RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 TMEM75Q8N9X5 138 aa6.19□□□□□ -1.42
NEDD8-207ENST00000533242 DAZAP1Q96EP5 407 aaKnown RBP6.19□□□□□ -1.42
NEDD8-207ENST00000533242 MIEN1Q9BRT3 115 aa6.19□□□□□ -1.42
NEDD8-207ENST00000533242 TRAV41A0A0B4J266 112 aa6.18□□□□□ -1.42
NEDD8-207ENST00000533242 G3V318 75 aa6.18□□□□□ -1.42
NEDD8-207ENST00000533242 HSBP1O75506 76 aa6.18□□□□□ -1.42
NEDD8-207ENST00000533242 LGALS1P09382 135 aaKnown RBP6.18□□□□□ -1.42
NEDD8-207ENST00000533242 NUTF2P61970 127 aaKnown RBP6.18□□□□□ -1.42
NEDD8-207ENST00000533242 GFRA4Q9GZZ7 299 aa6.18□□□□□ -1.42
NEDD8-207ENST00000533242 LOC102724200A0A096LPH7 203 aaPredicted RBP6.17□□□□□ -1.42
NEDD8-207ENST00000533242 MUC21A0A0G2JKD1 596 aa6.17□□□□□ -1.42
NEDD8-207ENST00000533242 MUC21A0A140T8X8 626 aa6.17□□□□□ -1.42
NEDD8-207ENST00000533242 M0R2Z0 102 aa6.17□□□□□ -1.42
NEDD8-207ENST00000533242 ATP6V0E1O15342 81 aa6.17□□□□□ -1.42
NEDD8-207ENST00000533242 SPATA45Q537H7 98 aa6.17□□□□□ -1.42
NEDD8-207ENST00000533242 MUC21Q5SSG8 566 aa6.17□□□□□ -1.42
NEDD8-207ENST00000533242 ZNF575Q86XF7 245 aa6.17□□□□□ -1.42
NEDD8-207ENST00000533242 Q8TAT8 98 aa6.17□□□□□ -1.42
NEDD8-207ENST00000533242 IGHV4OR15-8A0A075B7B6 117 aa6.17□□□□□ -1.42
NEDD8-207ENST00000533242 A0A087WW49 117 aa6.17□□□□□ -1.42
NEDD8-207ENST00000533242 TMSB15BA0A087X1C1 80 aa6.17□□□□□ -1.42
NEDD8-207ENST00000533242 IGHV1-24A0A0C4DH33 117 aa6.17□□□□□ -1.42
NEDD8-207ENST00000533242 TRBV6-1A0A0K0K1D8 114 aa6.17□□□□□ -1.42
NEDD8-207ENST00000533242 M0R143 59 aa6.17□□□□□ -1.42
NEDD8-207ENST00000533242 ECSCRQ19T08 205 aa6.17□□□□□ -1.42
NEDD8-207ENST00000533242 LBHQ53QV2 105 aaPredicted RBP6.17□□□□□ -1.42
NEDD8-207ENST00000533242 TPPP3Q9BW30 176 aa6.17□□□□□ -1.42
NEDD8-207ENST00000533242 STARD9Q9P2P6 4700 aa6.17□□□□□ -1.42
NEDD8-207ENST00000533242 IGHV3OR16-13A0A075B7E8 117 aa6.16□□□□□ -1.42
NEDD8-207ENST00000533242 IGHV3-74A0A0B4J1X5 117 aa6.16□□□□□ -1.42
NEDD8-207ENST00000533242 IGHV3-66A0A0C4DH42 116 aa6.16□□□□□ -1.42
NEDD8-207ENST00000533242 GPR183P32249 361 aa6.16□□□□□ -1.42
NEDD8-207ENST00000533242 ZNF80P51504 273 aaPredicted RBP6.16□□□□□ -1.42
NEDD8-207ENST00000533242 CRIP2P52943 208 aaPredicted RBP6.16□□□□□ -1.42
NEDD8-207ENST00000533242 C15orf32Q32M92 178 aa6.16□□□□□ -1.42
NEDD8-207ENST00000533242 C19orf54Q5BKX5 351 aa6.16□□□□□ -1.42
NEDD8-207ENST00000533242 VGLL1Q99990 258 aa6.16□□□□□ -1.42
NEDD8-207ENST00000533242 TRAV30A0A087WSZ9 112 aa6.16□□□□□ -1.42
NEDD8-207ENST00000533242 IGLV1-51P01701 117 aa6.16□□□□□ -1.42
NEDD8-207ENST00000533242 IGLC3P0DOY3 106 aa6.16□□□□□ -1.42
NEDD8-207ENST00000533242 LYPD1Q8N2G4 141 aa6.16□□□□□ -1.42
NEDD8-207ENST00000533242 OR4B1Q8NGF8 309 aa6.16□□□□□ -1.42
NEDD8-207ENST00000533242 BORCS7Q96B45 105 aa6.16□□□□□ -1.42
NEDD8-207ENST00000533242 CCDC140Q96MF4 163 aa6.16□□□□□ -1.42
NEDD8-207ENST00000533242 ZFP30Q9Y2G7 519 aa6.16□□□□□ -1.42
NEDD8-207ENST00000533242 TMEM213A2RRL7 107 aa6.15□□□□□ -1.42
NEDD8-207ENST00000533242 FAM231BA6NCW3 169 aa6.15□□□□□ -1.42
NEDD8-207ENST00000533242 PRAC2D3DTV9 90 aa6.15□□□□□ -1.42
NEDD8-207ENST00000533242 CHEK1O14757 476 aa6.15□□□□□ -1.42
NEDD8-207ENST00000533242 CSN3P07498 182 aa6.15□□□□□ -1.42
NEDD8-207ENST00000533242 FAM106AQ4KMX7 169 aa6.15□□□□□ -1.42
NEDD8-207ENST00000533242 UNQ5815/PRO19632Q6UWF5 114 aa6.15□□□□□ -1.42
NEDD8-207ENST00000533242 ZNF502Q8TBZ5 544 aa6.15□□□□□ -1.42
NEDD8-207ENST00000533242 ZFAND3Q9H8U3 227 aa6.15□□□□□ -1.42
NEDD8-207ENST00000533242 IGHV3-49A0A0A0MS15 119 aa6.15□□□□□ -1.43
NEDD8-207ENST00000533242 A0A1B0GUT8 65 aa6.15□□□□□ -1.43
NEDD8-207ENST00000533242 SH2D1AO60880 128 aa6.15□□□□□ -1.43
NEDD8-207ENST00000533242 CLEC3BP05452 202 aa6.15□□□□□ -1.43
NEDD8-207ENST00000533242 TFPI2P48307 235 aa6.15□□□□□ -1.43
NEDD8-207ENST00000533242 RHOGP84095 191 aa6.15□□□□□ -1.43
NEDD8-207ENST00000533242 PDE6HQ13956 83 aa6.15□□□□□ -1.43
NEDD8-207ENST00000533242 BATFQ16520 125 aa6.15□□□□□ -1.43
NEDD8-207ENST00000533242 RNF182Q8N6D2 247 aa6.15□□□□□ -1.43
NEDD8-207ENST00000533242 CSMD3Q7Z407 3707 aa6.14□□□□□ -1.43
NEDD8-207ENST00000533242 TCAPO15273 167 aa6.14□□□□□ -1.43
NEDD8-207ENST00000533242 ZNF207O43670 478 aaKnown RBP6.14□□□□□ -1.43
NEDD8-207ENST00000533242 LINC00614P0C842 121 aa6.14□□□□□ -1.43
NEDD8-207ENST00000533242 BTF3P20290 206 aaKnown RBP6.14□□□□□ -1.43
NEDD8-207ENST00000533242 G0S2P27469 103 aa6.14□□□□□ -1.43
NEDD8-207ENST00000533242 ERCC8Q13216 396 aa6.14□□□□□ -1.43
NEDD8-207ENST00000533242 LYZL1Q6UWQ5 148 aa6.14□□□□□ -1.43
NEDD8-207ENST00000533242 NDFIP1Q9BT67 221 aa6.14□□□□□ -1.43
NEDD8-207ENST00000533242 AAMDCQ9H7C9 122 aa6.14□□□□□ -1.43
NEDD8-207ENST00000533242 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.14□□□□□ -1.43
NEDD8-207ENST00000533242 CLEC19AQ6UXS0 136 aa6.14□□□□□ -1.43
NEDD8-207ENST00000533242 THYN1Q9P016 225 aa6.14□□□□□ -1.43
NEDD8-207ENST00000533242 RABAC1Q9UI14 185 aa6.14□□□□□ -1.43
NEDD8-207ENST00000533242 RNF24Q9Y225 148 aa6.14□□□□□ -1.43
NEDD8-207ENST00000533242 ALMS1Q8TCU4 4167 aa6.13□□□□□ -1.43
NEDD8-207ENST00000533242 K7EQM0 130 aa6.13□□□□□ -1.43
NEDD8-207ENST00000533242 RPL7P18124 248 aaKnown RBP6.13□□□□□ -1.43
NEDD8-207ENST00000533242 RELQ04864 619 aaPredicted RBP6.13□□□□□ -1.43
NEDD8-207ENST00000533242 Q6ZQT7 251 aa6.13□□□□□ -1.43
NEDD8-207ENST00000533242 AMN1Q8IY45 258 aa6.13□□□□□ -1.43
NEDD8-207ENST00000533242 PMCHL2Q9BQD1 86 aa6.13□□□□□ -1.43
NEDD8-207ENST00000533242 hDV102S1A0JD36 115 aa6.13□□□□□ -1.43
NEDD8-207ENST00000533242 BUB3O43684 328 aa6.13□□□□□ -1.43
NEDD8-207ENST00000533242 GAS8-AS1O95177 125 aa6.13□□□□□ -1.43
NEDD8-207ENST00000533242 IGHV3-11P01762 117 aa6.13□□□□□ -1.43
NEDD8-207ENST00000533242 Q6ZN92 141 aa6.13□□□□□ -1.43
NEDD8-207ENST00000533242 STPG4Q8N801 248 aa6.13□□□□□ -1.43
NEDD8-207ENST00000533242 GATD1Q8NB37 220 aa6.13□□□□□ -1.43
NEDD8-207ENST00000533242 TMEM70Q9BUB7 260 aa6.13□□□□□ -1.43
NEDD8-207ENST00000533242 MSRB1Q9NZV6 116 aa6.13□□□□□ -1.43
NEDD8-207ENST00000533242 TIMM8BQ9Y5J9 83 aaPredicted RBP6.13□□□□□ -1.43
NEDD8-207ENST00000533242 A0A096LNJ9 63 aa6.12□□□□□ -1.43
NEDD8-207ENST00000533242 H0Y8G0 127 aa6.12□□□□□ -1.43
NEDD8-207ENST00000533242 SYS1-DBNDD2H3BUS1 97 aa6.12□□□□□ -1.43
NEDD8-207ENST00000533242 CRXO43186 299 aaPredicted RBP6.12□□□□□ -1.43
NEDD8-207ENST00000533242 LEPROTL1O95214 131 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms