RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 CEP19Q96LK0 163 aa-0.79□□□□□ -2.54
ATM-217ENST00000531957 Q96NJ1 140 aa-0.79□□□□□ -2.54
ATM-217ENST00000531957 SH3BGRL3Q9H299 93 aa-0.79□□□□□ -2.54
ATM-217ENST00000531957 MUC17Q685J3 4493 aa-0.79□□□□□ -2.54
ATM-217ENST00000531957 PKHD1L1Q86WI1 4243 aa-0.79□□□□□ -2.54
ATM-217ENST00000531957 ANK1P16157 1881 aa-0.8□□□□□ -2.54
ATM-217ENST00000531957 FGD6Q6ZV73 1430 aa-0.8□□□□□ -2.54
ATM-217ENST00000531957 SPTBN2O15020 2390 aa-0.8□□□□□ -2.54
ATM-217ENST00000531957 BCL2P10415 239 aa-0.8□□□□□ -2.54
ATM-217ENST00000531957 BORCS8Q96FH0 119 aa-0.8□□□□□ -2.54
ATM-217ENST00000531957 PARVGQ9HBI0 331 aa-0.8□□□□□ -2.54
ATM-217ENST00000531957 HECTD1Q9ULT8 2610 aa-0.8□□□□□ -2.54
ATM-217ENST00000531957 SOGA1O94964 1423 aa-0.81□□□□□ -2.54
ATM-217ENST00000531957 DOPEY1Q5JWR5 2465 aa-0.81□□□□□ -2.54
ATM-217ENST00000531957 A0A0G2JMM0 328 aa-0.81□□□□□ -2.54
ATM-217ENST00000531957 TMEM189A5PLL7 270 aa-0.81□□□□□ -2.54
ATM-217ENST00000531957 C9JAW5 83 aa-0.81□□□□□ -2.54
ATM-217ENST00000531957 ERVS71-1P61550 626 aa-0.81□□□□□ -2.54
ATM-217ENST00000531957 ARF6P62330 175 aa-0.81□□□□□ -2.54
ATM-217ENST00000531957 REEP5Q00765 189 aa-0.81□□□□□ -2.54
ATM-217ENST00000531957 DEFB109BQ30KR1 87 aa-0.81□□□□□ -2.54
ATM-217ENST00000531957 CCSMST1Q4G0I0 132 aa-0.81□□□□□ -2.54
ATM-217ENST00000531957 NUP35Q8NFH5 326 aa-0.81□□□□□ -2.54
ATM-217ENST00000531957 DIRC1Q969H9 104 aa-0.81□□□□□ -2.54
ATM-217ENST00000531957 ATG5Q9H1Y0 275 aa-0.81□□□□□ -2.54
ATM-217ENST00000531957 TAF9BQ9HBM6 251 aa-0.81□□□□□ -2.54
ATM-217ENST00000531957 SS18L2Q9UHA2 77 aa-0.81□□□□□ -2.54
ATM-217ENST00000531957 AKAP9Q99996 3911 aa-0.82□□□□□ -2.54
ATM-217ENST00000531957 NHSL1Q5SYE7 1610 aa-0.82□□□□□ -2.54
ATM-217ENST00000531957 PCF11O94913 1555 aaKnown RBP-0.82□□□□□ -2.54
ATM-217ENST00000531957 EDF1O60869 148 aaKnown RBP-0.82□□□□□ -2.54
ATM-217ENST00000531957 CCKP06307 115 aa-0.82□□□□□ -2.54
ATM-217ENST00000531957 GLRXP35754 106 aa-0.82□□□□□ -2.54
ATM-217ENST00000531957 RHOHQ15669 191 aa-0.82□□□□□ -2.54
ATM-217ENST00000531957 Q5VSD8 79 aa-0.82□□□□□ -2.54
ATM-217ENST00000531957 OR13C6PQ8NH95 151 aa-0.82□□□□□ -2.54
ATM-217ENST00000531957 C19orf12Q9NSK7 152 aa-0.82□□□□□ -2.54
ATM-217ENST00000531957 COA4Q9NYJ1 87 aa-0.82□□□□□ -2.54
ATM-217ENST00000531957 IL20Q9NYY1 176 aa-0.82□□□□□ -2.54
ATM-217ENST00000531957 MPC1Q9Y5U8 109 aa-0.82□□□□□ -2.54
ATM-217ENST00000531957 USP9YO00507 2555 aaPredicted RBP-0.82□□□□□ -2.54
ATM-217ENST00000531957 PIK3C2AO00443 1686 aa-0.82□□□□□ -2.54
ATM-217ENST00000531957 TNRC18O15417 2968 aaPredicted RBP-0.83□□□□□ -2.54
ATM-217ENST00000531957 VPS13DQ5THJ4 4388 aa-0.83□□□□□ -2.54
ATM-217ENST00000531957 PKD1P98161 4303 aa-0.83□□□□□ -2.54
ATM-217ENST00000531957 PKDREJQ9NTG1 2253 aa-0.83□□□□□ -2.54
ATM-217ENST00000531957 CDC42EP2O14613 210 aa-0.83□□□□□ -2.54
ATM-217ENST00000531957 SAA1P0DJI8 122 aaPredicted RBP-0.83□□□□□ -2.54
ATM-217ENST00000531957 SDC4P31431 198 aa-0.83□□□□□ -2.54
ATM-217ENST00000531957 GTF2A1P52655 376 aaPredicted RBP-0.83□□□□□ -2.54
ATM-217ENST00000531957 MAXP61244 160 aa-0.83□□□□□ -2.54
ATM-217ENST00000531957 WFDC2Q14508 124 aa-0.83□□□□□ -2.54
ATM-217ENST00000531957 TMED2Q15363 201 aa-0.83□□□□□ -2.54
ATM-217ENST00000531957 PPP1R1CQ8WVI7 109 aa-0.83□□□□□ -2.54
ATM-217ENST00000531957 PRELID3AQ96N28 172 aa-0.83□□□□□ -2.54
ATM-217ENST00000531957 SMIM7Q9BQ49 75 aa-0.83□□□□□ -2.54
ATM-217ENST00000531957 CYP4F30PQ9H0H9 118 aa-0.83□□□□□ -2.54
ATM-217ENST00000531957 OTORQ9NRC9 128 aa-0.83□□□□□ -2.54
ATM-217ENST00000531957 FKBP11Q9NYL4 201 aa-0.83□□□□□ -2.54
ATM-217ENST00000531957 MED11Q9P086 117 aa-0.83□□□□□ -2.54
ATM-217ENST00000531957 LAMTOR3Q9UHA4 124 aa-0.83□□□□□ -2.54
ATM-217ENST00000531957 KIAA1549LQ6ZVL6 1849 aa-0.83□□□□□ -2.54
ATM-217ENST00000531957 RYR2Q92736 4967 aa-0.84□□□□□ -2.54
ATM-217ENST00000531957 FAT3Q8TDW7 4589 aa-0.84□□□□□ -2.54
ATM-217ENST00000531957 EPG5Q9HCE0 2579 aa-0.84□□□□□ -2.54
ATM-217ENST00000531957 CNOT1A5YKK6 2376 aaKnown RBP-0.84□□□□□ -2.54
ATM-217ENST00000531957 LOC107986453A0A1B0GWG9 222 aa-0.84□□□□□ -2.54
ATM-217ENST00000531957 NMBP08949 121 aa-0.84□□□□□ -2.54
ATM-217ENST00000531957 MRPS25P82663 173 aaKnown RBP-0.84□□□□□ -2.54
ATM-217ENST00000531957 SPAG11BQ08648 103 aa-0.84□□□□□ -2.54
ATM-217ENST00000531957 KLK9Q2XQG4 91 aa-0.84□□□□□ -2.54
ATM-217ENST00000531957 UNQ5815/PRO19632Q6UWF5 114 aa-0.84□□□□□ -2.54
ATM-217ENST00000531957 TMEM141Q96I45 108 aa-0.84□□□□□ -2.54
ATM-217ENST00000531957 BPESC1Q9GZL8 116 aa-0.84□□□□□ -2.54
ATM-217ENST00000531957 PRRC2CQ9Y520 2896 aaKnown RBP-0.84□□□□□ -2.54
ATM-217ENST00000531957 CDK13Q14004 1512 aaKnown RBP-0.84□□□□□ -2.54
ATM-217ENST00000531957 BIVM-ERCC5R4GMW8 1640 aa-0.85□□□□□ -2.55
ATM-217ENST00000531957 CUBNO60494 3623 aa-0.85□□□□□ -2.55
ATM-217ENST00000531957 F5P12259 2224 aa-0.85□□□□□ -2.55
ATM-217ENST00000531957 IFITM5A6NNB3 132 aa-0.85□□□□□ -2.55
ATM-217ENST00000531957 H7BYZ3 331 aa-0.85□□□□□ -2.55
ATM-217ENST00000531957 IFNA6P05013 189 aa-0.85□□□□□ -2.55
ATM-217ENST00000531957 CSN2P05814 226 aa-0.85□□□□□ -2.55
ATM-217ENST00000531957 CTXN2P0C2S0 81 aa-0.85□□□□□ -2.55
ATM-217ENST00000531957 ATRQ13535 2644 aa-0.85□□□□□ -2.55
ATM-217ENST00000531957 DNAH2Q9P225 4427 aa-0.85□□□□□ -2.55
ATM-217ENST00000531957 ANK3Q12955 4377 aaKnown RBP-0.85□□□□□ -2.55
ATM-217ENST00000531957 SONP18583 2426 aaKnown RBP-0.85□□□□□ -2.55
ATM-217ENST00000531957 PPRC1Q5VV67 1664 aaKnown RBP-0.85□□□□□ -2.55
ATM-217ENST00000531957 CPDO75976 1380 aa-0.85□□□□□ -2.55
ATM-217ENST00000531957 LAMC1P11047 1609 aa-0.86□□□□□ -2.55
ATM-217ENST00000531957 A0A087WTM6 91 aa-0.86□□□□□ -2.55
ATM-217ENST00000531957 SPRR1AP35321 89 aa-0.86□□□□□ -2.55
ATM-217ENST00000531957 LTC4SQ16873 150 aa-0.86□□□□□ -2.55
ATM-217ENST00000531957 AP3S1Q92572 193 aa-0.86□□□□□ -2.55
ATM-217ENST00000531957 GINS3Q9BRX5 216 aa-0.86□□□□□ -2.55
ATM-217ENST00000531957 CSPG4Q6UVK1 2322 aa-0.86□□□□□ -2.55
ATM-217ENST00000531957 LAMB1P07942 1786 aa-0.86□□□□□ -2.55
ATM-217ENST00000531957 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.86□□□□□ -2.55
ATM-217ENST00000531957 CDK12Q9NYV4 1490 aaPredicted RBP-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms