RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 FCER1GP30273 86 aa10.02□□□□□ -0.81
LDLR-203ENST00000535915 RPL11P62913 178 aaKnown RBP10.02□□□□□ -0.81
LDLR-203ENST00000535915 PRR9Q5T870 116 aa10.02□□□□□ -0.81
LDLR-203ENST00000535915 NPFFR1Q9GZQ6 430 aa10.02□□□□□ -0.81
LDLR-203ENST00000535915 KLK15Q9H2R5 256 aa10.02□□□□□ -0.81
LDLR-203ENST00000535915 BLCAPP62952 87 aa10.02□□□□□ -0.81
LDLR-203ENST00000535915 GPHB5Q86YW7 130 aa10.02□□□□□ -0.81
LDLR-203ENST00000535915 USMG5Q96IX5 58 aa10.02□□□□□ -0.81
LDLR-203ENST00000535915 DKK2Q9UBU2 259 aa10.02□□□□□ -0.81
LDLR-203ENST00000535915 A6NDX4 124 aa10.01□□□□□ -0.81
LDLR-203ENST00000535915 H3BUT2 72 aa10.01□□□□□ -0.81
LDLR-203ENST00000535915 H3BVH4 76 aa10.01□□□□□ -0.81
LDLR-203ENST00000535915 SEC11AP67812 179 aa10.01□□□□□ -0.81
LDLR-203ENST00000535915 UFSP1Q6NVU6 142 aa10.01□□□□□ -0.81
LDLR-203ENST00000535915 OR2K2Q8NGT1 345 aa10.01□□□□□ -0.81
LDLR-203ENST00000535915 OR10J6PQ8NGY7 276 aa10.01□□□□□ -0.81
LDLR-203ENST00000535915 TRAV26-2A0A0B4J265 109 aa10.01□□□□□ -0.81
LDLR-203ENST00000535915 FGF6P10767 208 aa10.01□□□□□ -0.81
LDLR-203ENST00000535915 LCNL1Q6ZST4 164 aa10.01□□□□□ -0.81
LDLR-203ENST00000535915 Q8N8P6 123 aa10.01□□□□□ -0.81
LDLR-203ENST00000535915 OR4X2Q8NGF9 303 aa10.01□□□□□ -0.81
LDLR-203ENST00000535915 NAA38Q9BRA0 125 aaKnown RBP10.01□□□□□ -0.81
LDLR-203ENST00000535915 LENEPQ9Y5L5 61 aa10.01□□□□□ -0.81
LDLR-203ENST00000535915 PIEZO1Q92508 2521 aa10.01□□□□□ -0.81
LDLR-203ENST00000535915 H3BUA1 57 aa10□□□□□ -0.81
LDLR-203ENST00000535915 MSMBP08118 114 aa10□□□□□ -0.81
LDLR-203ENST00000535915 TMEM97Q5BJF2 176 aa10□□□□□ -0.81
LDLR-203ENST00000535915 Q6ZS46 218 aa10□□□□□ -0.81
LDLR-203ENST00000535915 TMEM158Q8WZ71 300 aa10□□□□□ -0.81
LDLR-203ENST00000535915 LINC00477Q96M19 166 aa10□□□□□ -0.81
LDLR-203ENST00000535915 IGKV3-7A0A075B6H7 116 aa10□□□□□ -0.81
LDLR-203ENST00000535915 DEFB1P60022 68 aa10□□□□□ -0.81
LDLR-203ENST00000535915 A0A1B0GV72 72 aa9.99□□□□□ -0.81
LDLR-203ENST00000535915 OVOL1O14753 267 aa9.99□□□□□ -0.81
LDLR-203ENST00000535915 PRSS1P07477 247 aa9.99□□□□□ -0.81
LDLR-203ENST00000535915 IGSF10Q6WRI0 2623 aa9.99□□□□□ -0.81
LDLR-203ENST00000535915 A6NDN8 102 aa9.99□□□□□ -0.81
LDLR-203ENST00000535915 C9orf118A6NHY6 69 aa9.99□□□□□ -0.81
LDLR-203ENST00000535915 K7EP34 96 aa9.99□□□□□ -0.81
LDLR-203ENST00000535915 NMUP48645 174 aa9.99□□□□□ -0.81
LDLR-203ENST00000535915 BOD1L2Q8IYS8 172 aa9.99□□□□□ -0.81
LDLR-203ENST00000535915 GTSF1LQ9H1H1 148 aa9.99□□□□□ -0.81
LDLR-203ENST00000535915 IGLV2-18A0A075B6J9 118 aa9.98□□□□□ -0.81
LDLR-203ENST00000535915 IGHV4-4A0A075B6R2 117 aa9.98□□□□□ -0.81
LDLR-203ENST00000535915 SOCS3O14543 225 aa9.98□□□□□ -0.81
LDLR-203ENST00000535915 BRI3O95415 125 aa9.98□□□□□ -0.81
LDLR-203ENST00000535915 RPL24P83731 157 aaKnown RBP9.98□□□□□ -0.81
LDLR-203ENST00000535915 SMAGPQ0VAQ4 97 aa9.98□□□□□ -0.81
LDLR-203ENST00000535915 NEGR1Q7Z3B1 354 aa9.98□□□□□ -0.81
LDLR-203ENST00000535915 NRACQ8N912 160 aa9.98□□□□□ -0.81
LDLR-203ENST00000535915 CSPG4Q6UVK1 2322 aa9.98□□□□□ -0.81
LDLR-203ENST00000535915 CSMD2Q7Z408 3487 aa9.98□□□□□ -0.81
LDLR-203ENST00000535915 USP9XQ93008 2570 aaPredicted RBP9.98□□□□□ -0.81
LDLR-203ENST00000535915 AZU1P20160 251 aa9.98□□□□□ -0.81
LDLR-203ENST00000535915 ZFAND2AQ8N6M9 145 aa9.98□□□□□ -0.81
LDLR-203ENST00000535915 JMJD8Q96S16 334 aa9.98□□□□□ -0.81
LDLR-203ENST00000535915 DOPEY1Q5JWR5 2465 aa9.98□□□□□ -0.81
LDLR-203ENST00000535915 TRAV21A0A0B4J279 112 aa9.97□□□□□ -0.81
LDLR-203ENST00000535915 ODF1Q14990 250 aa9.97□□□□□ -0.81
LDLR-203ENST00000535915 TM4SF20Q53R12 229 aa9.97□□□□□ -0.81
LDLR-203ENST00000535915 A0A0G2JLM5 398 aa9.97□□□□□ -0.81
LDLR-203ENST00000535915 F6UB75 175 aa9.97□□□□□ -0.81
LDLR-203ENST00000535915 H3BRM9 83 aa9.97□□□□□ -0.81
LDLR-203ENST00000535915 M0R381 172 aa9.97□□□□□ -0.81
LDLR-203ENST00000535915 S100A4P26447 101 aaKnown RBP9.97□□□□□ -0.81
LDLR-203ENST00000535915 RAB37Q96AX2 223 aa9.97□□□□□ -0.81
LDLR-203ENST00000535915 RHPN1-AS1Q9BWJ2 59 aa9.97□□□□□ -0.81
LDLR-203ENST00000535915 A1L4Q6 167 aa9.97□□□□□ -0.81
LDLR-203ENST00000535915 LAGE3Q14657 143 aa9.97□□□□□ -0.81
LDLR-203ENST00000535915 PCP2Q8IVA1 136 aa9.97□□□□□ -0.81
LDLR-203ENST00000535915 SIGMAR1Q99720 223 aa9.97□□□□□ -0.81
LDLR-203ENST00000535915 FOXC2Q99958 501 aa9.97□□□□□ -0.81
LDLR-203ENST00000535915 SPRY2O43597 315 aa9.96□□□□□ -0.81
LDLR-203ENST00000535915 AVPP01185 164 aa9.96□□□□□ -0.81
LDLR-203ENST00000535915 IGLV1-40P01703 118 aa9.96□□□□□ -0.81
LDLR-203ENST00000535915 SMIM17P0DL12 118 aa9.96□□□□□ -0.81
LDLR-203ENST00000535915 RNASE4P34096 147 aaKnown RBP9.96□□□□□ -0.81
LDLR-203ENST00000535915 OR9G4Q8NGQ1 327 aa9.96□□□□□ -0.81
LDLR-203ENST00000535915 SPCS1Q9Y6A9 102 aa9.96□□□□□ -0.82
LDLR-203ENST00000535915 CACNA1AO00555 2505 aa9.95□□□□□ -0.82
LDLR-203ENST00000535915 B4DSR2 109 aa9.95□□□□□ -0.82
LDLR-203ENST00000535915 SCGB1A1P11684 91 aa9.95□□□□□ -0.82
LDLR-203ENST00000535915 ASIPP42127 132 aa9.95□□□□□ -0.82
LDLR-203ENST00000535915 DAZ1Q9NQZ3 744 aaKnown RBP9.95□□□□□ -0.82
LDLR-203ENST00000535915 ATP5LO75964 103 aa9.95□□□□□ -0.82
LDLR-203ENST00000535915 IGKCP01834 107 aa9.95□□□□□ -0.82
LDLR-203ENST00000535915 SRD5A1P18405 259 aa9.95□□□□□ -0.82
LDLR-203ENST00000535915 ANXA2RQ3ZCQ2 193 aa9.95□□□□□ -0.82
LDLR-203ENST00000535915 OR5A1Q8NGJ0 315 aa9.95□□□□□ -0.82
LDLR-203ENST00000535915 MYOZ3Q8TDC0 251 aa9.95□□□□□ -0.82
LDLR-203ENST00000535915 MRAP2Q96G30 205 aa9.95□□□□□ -0.82
LDLR-203ENST00000535915 ZMAT4Q9H898 229 aa9.95□□□□□ -0.82
LDLR-203ENST00000535915 PHLDA3Q9Y5J5 127 aa9.95□□□□□ -0.82
LDLR-203ENST00000535915 MYO18BQ8IUG5 2567 aa9.95□□□□□ -0.82
LDLR-203ENST00000535915 SIVA1O15304 175 aa9.94□□□□□ -0.82
LDLR-203ENST00000535915 KIR3DS1Q14943 382 aa9.94□□□□□ -0.82
LDLR-203ENST00000535915 TMEM95Q3KNT9 176 aa9.94□□□□□ -0.82
LDLR-203ENST00000535915 NRGNQ92686 78 aa9.94□□□□□ -0.82
LDLR-203ENST00000535915 SRSF1Q07955 248 aaKnown RBP eCLIP9.94□□□□□ -0.822e-6■■□□□ 14.5
LDLR-203ENST00000535915 SCGB2A2Q13296 93 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms