RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 FAM229AH3BQW9 127 aa7.73□□□□□ -1.17
SF3B2-208ENST00000529994 SIVA1O15304 175 aa7.73□□□□□ -1.17
SF3B2-208ENST00000529994 ARPC5O15511 151 aa7.73□□□□□ -1.17
SF3B2-208ENST00000529994 STAG3L2P0CL84 134 aa7.73□□□□□ -1.17
SF3B2-208ENST00000529994 STAG3L3P0CL85 134 aa7.73□□□□□ -1.17
SF3B2-208ENST00000529994 GCHFRP30047 84 aa7.73□□□□□ -1.17
SF3B2-208ENST00000529994 TMEM183BQ1AE95 376 aa7.73□□□□□ -1.17
SF3B2-208ENST00000529994 Q6ZSN1 163 aa7.73□□□□□ -1.17
SF3B2-208ENST00000529994 TMEM183AQ8IXX5 376 aa7.73□□□□□ -1.17
SF3B2-208ENST00000529994 ASB13Q8WXK3 278 aa7.73□□□□□ -1.17
SF3B2-208ENST00000529994 ACTR3CQ9C0K3 210 aaPredicted RBP7.73□□□□□ -1.17
SF3B2-208ENST00000529994 TNFSF18Q9UNG2 199 aa7.73□□□□□ -1.17
SF3B2-208ENST00000529994 A0A087WTM6 91 aa7.72□□□□□ -1.17
SF3B2-208ENST00000529994 SPINK4O60575 86 aa7.72□□□□□ -1.17
SF3B2-208ENST00000529994 MBP02144 154 aa7.72□□□□□ -1.17
SF3B2-208ENST00000529994 IBA57Q5T440 356 aaKnown RBP7.72□□□□□ -1.17
SF3B2-208ENST00000529994 FAM159AQ6UWV7 190 aa7.72□□□□□ -1.17
SF3B2-208ENST00000529994 VSIG2Q96IQ7 327 aa7.72□□□□□ -1.17
SF3B2-208ENST00000529994 TREM1Q9NP99 234 aa7.72□□□□□ -1.17
SF3B2-208ENST00000529994 TRGV11A0A075B6L2 103 aa7.71□□□□□ -1.18
SF3B2-208ENST00000529994 TRBV7-9A0A0J9YWB2 115 aa7.71□□□□□ -1.18
SF3B2-208ENST00000529994 H3BNG1 76 aa7.71□□□□□ -1.18
SF3B2-208ENST00000529994 NXPH4O95158 308 aa7.71□□□□□ -1.18
SF3B2-208ENST00000529994 SERF2P84101 59 aa7.71□□□□□ -1.18
SF3B2-208ENST00000529994 Q6AWC8 147 aa7.71□□□□□ -1.18
SF3B2-208ENST00000529994 ST6GAL2Q96JF0 529 aa7.71□□□□□ -1.18
SF3B2-208ENST00000529994 NDFIP1Q9BT67 221 aa7.71□□□□□ -1.18
SF3B2-208ENST00000529994 G3V3Q6 166 aa7.7□□□□□ -1.18
SF3B2-208ENST00000529994 CXorf1O96002 111 aa7.7□□□□□ -1.18
SF3B2-208ENST00000529994 SFTA3P0C7M3 94 aa7.7□□□□□ -1.18
SF3B2-208ENST00000529994 GCSHP23434 173 aa7.7□□□□□ -1.18
SF3B2-208ENST00000529994 FGF8P55075 233 aaPredicted RBP7.7□□□□□ -1.18
SF3B2-208ENST00000529994 UBE2G2P60604 165 aa7.7□□□□□ -1.18
SF3B2-208ENST00000529994 SUMO1P63165 101 aaKnown RBP7.7□□□□□ -1.18
SF3B2-208ENST00000529994 AKR1C8PQ5T2L2 129 aa7.7□□□□□ -1.18
SF3B2-208ENST00000529994 PRNTQ86SH4 94 aa7.7□□□□□ -1.18
SF3B2-208ENST00000529994 C5orf17Q8NAS9 161 aa7.7□□□□□ -1.18
SF3B2-208ENST00000529994 TVP23CQ96ET8 276 aa7.7□□□□□ -1.18
SF3B2-208ENST00000529994 C8orf49Q96NF6 230 aa7.7□□□□□ -1.18
SF3B2-208ENST00000529994 TMEM167BQ9NRX6 74 aa7.7□□□□□ -1.18
SF3B2-208ENST00000529994 LENEPQ9Y5L5 61 aa7.7□□□□□ -1.18
SF3B2-208ENST00000529994 TRAV21A0A0B4J279 112 aa7.69□□□□□ -1.18
SF3B2-208ENST00000529994 GGTLC3B5MD39 225 aa7.69□□□□□ -1.18
SF3B2-208ENST00000529994 K7EQM0 130 aa7.69□□□□□ -1.18
SF3B2-208ENST00000529994 PAX4O43316 350 aa7.69□□□□□ -1.18
SF3B2-208ENST00000529994 GNRH2O43555 120 aa7.69□□□□□ -1.18
SF3B2-208ENST00000529994 TCRAP04437 139 aa7.69□□□□□ -1.18
SF3B2-208ENST00000529994 ZNF726P1Q15940 193 aa7.69□□□□□ -1.18
SF3B2-208ENST00000529994 TMED6Q8WW62 240 aa7.69□□□□□ -1.18
SF3B2-208ENST00000529994 UBR4Q5T4S7 5183 aa7.69□□□□□ -1.18
SF3B2-208ENST00000529994 TRGV4A0A0C4DH28 118 aa7.68□□□□□ -1.18
SF3B2-208ENST00000529994 CTXND1A0A1B0GTU2 59 aa7.68□□□□□ -1.18
SF3B2-208ENST00000529994 IFNA7P01567 189 aa7.68□□□□□ -1.18
SF3B2-208ENST00000529994 TYMSP04818 313 aa7.68□□□□□ -1.18
SF3B2-208ENST00000529994 NFE4Q86UQ8 179 aa7.68□□□□□ -1.18
SF3B2-208ENST00000529994 SDF2L1Q9HCN8 221 aa7.68□□□□□ -1.18
SF3B2-208ENST00000529994 PSG8Q9UQ74 426 aa7.68□□□□□ -1.18
SF3B2-208ENST00000529994 ICOSQ9Y6W8 199 aa7.68□□□□□ -1.18
SF3B2-208ENST00000529994 TRAV34A0A0B4J273 112 aa7.67□□□□□ -1.18
SF3B2-208ENST00000529994 SERTM2A0A1B0GWG4 89 aa7.67□□□□□ -1.18
SF3B2-208ENST00000529994 GCGP01275 180 aa7.67□□□□□ -1.18
SF3B2-208ENST00000529994 FLI1Q01543 452 aaPredicted RBP7.67□□□□□ -1.18
SF3B2-208ENST00000529994 ZFP69Q49AA0 526 aa7.67□□□□□ -1.18
SF3B2-208ENST00000529994 CYB561D1Q8N8Q1 229 aa7.67□□□□□ -1.18
SF3B2-208ENST00000529994 TMEM75Q8N9X5 138 aa7.67□□□□□ -1.18
SF3B2-208ENST00000529994 ZNF479Q96JC4 524 aa7.67□□□□□ -1.18
SF3B2-208ENST00000529994 SPXQ9BT56 116 aa7.67□□□□□ -1.18
SF3B2-208ENST00000529994 CYTL1Q9NRR1 136 aa7.67□□□□□ -1.18
SF3B2-208ENST00000529994 EPDR1Q9UM22 224 aa7.67□□□□□ -1.18
SF3B2-208ENST00000529994 IGHV3-16A0A0C4DH30 117 aa7.66□□□□□ -1.18
SF3B2-208ENST00000529994 A0A1B0GV50 99 aa7.66□□□□□ -1.18
SF3B2-208ENST00000529994 MAP1LC3B2A6NCE7 125 aa7.66□□□□□ -1.18
SF3B2-208ENST00000529994 C9JCJ5 164 aa7.66□□□□□ -1.18
SF3B2-208ENST00000529994 TAAR5O14804 337 aa7.66□□□□□ -1.18
SF3B2-208ENST00000529994 ZNF80P51504 273 aaPredicted RBP7.66□□□□□ -1.18
SF3B2-208ENST00000529994 FHL2Q14192 279 aa7.66□□□□□ -1.18
SF3B2-208ENST00000529994 ARL6IP6Q8N6S5 226 aa7.66□□□□□ -1.18
SF3B2-208ENST00000529994 SUN5Q8TC36 379 aa7.66□□□□□ -1.18
SF3B2-208ENST00000529994 LINC00479Q96M42 142 aa7.66□□□□□ -1.18
SF3B2-208ENST00000529994 MAP1LC3BQ9GZQ8 125 aa7.66□□□□□ -1.18
SF3B2-208ENST00000529994 PRO0255Q9UI72 69 aa7.66□□□□□ -1.18
SF3B2-208ENST00000529994 HHLA3Q9XRX5 114 aa7.66□□□□□ -1.18
SF3B2-208ENST00000529994 IGLV5-52A0A0A0MRZ9 124 aa7.65□□□□□ -1.18
SF3B2-208ENST00000529994 M0R2P5 195 aa7.65□□□□□ -1.18
SF3B2-208ENST00000529994 CRYBA4P53673 196 aa7.65□□□□□ -1.18
SF3B2-208ENST00000529994 SMUG1Q53HV7 270 aa7.65□□□□□ -1.18
SF3B2-208ENST00000529994 OR4C5Q8NGB2 326 aa7.65□□□□□ -1.18
SF3B2-208ENST00000529994 PCNPQ8WW12 178 aaKnown RBP7.65□□□□□ -1.18
SF3B2-208ENST00000529994 KCNS1Q96KK3 526 aa7.65□□□□□ -1.18
SF3B2-208ENST00000529994 MSRB1Q9NZV6 116 aa7.65□□□□□ -1.18
SF3B2-208ENST00000529994 C11orf21Q9P2W6 132 aa7.65□□□□□ -1.18
SF3B2-208ENST00000529994 LY96Q9Y6Y9 160 aa7.65□□□□□ -1.18
SF3B2-208ENST00000529994 A0A1W2PRE2 83 aa7.64□□□□□ -1.19
SF3B2-208ENST00000529994 PEX7O00628 323 aa7.64□□□□□ -1.19
SF3B2-208ENST00000529994 IGLV2-11P01706 119 aa7.64□□□□□ -1.19
SF3B2-208ENST00000529994 GYPEP15421 78 aa7.64□□□□□ -1.19
SF3B2-208ENST00000529994 FHITP49789 147 aa7.64□□□□□ -1.19
SF3B2-208ENST00000529994 PPT1P50897 306 aa7.64□□□□□ -1.19
SF3B2-208ENST00000529994 TDRG1Q3Y452 100 aa7.64□□□□□ -1.19
SF3B2-208ENST00000529994 LYPD5Q6UWN5 251 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms