RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 MRPS16Q9Y3D3 137 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-210ENST00000532925 PAM16Q9Y3D7 125 aa4.33□□□□□ -1.72
ATPAF1-210ENST00000532925 CFAP46Q8IYW2 2715 aa4.33□□□□□ -1.72
ATPAF1-210ENST00000532925 SPG11Q96JI7 2443 aa4.33□□□□□ -1.72
ATPAF1-210ENST00000532925 CSPG4Q6UVK1 2322 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 TRAV2A0A0B4J234 112 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 IGKV3D-20A0A0C4DH25 116 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 TMEM213A2RRL7 107 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 OR4C46A6NHA9 309 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 LINC01549A6NIU2 74 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 PRAC2D3DTV9 90 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 NXPH4O95158 308 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 PPP1R17O96001 155 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 HBDP02042 147 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 LGALS1P09382 135 aaKnown RBP4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 IGHV4-31P0DP07 118 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 CKS2P33552 79 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 BLCAPP62952 87 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 ERCC8Q13216 396 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 TWIST1Q15672 202 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 DEFB112Q30KQ8 113 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 LGALS9BQ3B8N2 356 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 LGALS9CQ6DKI2 356 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 ZNF705AQ6ZN79 300 aaPredicted RBP4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 AMN1Q8IY45 258 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 RNF182Q8N6D2 247 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 ZFAND2AQ8N6M9 145 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 OR8A1Q8NGG7 326 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 PRSS3P2Q8NHM4 247 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 NRGNQ92686 78 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 MRAP2Q96G30 205 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 RNF185Q96GF1 192 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 WWC2-AS2Q96NR7 200 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 PMCHL2Q9BQD1 86 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 RHPN1-AS1Q9BWJ2 59 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 SNHG12Q9BXW3 62 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 MAP1LC3AQ9H492 121 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 SIGLEC8Q9NYZ4 499 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 TACC2O95359 2948 aa4.32□□□□□ -1.72
ATPAF1-210ENST00000532925 CREBBPQ92793 2442 aa4.31□□□□□ -1.72
ATPAF1-210ENST00000532925 IGHV3OR16-8A0A075B7F1 116 aa4.31□□□□□ -1.72
ATPAF1-210ENST00000532925 KLLNB2CW77 178 aa4.31□□□□□ -1.72
ATPAF1-210ENST00000532925 HSBP1L1C9JCN9 74 aa4.31□□□□□ -1.72
ATPAF1-210ENST00000532925 M0R381 172 aa4.31□□□□□ -1.72
ATPAF1-210ENST00000532925 TGFAP01135 160 aa4.31□□□□□ -1.72
ATPAF1-210ENST00000532925 TRBV12-3P01733 135 aa4.31□□□□□ -1.72
ATPAF1-210ENST00000532925 IGHV4-59P01825 116 aa4.31□□□□□ -1.72
ATPAF1-210ENST00000532925 HNRNPA3P51991 378 aaKnown RBP4.31□□□□□ -1.72
ATPAF1-210ENST00000532925 NUTF2P61970 127 aaKnown RBP4.31□□□□□ -1.72
ATPAF1-210ENST00000532925 RPL32P62910 135 aaKnown RBP4.31□□□□□ -1.72
ATPAF1-210ENST00000532925 TDRG1Q3Y452 100 aa4.31□□□□□ -1.72
ATPAF1-210ENST00000532925 DCANP1Q8TF63 244 aa4.31□□□□□ -1.72
ATPAF1-210ENST00000532925 UBE2E2Q96LR5 201 aa4.31□□□□□ -1.72
ATPAF1-210ENST00000532925 TPPP3Q9BW30 176 aa4.31□□□□□ -1.72
ATPAF1-210ENST00000532925 KLK15Q9H2R5 256 aa4.31□□□□□ -1.72
ATPAF1-210ENST00000532925 SCRT2Q9NQ03 307 aa4.31□□□□□ -1.72
ATPAF1-210ENST00000532925 LINC00527Q9UJ94 153 aa4.31□□□□□ -1.72
ATPAF1-210ENST00000532925 MAST4O15021 2626 aa4.31□□□□□ -1.72
ATPAF1-210ENST00000532925 TMSB15BA0A087X1C1 80 aa4.3□□□□□ -1.72
ATPAF1-210ENST00000532925 A0A096LNJ9 63 aa4.3□□□□□ -1.72
ATPAF1-210ENST00000532925 IGHV3-66A0A0C4DH42 116 aa4.3□□□□□ -1.72
ATPAF1-210ENST00000532925 ZNF207O43670 478 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-210ENST00000532925 NPYP01303 97 aa4.3□□□□□ -1.72
ATPAF1-210ENST00000532925 TSPOP30536 169 aa4.3□□□□□ -1.72
ATPAF1-210ENST00000532925 IFI27P40305 119 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-210ENST00000532925 ASIPP42127 132 aa4.3□□□□□ -1.72
ATPAF1-210ENST00000532925 KRTAP10-9P60411 292 aa4.3□□□□□ -1.72
ATPAF1-210ENST00000532925 Q5PR19 223 aa4.3□□□□□ -1.72
ATPAF1-210ENST00000532925 COL5A1-AS1Q5SY13 56 aa4.3□□□□□ -1.72
ATPAF1-210ENST00000532925 IGFL4Q6B9Z1 124 aa4.3□□□□□ -1.72
ATPAF1-210ENST00000532925 POM121L12Q8N7R1 296 aa4.3□□□□□ -1.72
ATPAF1-210ENST00000532925 LINC00469Q8N7U9 141 aa4.3□□□□□ -1.72
ATPAF1-210ENST00000532925 Q8N8P6 123 aa4.3□□□□□ -1.72
ATPAF1-210ENST00000532925 OR1N2Q8NGR9 330 aa4.3□□□□□ -1.72
ATPAF1-210ENST00000532925 ZNF702PQ9H963 129 aa4.3□□□□□ -1.72
ATPAF1-210ENST00000532925 C11orf21Q9P2W6 132 aa4.3□□□□□ -1.72
ATPAF1-210ENST00000532925 ANKRD17O75179 2603 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-210ENST00000532925 ZFHX3Q15911 3703 aa4.3□□□□□ -1.72
ATPAF1-210ENST00000532925 COL12A1Q99715 3063 aa4.3□□□□□ -1.72
ATPAF1-210ENST00000532925 VPS13CQ709C8 3753 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 FASNP49327 2511 aaKnown RBP4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 FAM208BQ5VWN6 2430 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 IGLV2-18A0A075B6J9 118 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 IGHV3OR16-13A0A075B7E8 117 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 IGHV3-74A0A0B4J1X5 117 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 A8MTW9 85 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 K7EQG2 157 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 M0QZ24 198 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 ATP5LO75964 103 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 DUSP14O95147 198 aaKnown RBP4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 TNFRSF6BO95407 300 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 IGHV3-11P01762 117 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 CSN3P07498 182 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 HLA-DRB4P13762 266 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 IGLL1P15814 213 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 G0S2P27469 103 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 FCER1GP30273 86 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 LEPP41159 167 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 SNRPD3P62318 126 aaKnown RBP4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 SPANXN1Q5VSR9 72 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms