RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 GOLT1AQ6ZVE7 132 aa13.96□□□□□ -0.17
TSPAN4-219ENST00000530404 NHLRC2Q8NBF2 726 aa13.96□□□□□ -0.17
TSPAN4-219ENST00000530404 TVP23CQ96ET8 276 aa13.96□□□□□ -0.17
TSPAN4-219ENST00000530404 OTORQ9NRC9 128 aa13.96□□□□□ -0.17
TSPAN4-219ENST00000530404 GNG5P63218 68 aa13.95□□□□□ -0.18
TSPAN4-219ENST00000530404 TDRG1Q3Y452 100 aa13.95□□□□□ -0.18
TSPAN4-219ENST00000530404 CMTM2Q8TAZ6 248 aa13.95□□□□□ -0.18
TSPAN4-219ENST00000530404 SCGB1C1Q8TD33 95 aa13.95□□□□□ -0.18
TSPAN4-219ENST00000530404 MBD2Q9UBB5 411 aa13.95□□□□□ -0.18
TSPAN4-219ENST00000530404 INMT-MINDY4F8WBC2 141 aa13.94□□□□□ -0.18
TSPAN4-219ENST00000530404 CYCSP99999 105 aaKnown RBP13.94□□□□□ -0.18
TSPAN4-219ENST00000530404 IFITM3Q01628 133 aa13.94□□□□□ -0.18
TSPAN4-219ENST00000530404 TMED6Q8WW62 240 aa13.94□□□□□ -0.18
TSPAN4-219ENST00000530404 SGK494Q96LW2 274 aa13.94□□□□□ -0.18
TSPAN4-219ENST00000530404 TRAV21A0A0B4J279 112 aa13.93□□□□□ -0.18
TSPAN4-219ENST00000530404 K7EP13 123 aa13.93□□□□□ -0.18
TSPAN4-219ENST00000530404 HMGB3O15347 200 aaKnown RBP13.93□□□□□ -0.18
TSPAN4-219ENST00000530404 UPK1BO75841 260 aa13.93□□□□□ -0.18
TSPAN4-219ENST00000530404 MPC2O95563 127 aa13.93□□□□□ -0.18
TSPAN4-219ENST00000530404 GATA1P15976 413 aaPredicted RBP13.93□□□□□ -0.18
TSPAN4-219ENST00000530404 PPT1P50897 306 aa13.93□□□□□ -0.18
TSPAN4-219ENST00000530404 C10orf126Q8N4M7 172 aa13.93□□□□□ -0.18
TSPAN4-219ENST00000530404 S100ZQ8WXG8 99 aa13.93□□□□□ -0.18
TSPAN4-219ENST00000530404 WFDC1Q9HC57 220 aa13.93□□□□□ -0.18
TSPAN4-219ENST00000530404 PSCAO43653 123 aa13.92□□□□□ -0.18
TSPAN4-219ENST00000530404 RPL12P30050 165 aaKnown RBP13.92□□□□□ -0.18
TSPAN4-219ENST00000530404 SDF2L1Q9HCN8 221 aa13.92□□□□□ -0.18
TSPAN4-219ENST00000530404 TREM1Q9NP99 234 aa13.92□□□□□ -0.18
TSPAN4-219ENST00000530404 IGLV5-52A0A0A0MRZ9 124 aa13.91□□□□□ -0.18
TSPAN4-219ENST00000530404 IGHV3-38A0A0C4DH36 116 aa13.91□□□□□ -0.18
TSPAN4-219ENST00000530404 LRCOL1A6NCL2 159 aa13.91□□□□□ -0.18
TSPAN4-219ENST00000530404 RAB2AP61019 212 aa13.91□□□□□ -0.18
TSPAN4-219ENST00000530404 FAM74A1Q5RGS3 127 aa13.91□□□□□ -0.18
TSPAN4-219ENST00000530404 Q9HAA7 133 aa13.91□□□□□ -0.18
TSPAN4-219ENST00000530404 IGHV3-73A0A0B4J1V6 119 aa13.9□□□□□ -0.18
TSPAN4-219ENST00000530404 A0A1W2PPV4 95 aa13.89□□□□□ -0.19
TSPAN4-219ENST00000530404 FBLL1A6NHQ2 334 aaKnown RBP13.89□□□□□ -0.19
TSPAN4-219ENST00000530404 SSNA1O43805 119 aa13.89□□□□□ -0.19
TSPAN4-219ENST00000530404 IGHV3-30P01768 117 aa13.89□□□□□ -0.19
TSPAN4-219ENST00000530404 IGHV3-33P01772 117 aa13.89□□□□□ -0.19
TSPAN4-219ENST00000530404 IGHV3-30-3P0DP02 117 aa13.89□□□□□ -0.19
TSPAN4-219ENST00000530404 IGHV3-30-5P0DP03 117 aa13.89□□□□□ -0.19
TSPAN4-219ENST00000530404 ACOT6Q3I5F7 207 aaPredicted RBP13.89□□□□□ -0.19
TSPAN4-219ENST00000530404 DPPA3Q6W0C5 159 aa13.89□□□□□ -0.19
TSPAN4-219ENST00000530404 LINC00299Q6ZSB3 139 aa13.89□□□□□ -0.19
TSPAN4-219ENST00000530404 SLC25A29Q8N8R3 303 aa13.89□□□□□ -0.19
TSPAN4-219ENST00000530404 ASB13Q8WXK3 278 aa13.89□□□□□ -0.19
TSPAN4-219ENST00000530404 PET100P0DJ07 73 aa13.88□□□□□ -0.19
TSPAN4-219ENST00000530404 ZNF80P51504 273 aaPredicted RBP13.88□□□□□ -0.19
TSPAN4-219ENST00000530404 LINC01556Q5JQF7 62 aa13.88□□□□□ -0.19
TSPAN4-219ENST00000530404 OR10J3Q5JRS4 329 aa13.88□□□□□ -0.19
TSPAN4-219ENST00000530404 PQLC2Q6ZP29 291 aa13.88□□□□□ -0.19
TSPAN4-219ENST00000530404 SH2D6Q7Z4S9 175 aa13.88□□□□□ -0.19
TSPAN4-219ENST00000530404 C11orf21Q9P2W6 132 aa13.88□□□□□ -0.19
TSPAN4-219ENST00000530404 IBA57-AS1B1ANH7 110 aa13.87□□□□□ -0.19
TSPAN4-219ENST00000530404 TIRAPP58753 221 aa13.87□□□□□ -0.19
TSPAN4-219ENST00000530404 ZNF876PQ49A33 203 aa13.87□□□□□ -0.19
TSPAN4-219ENST00000530404 CFAP126Q5VTH2 177 aa13.87□□□□□ -0.19
TSPAN4-219ENST00000530404 TMEM75Q8N9X5 138 aa13.87□□□□□ -0.19
TSPAN4-219ENST00000530404 KCNS1Q96KK3 526 aa13.87□□□□□ -0.19
TSPAN4-219ENST00000530404 OR10G9Q8NGN4 311 aa13.86□□□□□ -0.19
TSPAN4-219ENST00000530404 OR10G7Q8NGN6 311 aa13.86□□□□□ -0.19
TSPAN4-219ENST00000530404 MARVELD1Q9BSK0 173 aa13.86□□□□□ -0.19
TSPAN4-219ENST00000530404 TRAV8-6A0A0B4J262 113 aa13.85□□□□□ -0.19
TSPAN4-219ENST00000530404 RS1O15537 224 aa13.85□□□□□ -0.19
TSPAN4-219ENST00000530404 PFN1P07737 140 aaKnown RBP13.85□□□□□ -0.19
TSPAN4-219ENST00000530404 ARL14EPLP0DKL9 152 aa13.85□□□□□ -0.19
TSPAN4-219ENST00000530404 Q8N814 137 aa13.85□□□□□ -0.19
TSPAN4-219ENST00000530404 PRADC1Q9BSG0 188 aa13.85□□□□□ -0.19
TSPAN4-219ENST00000530404 FAM229AH3BQW9 127 aa13.84□□□□□ -0.19
TSPAN4-219ENST00000530404 RHOHQ15669 191 aa13.84□□□□□ -0.19
TSPAN4-219ENST00000530404 Q8N3U1 123 aa13.84□□□□□ -0.19
TSPAN4-219ENST00000530404 ARL6IP6Q8N6S5 226 aa13.84□□□□□ -0.19
TSPAN4-219ENST00000530404 NDFIP1Q9BT67 221 aa13.84□□□□□ -0.19
TSPAN4-219ENST00000530404 FAM30AQ9NZY2 134 aa13.84□□□□□ -0.19
TSPAN4-219ENST00000530404 PGPEP1LA6NFU8 196 aa13.83□□□□□ -0.2
TSPAN4-219ENST00000530404 GCGP01275 180 aa13.83□□□□□ -0.2
TSPAN4-219ENST00000530404 NTN5Q8WTR8 489 aaPredicted RBP13.83□□□□□ -0.2
TSPAN4-219ENST00000530404 TMEM70Q9BUB7 260 aa13.83□□□□□ -0.2
TSPAN4-219ENST00000530404 CDC34P49427 236 aaPredicted RBP13.82□□□□□ -0.2
TSPAN4-219ENST00000530404 ZNF506Q5JVG8 444 aa13.82□□□□□ -0.2
TSPAN4-219ENST00000530404 LELP1Q5T871 98 aa13.82□□□□□ -0.2
TSPAN4-219ENST00000530404 Q6ZSN1 163 aa13.82□□□□□ -0.2
TSPAN4-219ENST00000530404 C9orf85Q96MD7 179 aa13.82□□□□□ -0.2
TSPAN4-219ENST00000530404 PSG8Q9UQ74 426 aa13.82□□□□□ -0.2
TSPAN4-219ENST00000530404 TRBV6-4A0A1B0GX49 114 aa13.81□□□□□ -0.2
TSPAN4-219ENST00000530404 TCRAP04437 139 aa13.81□□□□□ -0.2
TSPAN4-219ENST00000530404 WFDC2Q14508 124 aa13.81□□□□□ -0.2
TSPAN4-219ENST00000530404 TAAR5O14804 337 aa13.8□□□□□ -0.2
TSPAN4-219ENST00000530404 STAG3L2P0CL84 134 aa13.8□□□□□ -0.2
TSPAN4-219ENST00000530404 STAG3L3P0CL85 134 aa13.8□□□□□ -0.2
TSPAN4-219ENST00000530404 RNASE3P12724 160 aaKnown RBP13.8□□□□□ -0.2
TSPAN4-219ENST00000530404 PRNTQ86SH4 94 aa13.8□□□□□ -0.2
TSPAN4-219ENST00000530404 C5orf17Q8NAS9 161 aa13.8□□□□□ -0.2
TSPAN4-219ENST00000530404 HSD17B11Q8NBQ5 300 aa13.8□□□□□ -0.2
TSPAN4-219ENST00000530404 ATP6V0E2Q8NHE4 81 aa13.8□□□□□ -0.2
TSPAN4-219ENST00000530404 GTSF1LQ9H1H1 148 aa13.8□□□□□ -0.2
TSPAN4-219ENST00000530404 IGLV2-11P01706 119 aa13.79□□□□□ -0.2
TSPAN4-219ENST00000530404 GCHFRP30047 84 aa13.79□□□□□ -0.2
TSPAN4-219ENST00000530404 SERTM2A0A1B0GWG4 89 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms