RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 OR10G9Q8NGN4 311 aa8.72□□□□□ -1.01
PRKDC-207ENST00000536483 OR10G7Q8NGN6 311 aa8.72□□□□□ -1.01
PRKDC-207ENST00000536483 TXNDC17Q9BRA2 123 aa8.72□□□□□ -1.01
PRKDC-207ENST00000536483 NOP10Q9NPE3 64 aaKnown RBP8.72□□□□□ -1.01
PRKDC-207ENST00000536483 TP53TG3Q9ULZ0 132 aa8.72□□□□□ -1.01
PRKDC-207ENST00000536483 GPX1P07203 203 aa8.71□□□□□ -1.02
PRKDC-207ENST00000536483 HTN1P15515 57 aa8.71□□□□□ -1.02
PRKDC-207ENST00000536483 RHEBQ15382 184 aa8.71□□□□□ -1.02
PRKDC-207ENST00000536483 SMCO4Q9NRQ5 59 aa8.71□□□□□ -1.02
PRKDC-207ENST00000536483 NACAE9PAV3 2078 aa8.71□□□□□ -1.02
PRKDC-207ENST00000536483 SNURFLB1AK76 121 aa8.7□□□□□ -1.02
PRKDC-207ENST00000536483 H3BNG1 76 aa8.7□□□□□ -1.02
PRKDC-207ENST00000536483 SRP19P09132 144 aaKnown RBP8.7□□□□□ -1.02
PRKDC-207ENST00000536483 BCL2P10415 239 aa8.7□□□□□ -1.02
PRKDC-207ENST00000536483 FAM74A3Q4VXF1 159 aa8.7□□□□□ -1.02
PRKDC-207ENST00000536483 PRR9Q5T870 116 aa8.7□□□□□ -1.02
PRKDC-207ENST00000536483 ATRAIDQ6UW56 229 aa8.7□□□□□ -1.02
PRKDC-207ENST00000536483 MANBALQ9NQG1 85 aa8.7□□□□□ -1.02
PRKDC-207ENST00000536483 VAX2Q9UIW0 290 aa8.7□□□□□ -1.02
PRKDC-207ENST00000536483 MAP1LC3B2A6NCE7 125 aa8.69□□□□□ -1.02
PRKDC-207ENST00000536483 PGPA6NDG6 321 aa8.69□□□□□ -1.02
PRKDC-207ENST00000536483 B4DEV8 164 aa8.69□□□□□ -1.02
PRKDC-207ENST00000536483 C9JQL5 133 aa8.69□□□□□ -1.02
PRKDC-207ENST00000536483 RNASE4P34096 147 aaKnown RBP8.69□□□□□ -1.02
PRKDC-207ENST00000536483 CDC34P49427 236 aaPredicted RBP8.69□□□□□ -1.02
PRKDC-207ENST00000536483 TCL1AP56279 114 aa8.69□□□□□ -1.02
PRKDC-207ENST00000536483 PNRC1Q12796 327 aaPredicted RBP8.69□□□□□ -1.02
PRKDC-207ENST00000536483 Q6AWC8 147 aa8.69□□□□□ -1.02
PRKDC-207ENST00000536483 RAB24Q969Q5 203 aa8.69□□□□□ -1.02
PRKDC-207ENST00000536483 MAP1LC3BQ9GZQ8 125 aa8.69□□□□□ -1.02
PRKDC-207ENST00000536483 IGHV1OR15-1A0A075B7D0 117 aa8.68□□□□□ -1.02
PRKDC-207ENST00000536483 A0A087WWC5 75 aa8.68□□□□□ -1.02
PRKDC-207ENST00000536483 SERTM2A0A1B0GWG4 89 aa8.68□□□□□ -1.02
PRKDC-207ENST00000536483 F5H768 121 aa8.68□□□□□ -1.02
PRKDC-207ENST00000536483 TMEM250H0YL14 139 aa8.68□□□□□ -1.02
PRKDC-207ENST00000536483 J3KRW8 73 aa8.68□□□□□ -1.02
PRKDC-207ENST00000536483 SPINK4O60575 86 aa8.68□□□□□ -1.02
PRKDC-207ENST00000536483 ARL14EPLP0DKL9 152 aa8.68□□□□□ -1.02
PRKDC-207ENST00000536483 CCL20P78556 96 aa8.68□□□□□ -1.02
PRKDC-207ENST00000536483 TNP2Q05952 138 aa8.68□□□□□ -1.02
PRKDC-207ENST00000536483 TDRG1Q3Y452 100 aa8.68□□□□□ -1.02
PRKDC-207ENST00000536483 C15orf54Q8N8G6 183 aa8.68□□□□□ -1.02
PRKDC-207ENST00000536483 ATG101Q9BSB4 218 aa8.68□□□□□ -1.02
PRKDC-207ENST00000536483 GSN-AS1Q9NRJ2 163 aa8.68□□□□□ -1.02
PRKDC-207ENST00000536483 DNAH5Q8TE73 4624 aa8.68□□□□□ -1.02
PRKDC-207ENST00000536483 C16orf90A8MZG2 172 aa8.67□□□□□ -1.02
PRKDC-207ENST00000536483 EIF3GO75821 320 aaKnown RBP eCLIP8.67□□□□□ -1.02
PRKDC-207ENST00000536483 APOBP04114 4563 aaKnown RBP8.67□□□□□ -1.02
PRKDC-207ENST00000536483 ZNF726P1Q15940 193 aa8.67□□□□□ -1.02
PRKDC-207ENST00000536483 Q8TAT8 98 aa8.67□□□□□ -1.02
PRKDC-207ENST00000536483 CMTM2Q8TAZ6 248 aa8.67□□□□□ -1.02
PRKDC-207ENST00000536483 TMEM167BQ9NRX6 74 aa8.67□□□□□ -1.02
PRKDC-207ENST00000536483 KLF12Q9Y4X4 402 aa8.67□□□□□ -1.02
PRKDC-207ENST00000536483 ARL2-SNX15V9GYD0 113 aa8.67□□□□□ -1.02
PRKDC-207ENST00000536483 CXorf1O96002 111 aa8.66□□□□□ -1.02
PRKDC-207ENST00000536483 HOXA5P20719 270 aa8.66□□□□□ -1.02
PRKDC-207ENST00000536483 GCHFRP30047 84 aa8.66□□□□□ -1.02
PRKDC-207ENST00000536483 Q6ZQT7 251 aa8.66□□□□□ -1.02
PRKDC-207ENST00000536483 Q6ZTI0 123 aa8.66□□□□□ -1.02
PRKDC-207ENST00000536483 C5orf17Q8NAS9 161 aa8.66□□□□□ -1.02
PRKDC-207ENST00000536483 TVP23CQ96ET8 276 aa8.66□□□□□ -1.02
PRKDC-207ENST00000536483 TMEM242Q9NWH2 141 aa8.66□□□□□ -1.02
PRKDC-207ENST00000536483 GNG13Q9P2W3 67 aa8.66□□□□□ -1.02
PRKDC-207ENST00000536483 TMA7Q9Y2S6 64 aaKnown RBP8.66□□□□□ -1.02
PRKDC-207ENST00000536483 NBDYA0A0U1RRE5 68 aa8.65□□□□□ -1.02
PRKDC-207ENST00000536483 A0A1W2PRE2 83 aa8.65□□□□□ -1.02
PRKDC-207ENST00000536483 GAGE12BA1L429 117 aa8.65□□□□□ -1.02
PRKDC-207ENST00000536483 C7orf77A4D0Y5 90 aa8.65□□□□□ -1.02
PRKDC-207ENST00000536483 FBLL1A6NHQ2 334 aaKnown RBP8.65□□□□□ -1.02
PRKDC-207ENST00000536483 FAM74A7A6NL05 159 aa8.65□□□□□ -1.02
PRKDC-207ENST00000536483 GAGE7O76087 117 aa8.65□□□□□ -1.02
PRKDC-207ENST00000536483 GAGE12FP0CL80 117 aa8.65□□□□□ -1.02
PRKDC-207ENST00000536483 GAGE12GP0CL81 117 aa8.65□□□□□ -1.02
PRKDC-207ENST00000536483 GAGE12IP0CL82 117 aa8.65□□□□□ -1.02
PRKDC-207ENST00000536483 ZNRF2Q8NHG8 242 aa8.65□□□□□ -1.02
PRKDC-207ENST00000536483 M0R036 132 aa8.64□□□□□ -1.03
PRKDC-207ENST00000536483 HMGB3O15347 200 aaKnown RBP8.64□□□□□ -1.03
PRKDC-207ENST00000536483 PDE6DO43924 150 aa8.64□□□□□ -1.03
PRKDC-207ENST00000536483 NUDT3O95989 172 aa8.64□□□□□ -1.03
PRKDC-207ENST00000536483 MT-ND4LP03901 98 aa8.64□□□□□ -1.03
PRKDC-207ENST00000536483 TCRAP04437 139 aa8.64□□□□□ -1.03
PRKDC-207ENST00000536483 MEF2BQ02080 365 aaPredicted RBP8.64□□□□□ -1.03
PRKDC-207ENST00000536483 GOLT1AQ6ZVE7 132 aa8.64□□□□□ -1.03
PRKDC-207ENST00000536483 C6orf223Q8N319 242 aa8.64□□□□□ -1.03
PRKDC-207ENST00000536483 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.64□□□□□ -1.03
PRKDC-207ENST00000536483 RASL10AQ92737 203 aa8.64□□□□□ -1.03
PRKDC-207ENST00000536483 SPXQ9BT56 116 aa8.64□□□□□ -1.03
PRKDC-207ENST00000536483 RPS10P5Q9NQ39 176 aa8.64□□□□□ -1.03
PRKDC-207ENST00000536483 EPDR1Q9UM22 224 aa8.64□□□□□ -1.03
PRKDC-207ENST00000536483 TRAV26-1A0A087WT03 109 aa8.63□□□□□ -1.03
PRKDC-207ENST00000536483 A0A1B0GV50 99 aa8.63□□□□□ -1.03
PRKDC-207ENST00000536483 GGTLC3B5MD39 225 aa8.63□□□□□ -1.03
PRKDC-207ENST00000536483 F6UZH7 168 aa8.63□□□□□ -1.03
PRKDC-207ENST00000536483 CDK2AP2O75956 126 aa8.63□□□□□ -1.03
PRKDC-207ENST00000536483 IGLV2-11P01706 119 aa8.63□□□□□ -1.03
PRKDC-207ENST00000536483 FLI1Q01543 452 aaPredicted RBP8.63□□□□□ -1.03
PRKDC-207ENST00000536483 SSX7Q7RTT5 188 aa8.63□□□□□ -1.03
PRKDC-207ENST00000536483 IQCF2Q8IXL9 164 aa8.63□□□□□ -1.03
PRKDC-207ENST00000536483 MAPKAPK5-AS1Q8N8E1 139 aa8.63□□□□□ -1.03
PRKDC-207ENST00000536483 CYB561D1Q8N8Q1 229 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms