RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 FAM229AH3BQW9 127 aa12.34□□□□□ -0.43
SSSCA1-206ENST00000531405 TMED6Q8WW62 240 aa12.34□□□□□ -0.43
SSSCA1-206ENST00000531405 TVP23CQ96ET8 276 aa12.34□□□□□ -0.43
SSSCA1-206ENST00000531405 Q9HAA7 133 aa12.34□□□□□ -0.43
SSSCA1-206ENST00000531405 TRAV8-1A0A0A6YYK1 113 aa12.33□□□□□ -0.44
SSSCA1-206ENST00000531405 A6NHS1 94 aa12.33□□□□□ -0.44
SSSCA1-206ENST00000531405 GATA1P15976 413 aaPredicted RBP12.33□□□□□ -0.44
SSSCA1-206ENST00000531405 ASAH1Q13510 395 aa12.33□□□□□ -0.44
SSSCA1-206ENST00000531405 GOLT1AQ6ZVE7 132 aa12.33□□□□□ -0.44
SSSCA1-206ENST00000531405 CMTM2Q8TAZ6 248 aa12.33□□□□□ -0.44
SSSCA1-206ENST00000531405 SMIM3Q9BZL3 60 aa12.33□□□□□ -0.44
SSSCA1-206ENST00000531405 OTORQ9NRC9 128 aa12.33□□□□□ -0.44
SSSCA1-206ENST00000531405 TRAV21A0A0B4J279 112 aa12.32□□□□□ -0.44
SSSCA1-206ENST00000531405 TAS2R45P59539 299 aa12.32□□□□□ -0.44
SSSCA1-206ENST00000531405 LINC01556Q5JQF7 62 aa12.32□□□□□ -0.44
SSSCA1-206ENST00000531405 Q6ZSN1 163 aa12.32□□□□□ -0.44
SSSCA1-206ENST00000531405 SH2D6Q7Z4S9 175 aa12.32□□□□□ -0.44
SSSCA1-206ENST00000531405 TMEM70Q9BUB7 260 aa12.32□□□□□ -0.44
SSSCA1-206ENST00000531405 MBD2Q9UBB5 411 aa12.32□□□□□ -0.44
SSSCA1-206ENST00000531405 IBA57-AS1B1ANH7 110 aa12.31□□□□□ -0.44
SSSCA1-206ENST00000531405 H2BFSP57053 126 aa12.31□□□□□ -0.44
SSSCA1-206ENST00000531405 TIRAPP58753 221 aa12.31□□□□□ -0.44
SSSCA1-206ENST00000531405 GNG5P63218 68 aa12.31□□□□□ -0.44
SSSCA1-206ENST00000531405 Q8N814 137 aa12.31□□□□□ -0.44
SSSCA1-206ENST00000531405 SLC25A29Q8N8R3 303 aa12.31□□□□□ -0.44
SSSCA1-206ENST00000531405 ENKURQ8TC29 256 aa12.31□□□□□ -0.44
SSSCA1-206ENST00000531405 NTN5Q8WTR8 489 aaPredicted RBP12.31□□□□□ -0.44
SSSCA1-206ENST00000531405 PPP1R1CQ8WVI7 109 aa12.31□□□□□ -0.44
SSSCA1-206ENST00000531405 SDF2L1Q9HCN8 221 aa12.31□□□□□ -0.44
SSSCA1-206ENST00000531405 TREM1Q9NP99 234 aa12.31□□□□□ -0.44
SSSCA1-206ENST00000531405 FAM30AQ9NZY2 134 aa12.31□□□□□ -0.44
SSSCA1-206ENST00000531405 NDUFA13Q9P0J0 144 aa12.31□□□□□ -0.44
SSSCA1-206ENST00000531405 HSPB11Q9Y547 144 aa12.31□□□□□ -0.44
SSSCA1-206ENST00000531405 FBLL1A6NHQ2 334 aaKnown RBP12.3□□□□□ -0.44
SSSCA1-206ENST00000531405 IGHV3-30P01768 117 aa12.3□□□□□ -0.44
SSSCA1-206ENST00000531405 IGHV3-33P01772 117 aa12.3□□□□□ -0.44
SSSCA1-206ENST00000531405 IGHV3-30-3P0DP02 117 aa12.3□□□□□ -0.44
SSSCA1-206ENST00000531405 IGHV3-30-5P0DP03 117 aa12.3□□□□□ -0.44
SSSCA1-206ENST00000531405 OR10J3Q5JRS4 329 aa12.3□□□□□ -0.44
SSSCA1-206ENST00000531405 SGK494Q96LW2 274 aa12.3□□□□□ -0.44
SSSCA1-206ENST00000531405 IGHV3-73A0A0B4J1V6 119 aa12.29□□□□□ -0.44
SSSCA1-206ENST00000531405 TRAV8-6A0A0B4J262 113 aa12.29□□□□□ -0.44
SSSCA1-206ENST00000531405 CYCSP99999 105 aaKnown RBP12.29□□□□□ -0.44
SSSCA1-206ENST00000531405 FAM74A1Q5RGS3 127 aa12.29□□□□□ -0.44
SSSCA1-206ENST00000531405 DPPA3Q6W0C5 159 aa12.29□□□□□ -0.44
SSSCA1-206ENST00000531405 SCGB1C1Q8TD33 95 aa12.29□□□□□ -0.44
SSSCA1-206ENST00000531405 ASB13Q8WXK3 278 aa12.29□□□□□ -0.44
SSSCA1-206ENST00000531405 HMGB3O15347 200 aaKnown RBP12.28□□□□□ -0.44
SSSCA1-206ENST00000531405 PFN1P07737 140 aaKnown RBP12.28□□□□□ -0.44
SSSCA1-206ENST00000531405 ZNF876PQ49A33 203 aa12.28□□□□□ -0.44
SSSCA1-206ENST00000531405 CFAP126Q5VTH2 177 aa12.28□□□□□ -0.44
SSSCA1-206ENST00000531405 KCNS1Q96KK3 526 aa12.28□□□□□ -0.44
SSSCA1-206ENST00000531405 MPC2O95563 127 aa12.27□□□□□ -0.45
SSSCA1-206ENST00000531405 RAB2AP61019 212 aa12.27□□□□□ -0.45
SSSCA1-206ENST00000531405 WFDC1Q9HC57 220 aa12.27□□□□□ -0.45
SSSCA1-206ENST00000531405 C11orf21Q9P2W6 132 aa12.27□□□□□ -0.45
SSSCA1-206ENST00000531405 RS1O15537 224 aa12.26□□□□□ -0.45
SSSCA1-206ENST00000531405 RPL12P30050 165 aaKnown RBP12.26□□□□□ -0.45
SSSCA1-206ENST00000531405 ZNF80P51504 273 aaPredicted RBP12.26□□□□□ -0.45
SSSCA1-206ENST00000531405 WFDC2Q14508 124 aa12.26□□□□□ -0.45
SSSCA1-206ENST00000531405 RHOHQ15669 191 aa12.26□□□□□ -0.45
SSSCA1-206ENST00000531405 Q8N3U1 123 aa12.26□□□□□ -0.45
SSSCA1-206ENST00000531405 PRADC1Q9BSG0 188 aa12.26□□□□□ -0.45
SSSCA1-206ENST00000531405 A0A1W2PPV4 95 aa12.25□□□□□ -0.45
SSSCA1-206ENST00000531405 INMT-MINDY4F8WBC2 141 aa12.25□□□□□ -0.45
SSSCA1-206ENST00000531405 ACOT6Q3I5F7 207 aaPredicted RBP12.25□□□□□ -0.45
SSSCA1-206ENST00000531405 LELP1Q5T871 98 aa12.25□□□□□ -0.45
SSSCA1-206ENST00000531405 PQLC2Q6ZP29 291 aa12.25□□□□□ -0.45
SSSCA1-206ENST00000531405 TMEM75Q8N9X5 138 aa12.25□□□□□ -0.45
SSSCA1-206ENST00000531405 TRBV6-4A0A1B0GX49 114 aa12.24□□□□□ -0.45
SSSCA1-206ENST00000531405 UPK1BO75841 260 aa12.24□□□□□ -0.45
SSSCA1-206ENST00000531405 IFITM3Q01628 133 aa12.24□□□□□ -0.45
SSSCA1-206ENST00000531405 ARL6IP6Q8N6S5 226 aa12.24□□□□□ -0.45
SSSCA1-206ENST00000531405 S100ZQ8WXG8 99 aa12.24□□□□□ -0.45
SSSCA1-206ENST00000531405 PGPEP1LA6NFU8 196 aa12.23□□□□□ -0.45
SSSCA1-206ENST00000531405 J3QL48 77 aa12.23□□□□□ -0.45
SSSCA1-206ENST00000531405 PET100P0DJ07 73 aa12.23□□□□□ -0.45
SSSCA1-206ENST00000531405 ARL14EPLP0DKL9 152 aa12.23□□□□□ -0.45
SSSCA1-206ENST00000531405 ZNF506Q5JVG8 444 aa12.23□□□□□ -0.45
SSSCA1-206ENST00000531405 ATP6V0E2Q8NHE4 81 aa12.23□□□□□ -0.45
SSSCA1-206ENST00000531405 C9orf85Q96MD7 179 aa12.23□□□□□ -0.45
SSSCA1-206ENST00000531405 NDFIP1Q9BT67 221 aa12.23□□□□□ -0.45
SSSCA1-206ENST00000531405 GTSF1LQ9H1H1 148 aa12.23□□□□□ -0.45
SSSCA1-206ENST00000531405 LECT2O14960 151 aa12.22□□□□□ -0.45
SSSCA1-206ENST00000531405 SSNA1O43805 119 aa12.22□□□□□ -0.45
SSSCA1-206ENST00000531405 OR10G9Q8NGN4 311 aa12.22□□□□□ -0.45
SSSCA1-206ENST00000531405 OR10G7Q8NGN6 311 aa12.22□□□□□ -0.45
SSSCA1-206ENST00000531405 GCGP01275 180 aa12.21□□□□□ -0.45
SSSCA1-206ENST00000531405 LAGE3Q14657 143 aa12.21□□□□□ -0.45
SSSCA1-206ENST00000531405 LINC00299Q6ZSB3 139 aa12.21□□□□□ -0.45
SSSCA1-206ENST00000531405 BOLA1Q9Y3E2 137 aa12.21□□□□□ -0.45
SSSCA1-206ENST00000531405 TAAR5O14804 337 aa12.2□□□□□ -0.46
SSSCA1-206ENST00000531405 CIDEAO60543 219 aa12.2□□□□□ -0.46
SSSCA1-206ENST00000531405 TCRAP04437 139 aa12.2□□□□□ -0.46
SSSCA1-206ENST00000531405 RNASE3P12724 160 aaKnown RBP12.2□□□□□ -0.46
SSSCA1-206ENST00000531405 MARVELD1Q9BSK0 173 aa12.2□□□□□ -0.46
SSSCA1-206ENST00000531405 PSG8Q9UQ74 426 aa12.2□□□□□ -0.46
SSSCA1-206ENST00000531405 IGLV2-11P01706 119 aa12.19□□□□□ -0.46
SSSCA1-206ENST00000531405 C1QBP02746 253 aa12.19□□□□□ -0.46
SSSCA1-206ENST00000531405 MGST1P10620 155 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms