RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 BTF3P20290 206 aaKnown RBP8□□□□□ -1.13
RTN3-209ENST00000538995 ESRGQ1W209 222 aa8□□□□□ -1.13
RTN3-209ENST00000538995 AKR1C8PQ5T2L2 129 aa8□□□□□ -1.13
RTN3-209ENST00000538995 IQCF2Q8IXL9 164 aa8□□□□□ -1.13
RTN3-209ENST00000538995 C6orf223Q8N319 242 aa8□□□□□ -1.13
RTN3-209ENST00000538995 TMEM75Q8N9X5 138 aa8□□□□□ -1.13
RTN3-209ENST00000538995 Q9H8V8 135 aa8□□□□□ -1.13
RTN3-209ENST00000538995 SDF2L1Q9HCN8 221 aa8□□□□□ -1.13
RTN3-209ENST00000538995 NAGKQ9UJ70 344 aa8□□□□□ -1.13
RTN3-209ENST00000538995 EPDR1Q9UM22 224 aa8□□□□□ -1.13
RTN3-209ENST00000538995 ICOSQ9Y6W8 199 aa8□□□□□ -1.13
RTN3-209ENST00000538995 DYNC1H1Q14204 4646 aaKnown RBP7.99□□□□□ -1.13
RTN3-209ENST00000538995 IGHV3-16A0A0C4DH30 117 aa7.99□□□□□ -1.13
RTN3-209ENST00000538995 M0R2P5 195 aa7.99□□□□□ -1.13
RTN3-209ENST00000538995 IGHV3-53P01767 116 aa7.99□□□□□ -1.13
RTN3-209ENST00000538995 CRYBA4P53673 196 aa7.99□□□□□ -1.13
RTN3-209ENST00000538995 SUMO1P63165 101 aaKnown RBP7.99□□□□□ -1.13
RTN3-209ENST00000538995 FLI1Q01543 452 aaPredicted RBP7.99□□□□□ -1.13
RTN3-209ENST00000538995 FHL2Q14192 279 aa7.99□□□□□ -1.13
RTN3-209ENST00000538995 ZNF345Q14585 488 aa7.99□□□□□ -1.13
RTN3-209ENST00000538995 ZNF726P1Q15940 193 aa7.99□□□□□ -1.13
RTN3-209ENST00000538995 ZFP69Q49AA0 526 aa7.99□□□□□ -1.13
RTN3-209ENST00000538995 NKX6-2Q9C056 277 aaPredicted RBP7.99□□□□□ -1.13
RTN3-209ENST00000538995 PSG8Q9UQ74 426 aa7.99□□□□□ -1.13
RTN3-209ENST00000538995 HHLA3Q9XRX5 114 aa7.99□□□□□ -1.13
RTN3-209ENST00000538995 PCLOQ9Y6V0 5065 aa7.98□□□□□ -1.13
RTN3-209ENST00000538995 RYR1P21817 5038 aa7.98□□□□□ -1.13
RTN3-209ENST00000538995 TRAV4A0A0B4J268 109 aa7.98□□□□□ -1.13
RTN3-209ENST00000538995 IGLV2-11P01706 119 aa7.98□□□□□ -1.13
RTN3-209ENST00000538995 TYMSP04818 313 aa7.98□□□□□ -1.13
RTN3-209ENST00000538995 PFN1P07737 140 aaKnown RBP7.98□□□□□ -1.13
RTN3-209ENST00000538995 MRPL23Q16540 153 aaKnown RBP7.98□□□□□ -1.13
RTN3-209ENST00000538995 SAPCD1Q5SSQ6 148 aa7.98□□□□□ -1.13
RTN3-209ENST00000538995 CYTL1Q9NRR1 136 aa7.98□□□□□ -1.13
RTN3-209ENST00000538995 KIAA1109Q2LD37 5005 aa7.98□□□□□ -1.13
RTN3-209ENST00000538995 TRGV4A0A0C4DH28 118 aa7.97□□□□□ -1.13
RTN3-209ENST00000538995 GCGP01275 180 aa7.97□□□□□ -1.13
RTN3-209ENST00000538995 ORM1P02763 201 aa7.97□□□□□ -1.13
RTN3-209ENST00000538995 PPT1P50897 306 aa7.97□□□□□ -1.13
RTN3-209ENST00000538995 SMUG1Q53HV7 270 aa7.97□□□□□ -1.13
RTN3-209ENST00000538995 KCNRGQ8N5I3 272 aa7.97□□□□□ -1.13
RTN3-209ENST00000538995 ZNF479Q96JC4 524 aa7.97□□□□□ -1.13
RTN3-209ENST00000538995 SGK494Q96LW2 274 aa7.97□□□□□ -1.13
RTN3-209ENST00000538995 C8orf49Q96NF6 230 aa7.97□□□□□ -1.13
RTN3-209ENST00000538995 TCEAL7Q9BRU2 100 aa7.97□□□□□ -1.13
RTN3-209ENST00000538995 MAP1LC3B2A6NCE7 125 aa7.96□□□□□ -1.14
RTN3-209ENST00000538995 HMSDA8MTL9 139 aa7.96□□□□□ -1.14
RTN3-209ENST00000538995 GNRH2O43555 120 aa7.96□□□□□ -1.14
RTN3-209ENST00000538995 IFNA7P01567 189 aa7.96□□□□□ -1.14
RTN3-209ENST00000538995 SFTA3P0C7M3 94 aa7.96□□□□□ -1.14
RTN3-209ENST00000538995 PRNTQ86SH4 94 aa7.96□□□□□ -1.14
RTN3-209ENST00000538995 PCNPQ8WW12 178 aaKnown RBP7.96□□□□□ -1.14
RTN3-209ENST00000538995 HIST1H2BAQ96A08 127 aa7.96□□□□□ -1.14
RTN3-209ENST00000538995 MAP1LC3BQ9GZQ8 125 aa7.96□□□□□ -1.14
RTN3-209ENST00000538995 ARL2-SNX15V9GYD0 113 aa7.96□□□□□ -1.14
RTN3-209ENST00000538995 FAM74A7A6NL05 159 aa7.95□□□□□ -1.14
RTN3-209ENST00000538995 C9JCJ5 164 aa7.95□□□□□ -1.14
RTN3-209ENST00000538995 PEX7O00628 323 aa7.95□□□□□ -1.14
RTN3-209ENST00000538995 CIDEAO60543 219 aa7.95□□□□□ -1.14
RTN3-209ENST00000538995 SRIP30626 198 aa7.95□□□□□ -1.14
RTN3-209ENST00000538995 ZNF80P51504 273 aaPredicted RBP7.95□□□□□ -1.14
RTN3-209ENST00000538995 NEGR1Q7Z3B1 354 aa7.95□□□□□ -1.14
RTN3-209ENST00000538995 OR4C5Q8NGB2 326 aa7.95□□□□□ -1.14
RTN3-209ENST00000538995 STOML3Q8TAV4 291 aa7.95□□□□□ -1.14
RTN3-209ENST00000538995 PTH2Q96A98 100 aa7.95□□□□□ -1.14
RTN3-209ENST00000538995 KRTAP1-5Q9BYS1 174 aa7.95□□□□□ -1.14
RTN3-209ENST00000538995 C11orf21Q9P2W6 132 aa7.95□□□□□ -1.14
RTN3-209ENST00000538995 A0A0D9SG52 128 aa7.94□□□□□ -1.14
RTN3-209ENST00000538995 UMAD1C9J7I0 102 aa7.94□□□□□ -1.14
RTN3-209ENST00000538995 SMLR1H3BR10 107 aa7.94□□□□□ -1.14
RTN3-209ENST00000538995 K7EQD1 137 aa7.94□□□□□ -1.14
RTN3-209ENST00000538995 SIVA1O15304 175 aa7.94□□□□□ -1.14
RTN3-209ENST00000538995 NXPH4O95158 308 aa7.94□□□□□ -1.14
RTN3-209ENST00000538995 SEC11BP0C7V7 166 aa7.94□□□□□ -1.14
RTN3-209ENST00000538995 MED14OSP0DP75 135 aa7.94□□□□□ -1.14
RTN3-209ENST00000538995 FHITP49789 147 aa7.94□□□□□ -1.14
RTN3-209ENST00000538995 FGF8P55075 233 aaPredicted RBP7.94□□□□□ -1.14
RTN3-209ENST00000538995 UBE2G2P60604 165 aa7.94□□□□□ -1.14
RTN3-209ENST00000538995 TNP2Q05952 138 aa7.94□□□□□ -1.14
RTN3-209ENST00000538995 SH2D6Q7Z4S9 175 aa7.94□□□□□ -1.14
RTN3-209ENST00000538995 Q86TA4 180 aa7.94□□□□□ -1.14
RTN3-209ENST00000538995 C9orf85Q96MD7 179 aa7.94□□□□□ -1.14
RTN3-209ENST00000538995 TXNDC17Q9BRA2 123 aa7.94□□□□□ -1.14
RTN3-209ENST00000538995 BCL2L11O43521 198 aa7.93□□□□□ -1.14
RTN3-209ENST00000538995 GYPEP15421 78 aa7.93□□□□□ -1.14
RTN3-209ENST00000538995 GATA1P15976 413 aaPredicted RBP7.93□□□□□ -1.14
RTN3-209ENST00000538995 EIF5AP63241 154 aaKnown RBP7.93□□□□□ -1.14
RTN3-209ENST00000538995 ZNF876PQ49A33 203 aa7.93□□□□□ -1.14
RTN3-209ENST00000538995 PIK3CD-AS1Q5SR53 167 aa7.93□□□□□ -1.14
RTN3-209ENST00000538995 LYPD5Q6UWN5 251 aa7.93□□□□□ -1.14
RTN3-209ENST00000538995 DPPA3Q6W0C5 159 aa7.93□□□□□ -1.14
RTN3-209ENST00000538995 COX8CQ7Z4L0 72 aa7.93□□□□□ -1.14
RTN3-209ENST00000538995 OR11H4Q8NGC9 324 aa7.93□□□□□ -1.14
RTN3-209ENST00000538995 FMC1Q96HJ9 113 aa7.93□□□□□ -1.14
RTN3-209ENST00000538995 LINC00479Q96M42 142 aa7.93□□□□□ -1.14
RTN3-209ENST00000538995 TRAV34A0A0B4J273 112 aa7.92□□□□□ -1.14
RTN3-209ENST00000538995 TRBV6-1A0A0K0K1D8 114 aa7.92□□□□□ -1.14
RTN3-209ENST00000538995 KANTRA0A1W2PQU2 76 aa7.92□□□□□ -1.14
RTN3-209ENST00000538995 FABP5P3A8MUU1 101 aa7.92□□□□□ -1.14
RTN3-209ENST00000538995 K7EP13 123 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms