa13.76□□□□□ -0.21
DDX55-207ENST00000540763 LINC01559Q495D7 138 aa13.76□□□□□ -0.21
DDX55-207ENST00000540763 NHLRC2Q8NBF2 726 aa13.76□□□□□ -0.21
DDX55-207ENST00000540763 EIF5A2Q9GZV4 153 aaKnown RBP13.76□□□□□ -0.21
DDX55-207ENST00000540763 IGKV3D-20A0A0C4DH25 116 aa13.75□□□□□ -0.21
DDX55-207ENST00000540763 LCE6AA0A183 80 aa13.75□□□□□ -0.21
DDX55-207ENST00000540763 C9JCJ5 164 aa13.75□□□□□ -0.21
DDX55-207ENST00000540763 DNLZQ5SXM8 178 aa13.75□□□□□ -0.21
DDX55-207ENST00000540763 Q6ZTI0 123 aa13.75□□□□□ -0.21
DDX55-207ENST00000540763 DYNC2H1Q8NCM8 4307 aaKnown RBP13.74□□□□□ -0.21
DDX55-207ENST00000540763 TRGV1A0A0A0MS02 117 aa13.74□□□□□ -0.21
DDX55-207ENST00000540763 GAGE12BA1L429 117 aa13.74□□□□□ -0.21
DDX55-207ENST00000540763 B4DEV8 164 aa13.74□□□□□ -0.21
DDX55-207ENST00000540763 GAGE7O76087 117 aa13.74□□□□□ -0.21
DDX55-207ENST00000540763 GAGE12FP0CL80 117 aa13.74□□□□□ -0.21
DDX55-207ENST00000540763 GAGE12GP0CL81 117 aa13.74□□□□□ -0.21
DDX55-207ENST00000540763 GAGE12IP0CL82 117 aa13.74□□□□□ -0.21
DDX55-207ENST00000540763 RASL10AQ92737 203 aa13.74□□□□□ -0.21
DDX55-207ENST00000540763 C9orf85Q96MD7 179 aa13.74□□□□□ -0.21
DDX55-207ENST00000540763 NDUFAF3Q9BU61 184 aa13.74□□□□□ -0.21
DDX55-207ENST00000540763 BIN3Q9NQY0 253 aa13.74□□□□□ -0.21
DDX55-207ENST00000540763 TRBV20OR9-2A0A075B6H5 130 aa13.73□□□□□ -0.21
DDX55-207ENST00000540763 KRBOX1C9JBD0 128 aa13.73□□□□□ -0.21
DDX55-207ENST00000540763 M0R2P5 195 aa13.73□□□□□ -0.21
DDX55-207ENST00000540763 IGLV2-8P01709 118 aa13.73□□□□□ -0.21
DDX55-207ENST00000540763 ORM1P02763 201 aa13.73□□□□□ -0.21
DDX55-207ENST00000540763 CXCL1P09341 107 aa13.73□□□□□ -0.21
DDX55-207ENST00000540763 PTH2Q96A98 100 aa13.73□□□□□ -0.21
DDX55-207ENST00000540763 PARLQ9H300 379 aa13.73□□□□□ -0.21
DDX55-207ENST00000540763 SMDT1Q9H4I9 107 aa13.73□□□□□ -0.21
DDX55-207ENST00000540763 RAB19A4D1S5 217 aa13.72□□□□□ -0.21
DDX55-207ENST00000540763 ASIPP42127 132 aa13.72□□□□□ -0.21
DDX55-207ENST00000540763 PCNPQ8WW12 178 aaKnown RBP13.72□□□□□ -0.21
DDX55-207ENST00000540763 MRPL16Q9NX20 251 aaKnown RBP13.72□□□□□ -0.21
DDX55-207ENST00000540763 MUC4Q99102 2169 aa13.71□□□□□ -0.21
DDX55-207ENST00000540763 TRGV2A0A075B6R0 118 aa13.71□□□□□ -0.21
DDX55-207ENST00000540763 IGHV4-4A0A075B6R2 117 aa13.71□□□□□ -0.21
DDX55-207ENST00000540763 IGLL5B9A064 214 aa13.71□□□□□ -0.21
DDX55-207ENST00000540763 RNASE3P12724 160 aaKnown RBP13.71□□□□□ -0.21
DDX55-207ENST00000540763 RAB14P61106 215 aa13.71□□□□□ -0.21
DDX55-207ENST00000540763 IL36BQ9NZH7 164 aa13.71□□□□□ -0.21
DDX55-207ENST00000540763 HTN3P15516 51 aa13.7□□□□□ -0.22
DDX55-207ENST00000540763 S100A4P26447 101 aaKnown RBP13.7□□□□□ -0.22
DDX55-207ENST00000540763 PIK3CD-AS1Q5SR53 167 aa13.7□□□□□ -0.22
DDX55-207ENST00000540763 PRR27Q6MZM9 219 aa13.7□□□□□ -0.22
DDX55-207ENST00000540763 M0R036 132 aa13.69□□□□□ -0.22
DDX55-207ENST00000540763 SRP19P09132 144 aaKnown RBP13.69□□□□□ -0.22
DDX55-207ENST00000540763 MGST1P10620 155 aaKnown RBP13.69□□□□□ -0.22
DDX55-207ENST00000540763 LY96Q9Y6Y9 160 aa13.69□□□□□ -0.22
DDX55-207ENST00000540763 C19orf71A6NCJ1 209 aa13.68□□□□□ -0.22
DDX55-207ENST00000540763 F5H768 121 aa13.68□□□□□ -0.22
DDX55-207ENST00000540763 MED14OSP0DP75 135 aa13.68□□□□□ -0.22
DDX55-207ENST00000540763 PEA15Q15121 130 aa13.68□□□□□ -0.22
DDX55-207ENST00000540763 APLNQ9ULZ1 77 aa13.68□□□□□ -0.22
DDX55-207ENST00000540763 NACAE9PAV3 2078 aa13.67□□□□□ -0.22
DDX55-207ENST00000540763 IFITM2Q01629 132 aa13.67□□□□□ -0.22
DDX55-207ENST00000540763 OR5I1Q13606 314 aa13.67□□□□□ -0.22
DDX55-207ENST00000540763 CLLU1Q5K131 121 aa13.67□□□□□ -0.22
DDX55-207ENST00000540763 ZNF575Q86XF7 245 aa13.67□□□□□ -0.22
DDX55-207ENST00000540763 C15orf53Q8NAA6 179 aa13.67□□□□□ -0.22
DDX55-207ENST00000540763 DAZAP1Q96EP5 407 aaKnown RBP13.67□□□□□ -0.22
DDX55-207ENST00000540763 TRAV4A0A0B4J268 109 aa13.66□□□□□ -0.22
DDX55-207ENST00000540763 PGPEP1LA6NFU8 196 aa13.66□□□□□ -0.22
DDX55-207ENST00000540763 SMIM7Q9BQ49 75 aa13.66□□□□□ -0.22
DDX55-207ENST00000540763 SCRT2Q9NQ03 307 aa13.66□□□□□ -0.22
DDX55-207ENST00000540763 RYR2Q92736 4967 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms