RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 RBMY1FQ15415 496 aaKnown RBP6.21□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 C1orf158Q8N1D5 194 aa6.21□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 KCNS1Q96KK3 526 aa6.21□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 C20orf144Q9BQM9 153 aa6.21□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 TIMM8BQ9Y5J9 83 aaPredicted RBP6.21□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 V9GYV3 84 aa6.21□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 A0A087WWC5 75 aa6.2□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 IGKV3D-20A0A0C4DH25 116 aa6.2□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 A8MWL6 223 aa6.2□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 S100A4P26447 101 aaKnown RBP6.2□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 TCL1AP56279 114 aa6.2□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 LINC01559Q495D7 138 aa6.2□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 TMEM256Q8N2U0 113 aa6.2□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 PYGO2Q9BRQ0 406 aa6.2□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 TPPP3Q9BW30 176 aa6.2□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 IL36BQ9NZH7 164 aa6.2□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 SCO1O75880 301 aa6.19□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 PRM2P04554 102 aa6.19□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 S100PP25815 95 aa6.19□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 ASIPP42127 132 aa6.19□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 DEFB135Q30KP9 77 aa6.19□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 CT83Q5H943 113 aa6.19□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 CSNK1G2-AS1Q8NCQ2 148 aa6.19□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 TSKUQ8WUA8 353 aa6.19□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 RCHY1Q96PM5 261 aa6.19□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 TP53TG3Q9ULZ0 132 aa6.19□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 TRGV11A0A075B6L2 103 aa6.18□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 SPRY2O43597 315 aa6.18□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 TYMSP04818 313 aa6.18□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 FAM3BP58499 235 aaPredicted RBP6.18□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 SSTP61278 116 aa6.18□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 TDRG1Q3Y452 100 aa6.18□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 TMEM88Q6PEY1 159 aa6.18□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 KCNIP4Q6PIL6 250 aa6.18□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 Q6ZWC4 215 aa6.18□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 MRAPQ8TCY5 172 aa6.18□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 PGLYRP4Q96LB8 373 aa6.18□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 LINC00467Q9BRT7 94 aa6.18□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 SMCO4Q9NRQ5 59 aa6.18□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 TMEM242Q9NWH2 141 aa6.18□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 URGCP-MRPS24S4R325 110 aa6.18□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 IGHV3-16A0A0C4DH30 117 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 MUC21A0A0G2JKD1 596 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 MUC21A0A140T8X8 626 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 A0A1W2PPQ1 181 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 SMIM27A0A1W2PRY6 76 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 CXorf65A6NEN9 183 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 H3BVH4 76 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 SPINK4O60575 86 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 ARMS2P0C7Q2 107 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 AZU1P20160 251 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 RRN3P1Q2M238 152 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 LYZL1Q6UWQ5 148 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 ZNF705AQ6ZN79 300 aaPredicted RBP6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 ZNF575Q86XF7 245 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 CBLN2Q8IUK8 224 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 FER1L6-AS1Q8NA97 138 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 OR11H2Q8NH07 326 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 GTSF1Q8WW33 167 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 BORCS7Q96B45 105 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 RNF183Q96D59 192 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 IMMP2LQ96T52 175 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 NEU1Q99519 415 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 GFRA4Q9GZZ7 299 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 MDFICQ9P1T7 246 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 NAT8BQ9UHF3 227 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 VWFP04275 2813 aa6.17□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 FAM231BA6NCW3 169 aa6.16□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 SMIM9A6NGZ8 99 aa6.16□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 HIGD1CA8MV81 97 aa6.16□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 F2Z2F3 143 aa6.16□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 CXCL1P09341 107 aa6.16□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 EMP1P54849 157 aa6.16□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 ZNF415Q09FC8 603 aa6.16□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 SBSPONQ8IVN8 264 aa6.16□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 NUP35Q8NFH5 326 aa6.16□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 GSN-AS1Q9NRJ2 163 aa6.16□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 PHLDA3Q9Y5J5 127 aa6.16□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 ANK2Q01484 3957 aa6.16□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 SNURFLB1AK76 121 aa6.15□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 IGLC6P0CF74 106 aa6.15□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 RNASE3P12724 160 aaKnown RBP6.15□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 FOXA3P55318 350 aaPredicted RBP6.15□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 DEFA6Q01524 100 aa6.15□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 RIGQ13278 110 aa6.15□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 TWIST1Q15672 202 aa6.15□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 SPANXN1Q5VSR9 72 aa6.15□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 ZNF493Q6ZR52 646 aa6.15□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 BTF3L4Q96K17 158 aa6.15□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 OVOL2Q9BRP0 275 aa6.15□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 RETNQ9HD89 108 aa6.15□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 TP53TG1Q9Y2A0 90 aa6.15□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 X6R8D5 127 aa6.15□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 TRRAPQ9Y4A5 3859 aa6.15□□□□□ -1.42
NEDD8-MDP1-201ENST00000530579 A0A1B0GUT8 65 aa6.14□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 M0R381 172 aa6.14□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 OR5AL1P0C617 328 aa6.14□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 MED14OSP0DP75 135 aa6.14□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 CACNG7P62955 275 aa6.14□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 DNLZQ5SXM8 178 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms