RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 LINC01559Q495D7 138 aa16.12■□□□□ 0.17
PACSIN3-209ENST00000532457 TRPT1Q86TN4 253 aaKnown RBP16.12■□□□□ 0.17
PACSIN3-209ENST00000532457 GRIFINA4D1Z8 144 aa16.12■□□□□ 0.17
PACSIN3-209ENST00000532457 HIGD1CA8MV81 97 aa16.12■□□□□ 0.17
PACSIN3-209ENST00000532457 DEFB125Q8N687 156 aa16.12■□□□□ 0.17
PACSIN3-209ENST00000532457 FAM210BQ96KR6 192 aa16.12■□□□□ 0.17
PACSIN3-209ENST00000532457 TRAV21A0A0B4J279 112 aa16.11■□□□□ 0.17
PACSIN3-209ENST00000532457 C7orf71A4D174 169 aa16.11■□□□□ 0.17
PACSIN3-209ENST00000532457 STHQ8IWL8 128 aa16.11■□□□□ 0.17
PACSIN3-209ENST00000532457 CLUHP3Q96NS8 147 aa16.11■□□□□ 0.17
PACSIN3-209ENST00000532457 RBMY1A1P0DJD3 496 aaKnown RBP16.1■□□□□ 0.17
PACSIN3-209ENST00000532457 RBMY1CP0DJD4 496 aa16.1■□□□□ 0.17
PACSIN3-209ENST00000532457 RBMY1FQ15415 496 aaKnown RBP16.1■□□□□ 0.17
PACSIN3-209ENST00000532457 MUC21Q5SSG8 566 aa16.1■□□□□ 0.17
PACSIN3-209ENST00000532457 PGLYRP4Q96LB8 373 aa16.1■□□□□ 0.17
PACSIN3-209ENST00000532457 TSPOP30536 169 aa16.1■□□□□ 0.17
PACSIN3-209ENST00000532457 FOXA3P55318 350 aaPredicted RBP16.1■□□□□ 0.17
PACSIN3-209ENST00000532457 KRTAP10-11P60412 298 aa16.1■□□□□ 0.17
PACSIN3-209ENST00000532457 GFRA4Q9GZZ7 299 aa16.1■□□□□ 0.17
PACSIN3-209ENST00000532457 NAT8BQ9UHF3 227 aa16.1■□□□□ 0.17
PACSIN3-209ENST00000532457 ANXA2RQ3ZCQ2 193 aa16.09■□□□□ 0.17
PACSIN3-209ENST00000532457 GTSCR1Q86UQ5 136 aa16.09■□□□□ 0.17
PACSIN3-209ENST00000532457 Q8N1Y9 231 aa16.09■□□□□ 0.17
PACSIN3-209ENST00000532457 NAGKQ9UJ70 344 aa16.09■□□□□ 0.17
PACSIN3-209ENST00000532457 FAM231BA6NCW3 169 aa16.08■□□□□ 0.16
PACSIN3-209ENST00000532457 C1orf196B1AJZ1 125 aa16.08■□□□□ 0.16
PACSIN3-209ENST00000532457 GNRH2O43555 120 aa16.08■□□□□ 0.16
PACSIN3-209ENST00000532457 BTF3L4Q96K17 158 aa16.08■□□□□ 0.16
PACSIN3-209ENST00000532457 GIG44P09565 113 aaPredicted RBP16.07■□□□□ 0.16
PACSIN3-209ENST00000532457 DNAH3Q8TD57 4116 aa16.06■□□□□ 0.16
PACSIN3-209ENST00000532457 TRAV9-1A0A075B6T8 112 aa16.06■□□□□ 0.16
PACSIN3-209ENST00000532457 TYMSP04818 313 aa16.06■□□□□ 0.16
PACSIN3-209ENST00000532457 IGLC6P0CF74 106 aa16.06■□□□□ 0.16
PACSIN3-209ENST00000532457 RAB5BP61020 215 aa16.06■□□□□ 0.16
PACSIN3-209ENST00000532457 MRPL54Q6P161 138 aaKnown RBP16.06■□□□□ 0.16
PACSIN3-209ENST00000532457 MUC21A0A0G2JKD1 596 aa16.05■□□□□ 0.16
PACSIN3-209ENST00000532457 MUC21A0A140T8X8 626 aa16.05■□□□□ 0.16
PACSIN3-209ENST00000532457 RPL35AP18077 110 aaKnown RBP16.05■□□□□ 0.16
PACSIN3-209ENST00000532457 RPS20P60866 119 aaKnown RBP16.05■□□□□ 0.16
PACSIN3-209ENST00000532457 LYZL1Q6UWQ5 148 aa16.05■□□□□ 0.16
PACSIN3-209ENST00000532457 XCL2Q9UBD3 114 aa16.05■□□□□ 0.16
PACSIN3-209ENST00000532457 RPS10P46783 165 aaKnown RBP16.05■□□□□ 0.16
PACSIN3-209ENST00000532457 TPPP3Q9BW30 176 aa16.05■□□□□ 0.16
PACSIN3-209ENST00000532457 TP53TG3Q9ULZ0 132 aa16.05■□□□□ 0.16
PACSIN3-209ENST00000532457 PRM2P04554 102 aa16.04■□□□□ 0.16
PACSIN3-209ENST00000532457 XKRY2A2RUG3 117 aa16.03■□□□□ 0.16
PACSIN3-209ENST00000532457 SPRY2O43597 315 aa16.03■□□□□ 0.16
PACSIN3-209ENST00000532457 ARMS2P0C7Q2 107 aa16.03■□□□□ 0.16
PACSIN3-209ENST00000532457 SSTP61278 116 aa16.03■□□□□ 0.16
PACSIN3-209ENST00000532457 ZFP82Q8N141 532 aa16.03■□□□□ 0.16
PACSIN3-209ENST00000532457 SRD5A3Q9H8P0 318 aa16.03■□□□□ 0.16
PACSIN3-209ENST00000532457 FER1L6-AS1Q8NA97 138 aa16.02■□□□□ 0.16
PACSIN3-209ENST00000532457 A0A1B0GXF2 115 aa16.01■□□□□ 0.15
PACSIN3-209ENST00000532457 TDRG1Q3Y452 100 aa16.01■□□□□ 0.15
PACSIN3-209ENST00000532457 FAM159AQ6UWV7 190 aa16.01■□□□□ 0.15
PACSIN3-209ENST00000532457 PHOX2AO14813 284 aa16■□□□□ 0.15
PACSIN3-209ENST00000532457 TRGC2P03986 189 aa16■□□□□ 0.15
PACSIN3-209ENST00000532457 C1orf158Q8N1D5 194 aa16■□□□□ 0.15
PACSIN3-209ENST00000532457 SSBP4Q9BWG4 385 aaPredicted RBP16■□□□□ 0.15
PACSIN3-209ENST00000532457 IGHV1OR15-1A0A075B7D0 117 aa15.99■□□□□ 0.15
PACSIN3-209ENST00000532457 RNASE3P12724 160 aaKnown RBP15.99■□□□□ 0.15
PACSIN3-209ENST00000532457 CTRLP40313 264 aa15.99■□□□□ 0.15
PACSIN3-209ENST00000532457 TMEM136Q6ZRR5 245 aa15.99■□□□□ 0.15
PACSIN3-209ENST00000532457 A0A1B0GUT8 65 aa15.98■□□□□ 0.15
PACSIN3-209ENST00000532457 CAMPP49913 170 aa15.98■□□□□ 0.15
PACSIN3-209ENST00000532457 MSRB1Q9NZV6 116 aa15.98■□□□□ 0.15
PACSIN3-209ENST00000532457 MDFICQ9P1T7 246 aa15.98■□□□□ 0.15
PACSIN3-209ENST00000532457 H3BVH4 76 aa15.98■□□□□ 0.15
PACSIN3-209ENST00000532457 PRB2P02812 416 aaPredicted RBP15.98■□□□□ 0.15
PACSIN3-209ENST00000532457 NUTF2P61970 127 aaKnown RBP15.98■□□□□ 0.15
PACSIN3-209ENST00000532457 DNLZQ5SXM8 178 aa15.98■□□□□ 0.15
PACSIN3-209ENST00000532457 TIMM8BQ9Y5J9 83 aaPredicted RBP15.98■□□□□ 0.15
PACSIN3-209ENST00000532457 OR10AG1Q8NH19 301 aa15.97■□□□□ 0.15
PACSIN3-209ENST00000532457 MEGF8Q7Z7M0 2845 aa15.97■□□□□ 0.15
PACSIN3-209ENST00000532457 SNAI2O43623 268 aa15.96■□□□□ 0.15
PACSIN3-209ENST00000532457 INSP01308 110 aa15.96■□□□□ 0.15
PACSIN3-209ENST00000532457 AMBPP02760 352 aa15.96■□□□□ 0.15
PACSIN3-209ENST00000532457 HTN1P15515 57 aa15.96■□□□□ 0.15
PACSIN3-209ENST00000532457 NTF3P20783 257 aa15.96■□□□□ 0.15
PACSIN3-209ENST00000532457 ATP5L2Q7Z4Y8 100 aa15.96■□□□□ 0.15
PACSIN3-209ENST00000532457 CSNK1G2-AS1Q8NCQ2 148 aa15.96■□□□□ 0.15
PACSIN3-209ENST00000532457 KCNS1Q96KK3 526 aa15.96■□□□□ 0.15
PACSIN3-209ENST00000532457 IGHV3-16A0A0C4DH30 117 aa15.96■□□□□ 0.14
PACSIN3-209ENST00000532457 ASIPP42127 132 aa15.96■□□□□ 0.14
PACSIN3-209ENST00000532457 DEFA6Q01524 100 aa15.96■□□□□ 0.14
PACSIN3-209ENST00000532457 FABP9Q0Z7S8 132 aa15.96■□□□□ 0.14
PACSIN3-209ENST00000532457 LINC01587Q99440 93 aa15.96■□□□□ 0.14
PACSIN3-209ENST00000532457 GNB1LQ9BYB4 327 aa15.96■□□□□ 0.14
PACSIN3-209ENST00000532457 CNFNQ9BYD5 112 aa15.96■□□□□ 0.14
PACSIN3-209ENST00000532457 SCRT2Q9NQ03 307 aa15.96■□□□□ 0.14
PACSIN3-209ENST00000532457 MUC4Q99102 2169 aa15.95■□□□□ 0.14
PACSIN3-209ENST00000532457 F2Z2F3 143 aa15.95■□□□□ 0.14
PACSIN3-209ENST00000532457 OR5AL1P0C617 328 aa15.95■□□□□ 0.14
PACSIN3-209ENST00000532457 HBBP68871 147 aa15.95■□□□□ 0.14
PACSIN3-209ENST00000532457 TRAPPC1Q9Y5R8 145 aa15.95■□□□□ 0.14
PACSIN3-209ENST00000532457 SNURFLB1AK76 121 aa15.94■□□□□ 0.14
PACSIN3-209ENST00000532457 RAB4BP61018 213 aa15.94■□□□□ 0.14
PACSIN3-209ENST00000532457 RIGQ13278 110 aa15.94■□□□□ 0.14
PACSIN3-209ENST00000532457 S100A4P26447 101 aaKnown RBP15.94■□□□□ 0.14
PACSIN3-209ENST00000532457 MORN3Q6PF18 240 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms