RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 S100A7P31151 101 aa6.34□□□□□ -1.39
SFSWAP-202ENST00000535202 APOC4P55056 127 aa6.34□□□□□ -1.39
SFSWAP-202ENST00000535202 ODF3L2Q3SX64 289 aa6.34□□□□□ -1.39
SFSWAP-202ENST00000535202 MPV17L2Q567V2 206 aa6.34□□□□□ -1.39
SFSWAP-202ENST00000535202 PSMG4Q5JS54 123 aa6.34□□□□□ -1.39
SFSWAP-202ENST00000535202 FOXI2Q6ZQN5 318 aa6.34□□□□□ -1.39
SFSWAP-202ENST00000535202 OR11H2Q8NH07 326 aa6.34□□□□□ -1.39
SFSWAP-202ENST00000535202 AP1S3Q96PC3 154 aa6.34□□□□□ -1.39
SFSWAP-202ENST00000535202 OVOL2Q9BRP0 275 aa6.34□□□□□ -1.39
SFSWAP-202ENST00000535202 TMEM70Q9BUB7 260 aa6.34□□□□□ -1.39
SFSWAP-202ENST00000535202 TMEM191AQ9H0A3 160 aa6.34□□□□□ -1.39
SFSWAP-202ENST00000535202 NAT8BQ9UHF3 227 aa6.34□□□□□ -1.39
SFSWAP-202ENST00000535202 DNAH1Q9P2D7 4330 aa6.33□□□□□ -1.4
SFSWAP-202ENST00000535202 C7orf71A4D174 169 aa6.33□□□□□ -1.4
SFSWAP-202ENST00000535202 NDUFB4O95168 129 aa6.33□□□□□ -1.4
SFSWAP-202ENST00000535202 RNASE2P10153 161 aaKnown RBP6.33□□□□□ -1.4
SFSWAP-202ENST00000535202 OPRK1P41145 380 aa6.33□□□□□ -1.4
SFSWAP-202ENST00000535202 SUB1P53999 127 aaKnown RBP eCLIP6.33□□□□□ -1.4
SFSWAP-202ENST00000535202 HSD52Q0P140 79 aa6.33□□□□□ -1.4
SFSWAP-202ENST00000535202 ARL16Q0P5N6 197 aa6.33□□□□□ -1.4
SFSWAP-202ENST00000535202 DEFB135Q30KP9 77 aa6.33□□□□□ -1.4
SFSWAP-202ENST00000535202 Q6ZVH6 145 aa6.33□□□□□ -1.4
SFSWAP-202ENST00000535202 APRG1Q8IVJ8 170 aa6.33□□□□□ -1.4
SFSWAP-202ENST00000535202 CHCHD1Q96BP2 118 aaKnown RBP6.33□□□□□ -1.4
SFSWAP-202ENST00000535202 MRAP2Q96G30 205 aa6.33□□□□□ -1.4
SFSWAP-202ENST00000535202 SLC25A22Q9H936 323 aa6.33□□□□□ -1.4
SFSWAP-202ENST00000535202 TENM2Q9NT68 2774 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 ALMS1Q8TCU4 4167 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 TRAV8-6A0A0B4J262 113 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 IGHV3-66A0A0C4DH42 116 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 MUC21A0A0G2JKD1 596 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 A0A0J9YWU9 116 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 MUC21A0A140T8X8 626 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 UBE2L5PA0A1B0GUS4 154 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 INS-IGF2F8WCM5 200 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 ISLRO14498 428 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 SIVA1O15304 175 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 SPRY2O43597 315 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 CXorf1O96002 111 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 APCSP02743 223 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 AZU1P20160 251 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 MUC21Q5SSG8 566 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 Q6ZRM9 215 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 WFDC3Q8IUB2 231 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 STPG3Q8N7X2 389 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 OCC1Q8TAD7 63 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 GRAMD2BQ96HH9 432 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 LYSTQ99698 3801 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 SCRT2Q9NQ03 307 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 SPANXA1Q9NS26 97 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 CLEC5AQ9NY25 188 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 V9GYV3 84 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 CSMD3Q7Z407 3707 aa6.32□□□□□ -1.4
SFSWAP-202ENST00000535202 SMIM27A0A1W2PRY6 76 aa6.31□□□□□ -1.4
SFSWAP-202ENST00000535202 F2Z2F3 143 aa6.31□□□□□ -1.4
SFSWAP-202ENST00000535202 HSBP1O75506 76 aa6.31□□□□□ -1.4
SFSWAP-202ENST00000535202 NXPH3O95157 252 aa6.31□□□□□ -1.4
SFSWAP-202ENST00000535202 TSPAN13O95857 204 aa6.31□□□□□ -1.4
SFSWAP-202ENST00000535202 APOHP02749 345 aaPredicted RBP6.31□□□□□ -1.4
SFSWAP-202ENST00000535202 PLP1P60201 277 aa6.31□□□□□ -1.4
SFSWAP-202ENST00000535202 CKS1BP61024 79 aa6.31□□□□□ -1.4
SFSWAP-202ENST00000535202 RPL11P62913 178 aaKnown RBP6.31□□□□□ -1.4
SFSWAP-202ENST00000535202 MLANAQ16655 118 aa6.31□□□□□ -1.4
SFSWAP-202ENST00000535202 PVRIGQ6DKI7 326 aa6.31□□□□□ -1.4
SFSWAP-202ENST00000535202 NPCDR1Q9BY65 106 aa6.31□□□□□ -1.4
SFSWAP-202ENST00000535202 FNDC4Q9H6D8 234 aaPredicted RBP6.31□□□□□ -1.4
SFSWAP-202ENST00000535202 ZFAND3Q9H8U3 227 aa6.31□□□□□ -1.4
SFSWAP-202ENST00000535202 MAP6D1Q9H9H5 199 aa6.31□□□□□ -1.4
SFSWAP-202ENST00000535202 NPVFQ9HCQ7 196 aa6.31□□□□□ -1.4
SFSWAP-202ENST00000535202 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.31□□□□□ -1.4
SFSWAP-202ENST00000535202 MRPL36Q9P0J6 103 aaKnown RBP6.31□□□□□ -1.4
SFSWAP-202ENST00000535202 CACNG5Q9UF02 275 aa6.31□□□□□ -1.4
SFSWAP-202ENST00000535202 TP53TG1Q9Y2A0 90 aa6.31□□□□□ -1.4
SFSWAP-202ENST00000535202 HYDINQ4G0P3 5121 aa6.31□□□□□ -1.4
SFSWAP-202ENST00000535202 TRBV20OR9-2A0A075B6H5 130 aa6.3□□□□□ -1.4
SFSWAP-202ENST00000535202 M0R2Z0 102 aa6.3□□□□□ -1.4
SFSWAP-202ENST00000535202 SCGB2A1O75556 95 aa6.3□□□□□ -1.4
SFSWAP-202ENST00000535202 STAG3L2P0CL84 134 aa6.3□□□□□ -1.4
SFSWAP-202ENST00000535202 COX8AP10176 69 aa6.3□□□□□ -1.4
SFSWAP-202ENST00000535202 SRIP30626 198 aa6.3□□□□□ -1.4
SFSWAP-202ENST00000535202 GNG4P50150 75 aa6.3□□□□□ -1.4
SFSWAP-202ENST00000535202 CMC4P56277 68 aaPredicted RBP6.3□□□□□ -1.4
SFSWAP-202ENST00000535202 RAB31Q13636 194 aa6.3□□□□□ -1.4
SFSWAP-202ENST00000535202 PLECQ15149 4684 aaKnown RBP6.3□□□□□ -1.4
SFSWAP-202ENST00000535202 TMEM97Q5BJF2 176 aa6.3□□□□□ -1.4
SFSWAP-202ENST00000535202 ATP5L2Q7Z4Y8 100 aa6.3□□□□□ -1.4
SFSWAP-202ENST00000535202 SPATA12Q7Z6I5 190 aa6.3□□□□□ -1.4
SFSWAP-202ENST00000535202 OR52E5Q8NH55 327 aa6.3□□□□□ -1.4
SFSWAP-202ENST00000535202 KIR2DL5BQ8NHK3 375 aa6.3□□□□□ -1.4
SFSWAP-202ENST00000535202 RNF183Q96D59 192 aa6.3□□□□□ -1.4
SFSWAP-202ENST00000535202 ZNF479Q96JC4 524 aa6.3□□□□□ -1.4
SFSWAP-202ENST00000535202 HEYLQ9NQ87 328 aaPredicted RBP6.3□□□□□ -1.4
SFSWAP-202ENST00000535202 WDR83OSQ9Y284 106 aa6.3□□□□□ -1.4
SFSWAP-202ENST00000535202 FAM231BA6NCW3 169 aa6.29□□□□□ -1.4
SFSWAP-202ENST00000535202 GAGE12HA6NDE8 117 aa6.29□□□□□ -1.4
SFSWAP-202ENST00000535202 PMS2P5A8MQ11 134 aa6.29□□□□□ -1.4
SFSWAP-202ENST00000535202 SYS1-DBNDD2H3BUS1 97 aa6.29□□□□□ -1.4
SFSWAP-202ENST00000535202 CRYBA4P53673 196 aa6.29□□□□□ -1.4
SFSWAP-202ENST00000535202 DEFB131AP59861 70 aa6.29□□□□□ -1.4
SFSWAP-202ENST00000535202 TIGITQ495A1 244 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms