RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 HRCT1Q6UXD1 115 aa7.89□□□□□ -1.15
COL4A6-208ENST00000538570 LRRC75A-AS1Q8N1F1 130 aa7.89□□□□□ -1.15
COL4A6-208ENST00000538570 NDUFS5O43920 106 aa7.89□□□□□ -1.15
COL4A6-208ENST00000538570 ANGP03950 147 aaKnown RBP7.89□□□□□ -1.15
COL4A6-208ENST00000538570 VOPP1Q96AW1 172 aa7.89□□□□□ -1.15
COL4A6-208ENST00000538570 K7EM74 188 aa7.89□□□□□ -1.15
COL4A6-208ENST00000538570 CGB7P0DN87 165 aa7.89□□□□□ -1.15
COL4A6-208ENST00000538570 LINC00311Q8N616 119 aa7.89□□□□□ -1.15
COL4A6-208ENST00000538570 RNF152Q8N8N0 203 aa7.89□□□□□ -1.15
COL4A6-208ENST00000538570 CFHR4Q92496 578 aa7.89□□□□□ -1.15
COL4A6-208ENST00000538570 THADAQ6YHU6 1953 aa7.89□□□□□ -1.15
COL4A6-208ENST00000538570 CHKB-CPT1BH3BT56 60 aa7.89□□□□□ -1.15
COL4A6-208ENST00000538570 FHL1Q13642 323 aa7.89□□□□□ -1.15
COL4A6-208ENST00000538570 COA6Q5JTJ3 125 aaKnown RBP7.89□□□□□ -1.15
COL4A6-208ENST00000538570 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.88□□□□□ -1.15
COL4A6-208ENST00000538570 CRYGCP07315 174 aa7.88□□□□□ -1.15
COL4A6-208ENST00000538570 IGF2BP2-AS1Q96M15 143 aa7.88□□□□□ -1.15
COL4A6-208ENST00000538570 FXYD5Q96DB9 178 aa7.88□□□□□ -1.15
COL4A6-208ENST00000538570 GPR179Q6PRD1 2367 aa7.88□□□□□ -1.15
COL4A6-208ENST00000538570 SP5Q6BEB4 398 aaPredicted RBP7.88□□□□□ -1.15
COL4A6-208ENST00000538570 INTS1Q8N201 2190 aaKnown RBP7.88□□□□□ -1.15
COL4A6-208ENST00000538570 FANCMQ8IYD8 2048 aa7.88□□□□□ -1.15
COL4A6-208ENST00000538570 IGKV1-39P01597 117 aa7.88□□□□□ -1.15
COL4A6-208ENST00000538570 IGKV1D-39P04432 117 aa7.88□□□□□ -1.15
COL4A6-208ENST00000538570 LINC00694P0DN24 101 aa7.88□□□□□ -1.15
COL4A6-208ENST00000538570 IGHV7-4-1A0A0J9YVY3 117 aa7.87□□□□□ -1.15
COL4A6-208ENST00000538570 RNASE13Q5GAN3 156 aaKnown RBP7.87□□□□□ -1.15
COL4A6-208ENST00000538570 ZNF747Q9BV97 191 aa7.87□□□□□ -1.15
COL4A6-208ENST00000538570 CLPSL2Q6UWE3 100 aa7.87□□□□□ -1.15
COL4A6-208ENST00000538570 MRPL53Q96EL3 112 aaKnown RBP7.87□□□□□ -1.15
COL4A6-208ENST00000538570 ORMDL1Q9P0S3 153 aa7.87□□□□□ -1.15
COL4A6-208ENST00000538570 A0A096LPF7 62 aa7.87□□□□□ -1.15
COL4A6-208ENST00000538570 LHBP01229 141 aa7.87□□□□□ -1.15
COL4A6-208ENST00000538570 LOXP28300 417 aaPredicted RBP7.87□□□□□ -1.15
COL4A6-208ENST00000538570 WT1-ASQ06250 92 aa7.87□□□□□ -1.15
COL4A6-208ENST00000538570 ASPHD1Q5U4P2 390 aa7.87□□□□□ -1.15
COL4A6-208ENST00000538570 CCDC179H3BU77 68 aa7.87□□□□□ -1.15
COL4A6-208ENST00000538570 C11orf52Q96A22 123 aa7.87□□□□□ -1.15
COL4A6-208ENST00000538570 FAM110AQ9BQ89 295 aa7.87□□□□□ -1.15
COL4A6-208ENST00000538570 SCN5AQ14524 2016 aa7.87□□□□□ -1.15
COL4A6-208ENST00000538570 NDUFA7O95182 113 aa7.87□□□□□ -1.15
COL4A6-208ENST00000538570 Q96MF0 132 aa7.87□□□□□ -1.15
COL4A6-208ENST00000538570 TPSG1Q9NRR2 321 aa7.87□□□□□ -1.15
COL4A6-208ENST00000538570 LTAP01374 205 aa7.86□□□□□ -1.15
COL4A6-208ENST00000538570 RHOHQ15669 191 aa7.86□□□□□ -1.15
COL4A6-208ENST00000538570 OXLD1Q5BKU9 147 aa7.86□□□□□ -1.15
COL4A6-208ENST00000538570 E9PQ18 207 aa7.86□□□□□ -1.15
COL4A6-208ENST00000538570 J3QLI3 93 aa7.86□□□□□ -1.15
COL4A6-208ENST00000538570 NUPR1O60356 82 aa7.86□□□□□ -1.15
COL4A6-208ENST00000538570 CR1LQ2VPA4 569 aa7.86□□□□□ -1.15
COL4A6-208ENST00000538570 Q6ZR03 302 aa7.86□□□□□ -1.15
COL4A6-208ENST00000538570 MAPK1IP1LQ8NDC0 245 aa7.86□□□□□ -1.15
COL4A6-208ENST00000538570 CACNA1GO43497 2377 aa7.86□□□□□ -1.15
COL4A6-208ENST00000538570 ZNF493Q6ZR52 646 aa7.86□□□□□ -1.15
COL4A6-208ENST00000538570 K7EMI3 77 aa7.86□□□□□ -1.15
COL4A6-208ENST00000538570 K7EN84 100 aa7.86□□□□□ -1.15
COL4A6-208ENST00000538570 WDR86Q86TI4 376 aa7.86□□□□□ -1.15
COL4A6-208ENST00000538570 C15orf65H3BRN8 121 aa7.85□□□□□ -1.15
COL4A6-208ENST00000538570 YLPM1P49750 1951 aaKnown RBP7.85□□□□□ -1.15
COL4A6-208ENST00000538570 UBE2BP63146 152 aa7.85□□□□□ -1.15
COL4A6-208ENST00000538570 DEFB105AQ8NG35 78 aa7.85□□□□□ -1.15
COL4A6-208ENST00000538570 BUB3O43684 328 aa7.85□□□□□ -1.15
COL4A6-208ENST00000538570 MLST8Q9BVC4 326 aa7.85□□□□□ -1.15
COL4A6-208ENST00000538570 AKAP6Q13023 2319 aa7.85□□□□□ -1.15
COL4A6-208ENST00000538570 XCL1P47992 114 aa7.85□□□□□ -1.15
COL4A6-208ENST00000538570 SLC25A29Q8N8R3 303 aa7.85□□□□□ -1.15
COL4A6-208ENST00000538570 PRR30Q53SZ7 412 aaPredicted RBP7.84□□□□□ -1.15
COL4A6-208ENST00000538570 LYPD6Q86Y78 171 aa7.84□□□□□ -1.15
COL4A6-208ENST00000538570 C1orf147Q96MC9 270 aaPredicted RBP7.84□□□□□ -1.15
COL4A6-208ENST00000538570 Q9H8V8 135 aa7.84□□□□□ -1.15
COL4A6-208ENST00000538570 SPTBN1Q01082 2364 aaKnown RBP7.84□□□□□ -1.15
COL4A6-208ENST00000538570 H3BUA1 57 aa7.84□□□□□ -1.15
COL4A6-208ENST00000538570 ELANEP08246 267 aa7.84□□□□□ -1.16
COL4A6-208ENST00000538570 IGLV3-9A0A075B6K5 115 aa7.83□□□□□ -1.16
COL4A6-208ENST00000538570 IGKV2D-24A0A075B6R9 120 aa7.83□□□□□ -1.16
COL4A6-208ENST00000538570 WIPF2Q8TF74 440 aaPredicted RBP7.83□□□□□ -1.16
COL4A6-208ENST00000538570 FER1L5A0AVI2 2057 aa7.83□□□□□ -1.16
COL4A6-208ENST00000538570 IGKV1OR2-108A0A075B7D4 117 aa7.83□□□□□ -1.16
COL4A6-208ENST00000538570 ETV2O00321 342 aaPredicted RBP7.83□□□□□ -1.16
COL4A6-208ENST00000538570 FAM120AOSQ5T036 256 aa7.83□□□□□ -1.16
COL4A6-208ENST00000538570 NOP10Q9NPE3 64 aaKnown RBP7.83□□□□□ -1.16
COL4A6-208ENST00000538570 PTPRDP23468 1912 aa7.83□□□□□ -1.16
COL4A6-208ENST00000538570 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.83□□□□□ -1.16
COL4A6-208ENST00000538570 IGKV2-29A2NJV5 120 aaPredicted RBP7.83□□□□□ -1.16
COL4A6-208ENST00000538570 RBAKDNA6NC62 111 aa7.83□□□□□ -1.16
COL4A6-208ENST00000538570 GNRH2O43555 120 aa7.83□□□□□ -1.16
COL4A6-208ENST00000538570 MYO7BQ6PIF6 2116 aa7.83□□□□□ -1.16
COL4A6-208ENST00000538570 CHD3Q12873 2000 aaKnown RBP7.83□□□□□ -1.16
COL4A6-208ENST00000538570 K7ENP7 123 aa7.83□□□□□ -1.16
COL4A6-208ENST00000538570 FXYD2P54710 66 aa7.83□□□□□ -1.16
COL4A6-208ENST00000538570 ZNF491Q8N8L2 437 aa7.83□□□□□ -1.16
COL4A6-208ENST00000538570 CSDC2Q9Y534 153 aaKnown RBP7.82□□□□□ -1.16
COL4A6-208ENST00000538570 TIMM17BO60830 172 aa7.82□□□□□ -1.16
COL4A6-208ENST00000538570 LINC01545Q5VT33 79 aa7.82□□□□□ -1.16
COL4A6-208ENST00000538570 DYNAPQ8N1N2 210 aa7.82□□□□□ -1.16
COL4A6-208ENST00000538570 C14orf132Q9NPU4 83 aa7.82□□□□□ -1.16
COL4A6-208ENST00000538570 KIAA2026Q5HYC2 2103 aa7.82□□□□□ -1.16
COL4A6-208ENST00000538570 HEATR1Q9H583 2144 aaKnown RBP7.82□□□□□ -1.16
COL4A6-208ENST00000538570 FUSP35637 526 aaKnown RBP eCLIP7.82□□□□□ -1.16
COL4A6-208ENST00000538570 PRR20EP86478 221 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms