RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 OR4E1P0C645 316 aa2.23□□□□□ -2.05
YBX3-205ENST00000536107 SPCS3P61009 180 aa2.23□□□□□ -2.05
YBX3-205ENST00000536107 BSXQ3C1V8 233 aa2.23□□□□□ -2.05
YBX3-205ENST00000536107 PRR27Q6MZM9 219 aa2.23□□□□□ -2.05
YBX3-205ENST00000536107 AQP12AQ8IXF9 295 aa2.23□□□□□ -2.05
YBX3-205ENST00000536107 BEST4Q8NFU0 473 aa2.23□□□□□ -2.05
YBX3-205ENST00000536107 MARCH1Q8TCQ1 289 aa2.23□□□□□ -2.05
YBX3-205ENST00000536107 CHCHD7Q9BUK0 85 aa2.23□□□□□ -2.05
YBX3-205ENST00000536107 NAGKQ9UJ70 344 aa2.23□□□□□ -2.05
YBX3-205ENST00000536107 IGKV1D-37A0A075B6S9 117 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 A0A087WZ39 114 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 H3BTX0 84 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 M0R2P5 195 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 ZNF253O75346 499 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 EIF3GO75821 320 aaKnown RBP eCLIP2.22□□□□□ -2.05
YBX3-205ENST00000536107 NDUFB4O95168 129 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 IGKV1-39P01597 117 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 IGKV1D-39P04432 117 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 RAB5CP51148 216 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 ERCC8Q13216 396 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 KRTAP19-2Q3LHN2 52 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 DHRS11Q6UWP2 260 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 FAM159AQ6UWV7 190 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 LCN15Q6UWW0 184 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 ACOT7LQ6ZUV0 252 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 KCNS1Q96KK3 526 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 ATP6V1G3Q96LB4 118 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 OPRPNQ99935 248 aaPredicted RBP2.22□□□□□ -2.05
YBX3-205ENST00000536107 ZNF2Q9BSG1 426 aaPredicted RBP2.22□□□□□ -2.05
YBX3-205ENST00000536107 SRRQ9GZT4 340 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 AUNIPQ9H7T9 357 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 SLC39A9Q9NUM3 307 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 HIGD1AQ9Y241 93 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 PKIGQ9Y2B9 76 aa2.22□□□□□ -2.05
YBX3-205ENST00000536107 MDN1Q9NU22 5596 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 A0A087X0K7 114 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 IRGMA1A4Y4 181 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 C5orf52A6NGY3 159 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 KLLNB2CW77 178 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 NOL3O60936 208 aaKnown RBP2.21□□□□□ -2.06
YBX3-205ENST00000536107 TSHBP01222 138 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 IGKV1-5P01602 117 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 OR5G3P0C626 314 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 KRTAP2-3P0C7H8 128 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 HSMCR30P0CW71 290 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 GPX4P36969 197 aaPredicted RBP2.21□□□□□ -2.06
YBX3-205ENST00000536107 INPP1P49441 399 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 UBE2MP61081 183 aaKnown RBP2.21□□□□□ -2.06
YBX3-205ENST00000536107 RIGQ13278 110 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 HIGD2BQ4VC39 106 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 GPR107Q5VW38 600 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 EIF5AL1Q6IS14 154 aaKnown RBP2.21□□□□□ -2.06
YBX3-205ENST00000536107 PQLC2Q6ZP29 291 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 S100A7AQ86SG5 101 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 ZNF546Q86UE3 836 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 CYGBQ8WWM9 190 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 TMEM80Q96HE8 168 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 TRGV9Q99603 122 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 ATP5SQ99766 215 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 SHANK2-AS3Q9BTD1 123 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 KRTAP2-4Q9BYR9 128 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 GABARAPL1Q9H0R8 117 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 ZNF331Q9NQX6 463 aaPredicted RBP2.21□□□□□ -2.06
YBX3-205ENST00000536107 EXTL2Q9UBQ6 330 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 PAIP2BQ9ULR5 123 aaKnown RBP2.21□□□□□ -2.06
YBX3-205ENST00000536107 V9GY05 133 aa2.21□□□□□ -2.06
YBX3-205ENST00000536107 A0A087X002 238 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 H3BRN7 92 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 MYL12BO14950 172 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 SSX5O60225 188 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 CIDEAO60543 219 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 HYPMO75409 117 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 MGST1P10620 155 aaKnown RBP2.2□□□□□ -2.06
YBX3-205ENST00000536107 PGAM2P15259 253 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 CXCL2P19875 107 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 FGF8P55075 233 aaPredicted RBP2.2□□□□□ -2.06
YBX3-205ENST00000536107 SRPXP78539 464 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 GAGE2BQ13066 116 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 CTF1Q16619 201 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 TMEM78Q5T7P6 136 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 CFAP126Q5VTH2 177 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 HOGA1Q86XE5 327 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 LINC00269Q8N2A0 174 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 OR5AP2Q8NGF4 316 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 OR13C8Q8NGS7 320 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 OR2T35Q8NGX2 323 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 OR2G3Q8NGZ4 309 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 OR1S1Q8NH92 325 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 RHOXF1Q8NHV9 184 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 OCC1Q8TAD7 63 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 MRPL53Q96EL3 112 aaKnown RBP2.2□□□□□ -2.06
YBX3-205ENST00000536107 GFI1Q99684 422 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 CHCHD5Q9BSY4 110 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.2□□□□□ -2.06
YBX3-205ENST00000536107 DIMT1Q9UNQ2 313 aaKnown RBP2.2□□□□□ -2.06
YBX3-205ENST00000536107 RNF24Q9Y225 148 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 PXMP4Q9Y6I8 212 aa2.2□□□□□ -2.06
YBX3-205ENST00000536107 IGLV8-61A0A075B6I0 122 aa2.19□□□□□ -2.06
YBX3-205ENST00000536107 SLC17A3O00476 420 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms