RNA–Protein interactions for RNA: ENST00000537103.2

IFT88-207, Transcript of intraflagellar transport 88, humanhuman

TSL 5

Gene IFT88, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-207ENST00000537103 CSNK1G2-AS1Q8NCQ2 148 aa4.81□□□□□ -1.64
IFT88-207ENST00000537103 RARRES2Q99969 163 aa4.81□□□□□ -1.64
IFT88-207ENST00000537103 NDFIP1Q9BT67 221 aa4.81□□□□□ -1.64
IFT88-207ENST00000537103 MAP1LC3CQ9BXW4 147 aa4.81□□□□□ -1.64
IFT88-207ENST00000537103 EPDR1Q9UM22 224 aa4.81□□□□□ -1.64
IFT88-207ENST00000537103 LY96Q9Y6Y9 160 aa4.81□□□□□ -1.64
IFT88-207ENST00000537103 IGHV3OR16-8A0A075B7F1 116 aa4.81□□□□□ -1.64
IFT88-207ENST00000537103 TMEM250H0YL14 139 aa4.81□□□□□ -1.64
IFT88-207ENST00000537103 SLC17A3O00476 420 aa4.81□□□□□ -1.64
IFT88-207ENST00000537103 HAGHQ16775 308 aa4.81□□□□□ -1.64
IFT88-207ENST00000537103 PIK3CD-AS1Q5SR53 167 aa4.81□□□□□ -1.64
IFT88-207ENST00000537103 Q6AWC8 147 aa4.81□□□□□ -1.64
IFT88-207ENST00000537103 SSX7Q7RTT5 188 aa4.81□□□□□ -1.64
IFT88-207ENST00000537103 VAX2Q9UIW0 290 aa4.81□□□□□ -1.64
IFT88-207ENST00000537103 ZNF705FA8MVS1 300 aaPredicted RBP4.8□□□□□ -1.64
IFT88-207ENST00000537103 TCRAP04437 139 aa4.8□□□□□ -1.64
IFT88-207ENST00000537103 ZNF705DP0CH99 300 aaPredicted RBP4.8□□□□□ -1.64
IFT88-207ENST00000537103 ZNF705BP0CI00 300 aaPredicted RBP4.8□□□□□ -1.64
IFT88-207ENST00000537103 CCL20P78556 96 aa4.8□□□□□ -1.64
IFT88-207ENST00000537103 ICAM4Q14773 271 aa4.8□□□□□ -1.64
IFT88-207ENST00000537103 TMEM183BQ1AE95 376 aa4.8□□□□□ -1.64
IFT88-207ENST00000537103 ZNF506Q5JVG8 444 aa4.8□□□□□ -1.64
IFT88-207ENST00000537103 SFT2D1Q8WV19 159 aa4.8□□□□□ -1.64
IFT88-207ENST00000537103 RCHY1Q96PM5 261 aa4.8□□□□□ -1.64
IFT88-207ENST00000537103 NIPBLQ6KC79 2804 aaeCLIP4.8□□□□□ -1.64
IFT88-207ENST00000537103 IGHV3OR16-13A0A075B7E8 117 aa4.8□□□□□ -1.64
IFT88-207ENST00000537103 IGHV3-74A0A0B4J1X5 117 aa4.8□□□□□ -1.64
IFT88-207ENST00000537103 PGPA6NDG6 321 aa4.8□□□□□ -1.64
IFT88-207ENST00000537103 COLCA2A8K830 154 aa4.8□□□□□ -1.64
IFT88-207ENST00000537103 H7BYZ3 331 aa4.8□□□□□ -1.64
IFT88-207ENST00000537103 C5orf47Q569G3 176 aa4.8□□□□□ -1.64
IFT88-207ENST00000537103 LINC00518Q8N0U6 118 aa4.8□□□□□ -1.64
IFT88-207ENST00000537103 PRR26Q8N8Z3 221 aa4.8□□□□□ -1.64
IFT88-207ENST00000537103 C18orf15Q96N68 181 aa4.8□□□□□ -1.64
IFT88-207ENST00000537103 PYGO2Q9BRQ0 406 aa4.8□□□□□ -1.64
IFT88-207ENST00000537103 SMCO4Q9NRQ5 59 aa4.8□□□□□ -1.64
IFT88-207ENST00000537103 C7orf77A4D0Y5 90 aa4.79□□□□□ -1.64
IFT88-207ENST00000537103 C9orf118A6NHY6 69 aa4.79□□□□□ -1.64
IFT88-207ENST00000537103 PEX7O00628 323 aa4.79□□□□□ -1.64
IFT88-207ENST00000537103 MED14OSP0DP75 135 aa4.79□□□□□ -1.64
IFT88-207ENST00000537103 BCL2P10415 239 aa4.79□□□□□ -1.64
IFT88-207ENST00000537103 VAMP3Q15836 100 aa4.79□□□□□ -1.64
IFT88-207ENST00000537103 IBA57Q5T440 356 aaKnown RBP4.79□□□□□ -1.64
IFT88-207ENST00000537103 DNHD1Q96M86 4753 aa4.79□□□□□ -1.64
IFT88-207ENST00000537103 C9JCJ5 164 aa4.79□□□□□ -1.64
IFT88-207ENST00000537103 EIF3GO75821 320 aaKnown RBP eCLIP4.79□□□□□ -1.64
IFT88-207ENST00000537103 GIG44P09565 113 aaPredicted RBP4.79□□□□□ -1.64
IFT88-207ENST00000537103 TFPI2P48307 235 aa4.79□□□□□ -1.64
IFT88-207ENST00000537103 FGF8P55075 233 aaPredicted RBP4.79□□□□□ -1.64
IFT88-207ENST00000537103 HIST1H1AQ02539 215 aaPredicted RBP4.79□□□□□ -1.64
IFT88-207ENST00000537103 TDRG1Q3Y452 100 aa4.79□□□□□ -1.64
IFT88-207ENST00000537103 ACTL10Q5JWF8 245 aa4.79□□□□□ -1.64
IFT88-207ENST00000537103 C7orf71A4D174 169 aa4.78□□□□□ -1.64
IFT88-207ENST00000537103 GGTLC3B5MD39 225 aa4.78□□□□□ -1.64
IFT88-207ENST00000537103 CT45A10P0DMU9 189 aa4.78□□□□□ -1.64
IFT88-207ENST00000537103 RPL13AP40429 203 aaKnown RBP4.78□□□□□ -1.64
IFT88-207ENST00000537103 TCTAP57738 103 aa4.78□□□□□ -1.64
IFT88-207ENST00000537103 BLNKQ8WV28 456 aa4.78□□□□□ -1.64
IFT88-207ENST00000537103 FAM210BQ96KR6 192 aa4.78□□□□□ -1.64
IFT88-207ENST00000537103 C12orf57Q99622 126 aa4.78□□□□□ -1.64
IFT88-207ENST00000537103 OVOL2Q9BRP0 275 aa4.78□□□□□ -1.64
IFT88-207ENST00000537103 AGPAT4-IT1Q9H0P7 198 aa4.78□□□□□ -1.64
IFT88-207ENST00000537103 SLC35B3Q9H1N7 401 aa4.78□□□□□ -1.64
IFT88-207ENST00000537103 TMPRSS5Q9H3S3 457 aa4.78□□□□□ -1.64
IFT88-207ENST00000537103 RBFOX3A6NFN3 312 aa4.78□□□□□ -1.64
IFT88-207ENST00000537103 KNCNA6PVL3 124 aa4.78□□□□□ -1.64
IFT88-207ENST00000537103 CRXO43186 299 aaPredicted RBP4.78□□□□□ -1.64
IFT88-207ENST00000537103 LTAP01374 205 aa4.78□□□□□ -1.64
IFT88-207ENST00000537103 RAB5BP61020 215 aa4.78□□□□□ -1.64
IFT88-207ENST00000537103 RANP62826 216 aaKnown RBP4.78□□□□□ -1.64
IFT88-207ENST00000537103 MEF2BQ02080 365 aaPredicted RBP4.78□□□□□ -1.64
IFT88-207ENST00000537103 C16orf74Q96GX8 76 aa4.78□□□□□ -1.64
IFT88-207ENST00000537103 KCNS1Q96KK3 526 aa4.78□□□□□ -1.64
IFT88-207ENST00000537103 PSG8Q9UQ74 426 aa4.78□□□□□ -1.64
IFT88-207ENST00000537103 YTHDF2Q9Y5A9 579 aaKnown RBP4.78□□□□□ -1.64
IFT88-207ENST00000537103 U3KQK5 164 aa4.78□□□□□ -1.64
IFT88-207ENST00000537103 TRAV21A0A0B4J279 112 aa4.77□□□□□ -1.65
IFT88-207ENST00000537103 LYRM9A8MSI8 78 aa4.77□□□□□ -1.65
IFT88-207ENST00000537103 C1orf196B1AJZ1 125 aa4.77□□□□□ -1.65
IFT88-207ENST00000537103 IGLV2-11P01706 119 aa4.77□□□□□ -1.65
IFT88-207ENST00000537103 TMEM183AQ8IXX5 376 aa4.77□□□□□ -1.65
IFT88-207ENST00000537103 EXOC3-AS1Q8N2X6 119 aa4.77□□□□□ -1.65
IFT88-207ENST00000537103 ZFAND2AQ8N6M9 145 aa4.77□□□□□ -1.65
IFT88-207ENST00000537103 C15orf54Q8N8G6 183 aa4.77□□□□□ -1.65
IFT88-207ENST00000537103 ATRQ13535 2644 aa4.77□□□□□ -1.65
IFT88-207ENST00000537103 ZNF727A8MUV8 499 aa4.77□□□□□ -1.65
IFT88-207ENST00000537103 C11orf94C9JXX5 98 aa4.77□□□□□ -1.65
IFT88-207ENST00000537103 RPS20P60866 119 aaKnown RBP4.77□□□□□ -1.65
IFT88-207ENST00000537103 DEFB121Q5J5C9 76 aa4.77□□□□□ -1.65
IFT88-207ENST00000537103 Q86TA4 180 aa4.77□□□□□ -1.65
IFT88-207ENST00000537103 SBSPONQ8IVN8 264 aa4.77□□□□□ -1.65
IFT88-207ENST00000537103 RNF182Q8N6D2 247 aa4.77□□□□□ -1.65
IFT88-207ENST00000537103 LINC00612Q8N6U2 182 aa4.77□□□□□ -1.65
IFT88-207ENST00000537103 NIPSNAP3BQ9BS92 247 aa4.77□□□□□ -1.65
IFT88-207ENST00000537103 SETD2Q9BYW2 2564 aaPredicted RBP4.76□□□□□ -1.65
IFT88-207ENST00000537103 IGKV3-7A0A075B6H7 116 aa4.76□□□□□ -1.65
IFT88-207ENST00000537103 hDV102S1A0JD36 115 aa4.76□□□□□ -1.65
IFT88-207ENST00000537103 ZNF324O75467 553 aaPredicted RBP4.76□□□□□ -1.65
IFT88-207ENST00000537103 ATP5LO75964 103 aa4.76□□□□□ -1.65
IFT88-207ENST00000537103 DAZ2Q13117 558 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms