RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 NAV3Q8IVL0 2385 aa5.99□□□□□ -1.45
PTPRK-219ENST00000531050 TINCRA0A1B0GVN0 87 aa5.98□□□□□ -1.45
PTPRK-219ENST00000531050 M0R3E3 92 aa5.98□□□□□ -1.45
PTPRK-219ENST00000531050 CNTFRP26992 372 aa5.98□□□□□ -1.45
PTPRK-219ENST00000531050 SUB1P53999 127 aaKnown RBP eCLIP5.98□□□□□ -1.45
PTPRK-219ENST00000531050 IMMP1LQ96LU5 166 aa5.98□□□□□ -1.45
PTPRK-219ENST00000531050 IGKV3D-15A0A087WSY6 115 aa5.98□□□□□ -1.45
PTPRK-219ENST00000531050 A0A0B4J2C4 111 aa5.98□□□□□ -1.45
PTPRK-219ENST00000531050 C17orf100A8MU93 164 aa5.98□□□□□ -1.45
PTPRK-219ENST00000531050 H3BT86 120 aa5.98□□□□□ -1.45
PTPRK-219ENST00000531050 EDN2P20800 178 aa5.98□□□□□ -1.45
PTPRK-219ENST00000531050 CD40P25942 277 aa5.98□□□□□ -1.45
PTPRK-219ENST00000531050 TSPEAR-AS2P59090 65 aa5.98□□□□□ -1.45
PTPRK-219ENST00000531050 SEC61GP60059 68 aa5.98□□□□□ -1.45
PTPRK-219ENST00000531050 PMS2CLQ68D20 193 aa5.98□□□□□ -1.45
PTPRK-219ENST00000531050 IL17RELQ6ZVW7 336 aa5.98□□□□□ -1.45
PTPRK-219ENST00000531050 C5orf38Q86SI9 138 aa5.98□□□□□ -1.45
PTPRK-219ENST00000531050 C14orf178Q8N769 122 aaPredicted RBP5.98□□□□□ -1.45
PTPRK-219ENST00000531050 ZNF256Q9Y2P7 627 aaPredicted RBP5.98□□□□□ -1.45
PTPRK-219ENST00000531050 TRIAP1O43715 76 aa5.97□□□□□ -1.45
PTPRK-219ENST00000531050 CGB3P0DN86 165 aa5.97□□□□□ -1.45
PTPRK-219ENST00000531050 CGB7P0DN87 165 aa5.97□□□□□ -1.45
PTPRK-219ENST00000531050 ZNF80P51504 273 aaPredicted RBP5.97□□□□□ -1.45
PTPRK-219ENST00000531050 HIST1H4AP62805 103 aaKnown RBP5.97□□□□□ -1.45
PTPRK-219ENST00000531050 IL11RAQ14626 422 aa5.97□□□□□ -1.45
PTPRK-219ENST00000531050 C17orf58Q2M2W7 97 aa5.97□□□□□ -1.45
PTPRK-219ENST00000531050 COX8CQ7Z4L0 72 aa5.97□□□□□ -1.45
PTPRK-219ENST00000531050 SCGB3A1Q96QR1 104 aa5.97□□□□□ -1.45
PTPRK-219ENST00000531050 AMELXQ99217 191 aa5.97□□□□□ -1.45
PTPRK-219ENST00000531050 IQCF6A8MYZ5 107 aa5.97□□□□□ -1.45
PTPRK-219ENST00000531050 RFPL3SP0C7P2 107 aa5.97□□□□□ -1.45
PTPRK-219ENST00000531050 LINC00643Q86TS7 51 aa5.97□□□□□ -1.45
PTPRK-219ENST00000531050 DOCK7Q96N67 2140 aa5.97□□□□□ -1.45
PTPRK-219ENST00000531050 KLK15Q9H2R5 256 aa5.97□□□□□ -1.45
PTPRK-219ENST00000531050 BEX4Q9NWD9 120 aaPredicted RBP5.97□□□□□ -1.45
PTPRK-219ENST00000531050 VPS13AQ96RL7 3174 aa5.97□□□□□ -1.45
PTPRK-219ENST00000531050 CFAP54Q96N23 3096 aa5.97□□□□□ -1.45
PTPRK-219ENST00000531050 PCNX2A6NKB5 2137 aa5.97□□□□□ -1.45
PTPRK-219ENST00000531050 TRAV26-2A0A0B4J265 109 aa5.96□□□□□ -1.45
PTPRK-219ENST00000531050 TRBV30A0A0K0K1B3 111 aa5.96□□□□□ -1.45
PTPRK-219ENST00000531050 CCL4P13236 92 aa5.96□□□□□ -1.45
PTPRK-219ENST00000531050 RPL35AP18077 110 aaKnown RBP5.96□□□□□ -1.45
PTPRK-219ENST00000531050 LYZP61626 148 aa5.96□□□□□ -1.45
PTPRK-219ENST00000531050 RNF152Q8N8N0 203 aa5.96□□□□□ -1.45
PTPRK-219ENST00000531050 TOMM6Q96B49 74 aa5.96□□□□□ -1.45
PTPRK-219ENST00000531050 DSCAML1Q8TD84 2053 aa5.96□□□□□ -1.45
PTPRK-219ENST00000531050 IGKV1D-17A0A075B6S4 117 aa5.96□□□□□ -1.46
PTPRK-219ENST00000531050 IGHV3-21A0A0B4J1V1 117 aa5.96□□□□□ -1.46
PTPRK-219ENST00000531050 NTN3O00634 580 aaPredicted RBP5.96□□□□□ -1.46
PTPRK-219ENST00000531050 TRGV3P03979 118 aa5.96□□□□□ -1.46
PTPRK-219ENST00000531050 ERCC8Q13216 396 aa5.96□□□□□ -1.46
PTPRK-219ENST00000531050 Q1RN00 199 aa5.96□□□□□ -1.46
PTPRK-219ENST00000531050 LINC00336Q6ZUF6 198 aa5.96□□□□□ -1.46
PTPRK-219ENST00000531050 UPK3BQ9BT76 320 aa5.96□□□□□ -1.46
PTPRK-219ENST00000531050 C1orf43Q9BWL3 253 aa5.96□□□□□ -1.46
PTPRK-219ENST00000531050 ZNRD1Q9P1U0 126 aa5.96□□□□□ -1.46
PTPRK-219ENST00000531050 FRYQ5TBA9 3013 aa5.96□□□□□ -1.46
PTPRK-219ENST00000531050 ACYP1P07311 99 aa5.95□□□□□ -1.46
PTPRK-219ENST00000531050 SDIM1Q6ZPB5 146 aa5.95□□□□□ -1.46
PTPRK-219ENST00000531050 LYPD1Q8N2G4 141 aa5.95□□□□□ -1.46
PTPRK-219ENST00000531050 EEF1AKMT3Q96AZ1 226 aa5.95□□□□□ -1.46
PTPRK-219ENST00000531050 TMEM223A0PJW6 202 aa5.95□□□□□ -1.46
PTPRK-219ENST00000531050 C11orf86A6NJI1 115 aa5.95□□□□□ -1.46
PTPRK-219ENST00000531050 CXCL5P42830 114 aa5.95□□□□□ -1.46
PTPRK-219ENST00000531050 PVRIGQ6DKI7 326 aa5.95□□□□□ -1.46
PTPRK-219ENST00000531050 TMEM167AQ8TBQ9 72 aa5.95□□□□□ -1.46
PTPRK-219ENST00000531050 CXXC4Q9H2H0 198 aa5.95□□□□□ -1.46
PTPRK-219ENST00000531050 IGLV4-69A0A075B6H9 119 aa5.94□□□□□ -1.46
PTPRK-219ENST00000531050 PATE3B3GLJ2 98 aa5.94□□□□□ -1.46
PTPRK-219ENST00000531050 LY6LH3BQJ8 138 aa5.94□□□□□ -1.46
PTPRK-219ENST00000531050 ATOX1O00244 68 aa5.94□□□□□ -1.46
PTPRK-219ENST00000531050 SPRY2O43597 315 aa5.94□□□□□ -1.46
PTPRK-219ENST00000531050 FOLR3P41439 243 aa5.94□□□□□ -1.46
PTPRK-219ENST00000531050 HCP5Q6MZN7 132 aa5.94□□□□□ -1.46
PTPRK-219ENST00000531050 MAFAQ8NHW3 353 aaPredicted RBP5.94□□□□□ -1.46
PTPRK-219ENST00000531050 SHANK2-AS3Q9BTD1 123 aa5.94□□□□□ -1.46
PTPRK-219ENST00000531050 COL27A1Q8IZC6 1860 aaPredicted RBP5.94□□□□□ -1.46
PTPRK-219ENST00000531050 IGKV2-40A0A087WW87 121 aaPredicted RBP5.94□□□□□ -1.46
PTPRK-219ENST00000531050 TRAV13-1A0A0B4J241 112 aa5.94□□□□□ -1.46
PTPRK-219ENST00000531050 RS1O15537 224 aa5.94□□□□□ -1.46
PTPRK-219ENST00000531050 IGKV2D-40P01614 121 aaPredicted RBP5.94□□□□□ -1.46
PTPRK-219ENST00000531050 NSUN5P1Q3KNT7 163 aa5.94□□□□□ -1.46
PTPRK-219ENST00000531050 MUSTN1Q8IVN3 82 aa5.94□□□□□ -1.46
PTPRK-219ENST00000531050 TMEM86BQ8N661 226 aa5.94□□□□□ -1.46
PTPRK-219ENST00000531050 ZNRF1Q8ND25 227 aa5.94□□□□□ -1.46
PTPRK-219ENST00000531050 SMIM2Q9BVW6 85 aa5.94□□□□□ -1.46
PTPRK-219ENST00000531050 SCNM1Q9BWG6 230 aa5.94□□□□□ -1.46
PTPRK-219ENST00000531050 PKIGQ9Y2B9 76 aa5.94□□□□□ -1.46
PTPRK-219ENST00000531050 DOCK10Q96BY6 2186 aa5.93□□□□□ -1.46
PTPRK-219ENST00000531050 TRBV7-1A0A0A6YYK4 115 aa5.93□□□□□ -1.46
PTPRK-219ENST00000531050 C8orf31Q8N9H6 132 aa5.93□□□□□ -1.46
PTPRK-219ENST00000531050 Q8TAT8 98 aa5.93□□□□□ -1.46
PTPRK-219ENST00000531050 AGPAT4-IT1Q9H0P7 198 aa5.93□□□□□ -1.46
PTPRK-219ENST00000531050 DPH3P1Q9H4G8 78 aa5.93□□□□□ -1.46
PTPRK-219ENST00000531050 PFN2P35080 140 aa5.93□□□□□ -1.46
PTPRK-219ENST00000531050 Q0VFX4 171 aa5.93□□□□□ -1.46
PTPRK-219ENST00000531050 H3BRN7 92 aa5.92□□□□□ -1.46
PTPRK-219ENST00000531050 J3QQQ9 107 aa5.92□□□□□ -1.46
PTPRK-219ENST00000531050 PLGLAQ15195 96 aa5.92□□□□□ -1.46
PTPRK-219ENST00000531050 ORMDL2Q53FV1 153 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms