RNA–Protein interactions for RNA: ENST00000527797.6

VPS28-208, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 1,609 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-208ENST00000527797 WIPF1O43516 503 aa15.48■□□□□ 0.07
VPS28-208ENST00000527797 ANXA2RQ3ZCQ2 193 aa15.48■□□□□ 0.07
VPS28-208ENST00000527797 MUC21Q5SSG8 566 aa15.48■□□□□ 0.07
VPS28-208ENST00000527797 RASL11AQ6T310 242 aa15.48■□□□□ 0.07
VPS28-208ENST00000527797 LYZL1Q6UWQ5 148 aa15.48■□□□□ 0.07
VPS28-208ENST00000527797 BORCS7Q96B45 105 aa15.48■□□□□ 0.07
VPS28-208ENST00000527797 IGLC6P0CF74 106 aa15.47■□□□□ 0.07
VPS28-208ENST00000527797 FAM159AQ6UWV7 190 aa15.47■□□□□ 0.07
VPS28-208ENST00000527797 SORL1Q92673 2214 aa15.47■□□□□ 0.07
VPS28-208ENST00000527797 AMBPP02760 352 aa15.46■□□□□ 0.07
VPS28-208ENST00000527797 TRGC2P03986 189 aa15.46■□□□□ 0.07
VPS28-208ENST00000527797 FRMD6-AS1P0C7T7 363 aa15.46■□□□□ 0.07
VPS28-208ENST00000527797 NUTF2P61970 127 aaKnown RBP15.46■□□□□ 0.07
VPS28-208ENST00000527797 WDR73Q6P4I2 378 aa15.46■□□□□ 0.07
VPS28-208ENST00000527797 KCNS1Q96KK3 526 aa15.46■□□□□ 0.07
VPS28-208ENST00000527797 WFDC10AQ9H1F0 79 aa15.46■□□□□ 0.07
VPS28-208ENST00000527797 A0A1B0GUT8 65 aa15.46■□□□□ 0.06
VPS28-208ENST00000527797 CRXO43186 299 aaPredicted RBP15.46■□□□□ 0.06
VPS28-208ENST00000527797 RIGQ13278 110 aa15.46■□□□□ 0.06
VPS28-208ENST00000527797 GNB1LQ9BYB4 327 aa15.46■□□□□ 0.06
VPS28-208ENST00000527797 TRAPPC1Q9Y5R8 145 aa15.46■□□□□ 0.06
VPS28-208ENST00000527797 A0A1B0GXF2 115 aa15.45■□□□□ 0.06
VPS28-208ENST00000527797 F2Z2F3 143 aa15.45■□□□□ 0.06
VPS28-208ENST00000527797 CTRLP40313 264 aa15.45■□□□□ 0.06
VPS28-208ENST00000527797 RAB4BP61018 213 aa15.45■□□□□ 0.06
VPS28-208ENST00000527797 HBBP68871 147 aa15.45■□□□□ 0.06
VPS28-208ENST00000527797 SNURFLB1AK76 121 aa15.44■□□□□ 0.06
VPS28-208ENST00000527797 ARMS2P0C7Q2 107 aa15.44■□□□□ 0.06
VPS28-208ENST00000527797 ASIPP42127 132 aa15.44■□□□□ 0.06
VPS28-208ENST00000527797 CAMPP49913 170 aa15.44■□□□□ 0.06
VPS28-208ENST00000527797 PRR31Q5SQ13 230 aa15.44■□□□□ 0.06
VPS28-208ENST00000527797 RAB5BP61020 215 aa15.43■□□□□ 0.06
VPS28-208ENST00000527797 TDRG1Q3Y452 100 aa15.43■□□□□ 0.06
VPS28-208ENST00000527797 TMEM136Q6ZRR5 245 aa15.43■□□□□ 0.06
VPS28-208ENST00000527797 DEFB125Q8N687 156 aa15.43■□□□□ 0.06
VPS28-208ENST00000527797 IGHV1OR15-1A0A075B7D0 117 aa15.43■□□□□ 0.06
VPS28-208ENST00000527797 A0A1B0GW15 77 aa15.43■□□□□ 0.06
VPS28-208ENST00000527797 GNRH2O43555 120 aa15.43■□□□□ 0.06
VPS28-208ENST00000527797 INSP01308 110 aa15.43■□□□□ 0.06
VPS28-208ENST00000527797 MT-ND6P03923 174 aa15.43■□□□□ 0.06
VPS28-208ENST00000527797 S100A4P26447 101 aaKnown RBP15.43■□□□□ 0.06
VPS28-208ENST00000527797 FABP9Q0Z7S8 132 aa15.43■□□□□ 0.06
VPS28-208ENST00000527797 FRZBQ92765 325 aa15.43■□□□□ 0.06
VPS28-208ENST00000527797 C20orf144Q9BQM9 153 aa15.43■□□□□ 0.06
VPS28-208ENST00000527797 AGRNO00468 2067 aa15.42■□□□□ 0.06
VPS28-208ENST00000527797 HLA-DQA1P01909 254 aa15.42■□□□□ 0.06
VPS28-208ENST00000527797 S100A8P05109 93 aa15.42■□□□□ 0.06
VPS28-208ENST00000527797 DNLZQ5SXM8 178 aa15.42■□□□□ 0.06
VPS28-208ENST00000527797 SSBP4Q9BWG4 385 aaPredicted RBP15.42■□□□□ 0.06
VPS28-208ENST00000527797 OR5AL1P0C617 328 aa15.41■□□□□ 0.06
VPS28-208ENST00000527797 RBMY1A1P0DJD3 496 aaKnown RBP15.41■□□□□ 0.06
VPS28-208ENST00000527797 RBMY1CP0DJD4 496 aa15.41■□□□□ 0.06
VPS28-208ENST00000527797 RPL35AP18077 110 aaKnown RBP15.41■□□□□ 0.06
VPS28-208ENST00000527797 RBMY1FQ15415 496 aaKnown RBP15.41■□□□□ 0.06
VPS28-208ENST00000527797 ZFP82Q8N141 532 aa15.41■□□□□ 0.06
VPS28-208ENST00000527797 MRPL18Q9H0U6 180 aaKnown RBP15.41■□□□□ 0.06
VPS28-208ENST00000527797 XCL2Q9UBD3 114 aa15.41■□□□□ 0.06
VPS28-208ENST00000527797 MUC21A0A0G2JKD1 596 aa15.4■□□□□ 0.06
VPS28-208ENST00000527797 MUC21A0A140T8X8 626 aa15.4■□□□□ 0.06
VPS28-208ENST00000527797 H3BVH4 76 aa15.4■□□□□ 0.06
VPS28-208ENST00000527797 SNAI2O43623 268 aa15.4■□□□□ 0.06
VPS28-208ENST00000527797 MED14OSP0DP75 135 aa15.4■□□□□ 0.06
VPS28-208ENST00000527797 MORN3Q6PF18 240 aaPredicted RBP15.4■□□□□ 0.06
VPS28-208ENST00000527797 PHOX2AO14813 284 aa15.39■□□□□ 0.05
VPS28-208ENST00000527797 SSTP61278 116 aa15.39■□□□□ 0.05
VPS28-208ENST00000527797 CNFNQ9BYD5 112 aa15.39■□□□□ 0.05
VPS28-208ENST00000527797 TIMM8BQ9Y5J9 83 aaPredicted RBP15.39■□□□□ 0.05
VPS28-208ENST00000527797 NTF3P20783 257 aa15.39■□□□□ 0.05
VPS28-208ENST00000527797 OXLD1Q5BKU9 147 aa15.39■□□□□ 0.05
VPS28-208ENST00000527797 CACNG7P62955 275 aa15.38■□□□□ 0.05
VPS28-208ENST00000527797 TWIST1Q15672 202 aa15.38■□□□□ 0.05
VPS28-208ENST00000527797 LURAP1LQ8IV03 231 aa15.38■□□□□ 0.05
VPS28-208ENST00000527797 LINC01587Q99440 93 aa15.38■□□□□ 0.05
VPS28-208ENST00000527797 TP53TG3Q9ULZ0 132 aa15.38■□□□□ 0.05
VPS28-208ENST00000527797 TRGV11A0A075B6L2 103 aa15.37■□□□□ 0.05
VPS28-208ENST00000527797 APCSP02743 223 aa15.37■□□□□ 0.05
VPS28-208ENST00000527797 RNASE3P12724 160 aaKnown RBP15.37■□□□□ 0.05
VPS28-208ENST00000527797 Q8N1Y9 231 aa15.37■□□□□ 0.05
VPS28-208ENST00000527797 OR10AG1Q8NH19 301 aa15.37■□□□□ 0.05
VPS28-208ENST00000527797 MDFIQ99750 246 aa15.37■□□□□ 0.05
VPS28-208ENST00000527797 C1QTNF4Q9BXJ3 329 aa15.37■□□□□ 0.05
VPS28-208ENST00000527797 CBY3A6NI87 242 aa15.36■□□□□ 0.05
VPS28-208ENST00000527797 TRGC1P0CF51 173 aa15.36■□□□□ 0.05
VPS28-208ENST00000527797 SPANXN1Q5VSR9 72 aa15.36■□□□□ 0.05
VPS28-208ENST00000527797 TMEM256Q8N2U0 113 aa15.36■□□□□ 0.05
VPS28-208ENST00000527797 LINC00467Q9BRT7 94 aa15.36■□□□□ 0.05
VPS28-208ENST00000527797 SCRT2Q9NQ03 307 aa15.36■□□□□ 0.05
VPS28-208ENST00000527797 IGHV3-16A0A0C4DH30 117 aa15.35■□□□□ 0.05
VPS28-208ENST00000527797 GATD1Q8NB37 220 aa15.35■□□□□ 0.05
VPS28-208ENST00000527797 TMEM208Q9BTX3 173 aa15.35■□□□□ 0.05
VPS28-208ENST00000527797 ZMAT5Q9UDW3 170 aaKnown RBP15.35■□□□□ 0.05
VPS28-208ENST00000527797 PHLDA3Q9Y5J5 127 aa15.35■□□□□ 0.05
VPS28-208ENST00000527797 IGHV4-4A0A075B6R2 117 aa15.35■□□□□ 0.05
VPS28-208ENST00000527797 HTN1P15515 57 aa15.35■□□□□ 0.05
VPS28-208ENST00000527797 VWFP04275 2813 aa15.34■□□□□ 0.05
VPS28-208ENST00000527797 HIST1H2BKO60814 126 aa15.34■□□□□ 0.05
VPS28-208ENST00000527797 HIST1H2BJP06899 126 aa15.34■□□□□ 0.05
VPS28-208ENST00000527797 GIG44P09565 113 aaPredicted RBP15.34■□□□□ 0.05
VPS28-208ENST00000527797 HIST1H2BOP23527 126 aa15.34■□□□□ 0.05
VPS28-208ENST00000527797 HIST1H2BBP33778 126 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms