RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 F6UB75 175 aa13.29□□□□□ -0.28
USH1C-205ENST00000527020 IGHV4-59P01825 116 aa13.28□□□□□ -0.28
USH1C-205ENST00000527020 DSCR9P59020 149 aa13.28□□□□□ -0.28
USH1C-205ENST00000527020 SPANXN1Q5VSR9 72 aa13.28□□□□□ -0.28
USH1C-205ENST00000527020 Q8N8P6 123 aa13.28□□□□□ -0.28
USH1C-205ENST00000527020 C18orf15Q96N68 181 aa13.28□□□□□ -0.28
USH1C-205ENST00000527020 UFC1Q9Y3C8 167 aa13.28□□□□□ -0.28
USH1C-205ENST00000527020 PRSS47A8MTI9 375 aa13.28□□□□□ -0.28
USH1C-205ENST00000527020 GATA3P23771 443 aa13.28□□□□□ -0.28
USH1C-205ENST00000527020 RPL11P62913 178 aaKnown RBP13.28□□□□□ -0.28
USH1C-205ENST00000527020 DAZ1Q9NQZ3 744 aaKnown RBP13.28□□□□□ -0.28
USH1C-205ENST00000527020 DKK2Q9UBU2 259 aa13.28□□□□□ -0.28
USH1C-205ENST00000527020 ZNF580Q9UK33 172 aa13.28□□□□□ -0.28
USH1C-205ENST00000527020 ANKRD17O75179 2603 aaKnown RBP13.27□□□□□ -0.28
USH1C-205ENST00000527020 IGKV3-7A0A075B6H7 116 aa13.27□□□□□ -0.28
USH1C-205ENST00000527020 KIR3DS1Q14943 382 aa13.27□□□□□ -0.28
USH1C-205ENST00000527020 DEFB112Q30KQ8 113 aa13.27□□□□□ -0.28
USH1C-205ENST00000527020 DEFB125Q8N687 156 aa13.27□□□□□ -0.28
USH1C-205ENST00000527020 SMPXQ9UHP9 88 aa13.27□□□□□ -0.28
USH1C-205ENST00000527020 SPRY2O43597 315 aa13.27□□□□□ -0.29
USH1C-205ENST00000527020 SMIM15Q7Z3B0 74 aa13.27□□□□□ -0.29
USH1C-205ENST00000527020 APRG1Q8IVJ8 170 aa13.27□□□□□ -0.29
USH1C-205ENST00000527020 OR1N2Q8NGR9 330 aa13.27□□□□□ -0.29
USH1C-205ENST00000527020 TRAV21A0A0B4J279 112 aa13.26□□□□□ -0.29
USH1C-205ENST00000527020 SLC25A16P16260 332 aa13.26□□□□□ -0.29
USH1C-205ENST00000527020 TMEM158Q8WZ71 300 aa13.26□□□□□ -0.29
USH1C-205ENST00000527020 PEF1Q9UBV8 284 aaKnown RBP13.26□□□□□ -0.29
USH1C-205ENST00000527020 PSMB8P28062 276 aa13.25□□□□□ -0.29
USH1C-205ENST00000527020 C10orf99Q6UWK7 81 aa13.25□□□□□ -0.29
USH1C-205ENST00000527020 USP24Q9UPU5 2620 aa13.25□□□□□ -0.29
USH1C-205ENST00000527020 SRD5A1P18405 259 aa13.25□□□□□ -0.29
USH1C-205ENST00000527020 C12orf54Q6X4T0 127 aa13.25□□□□□ -0.29
USH1C-205ENST00000527020 LINC01356Q8N9X3 169 aa13.25□□□□□ -0.29
USH1C-205ENST00000527020 TCTAP57738 103 aa13.24□□□□□ -0.29
USH1C-205ENST00000527020 ODF1Q14990 250 aa13.24□□□□□ -0.29
USH1C-205ENST00000527020 ANXA2RQ3ZCQ2 193 aa13.24□□□□□ -0.29
USH1C-205ENST00000527020 ZMAT4Q9H898 229 aa13.24□□□□□ -0.29
USH1C-205ENST00000527020 K7EMT4 169 aa13.24□□□□□ -0.29
USH1C-205ENST00000527020 TAX1BP3O14907 124 aa13.24□□□□□ -0.29
USH1C-205ENST00000527020 CD5LO43866 347 aa13.24□□□□□ -0.29
USH1C-205ENST00000527020 PRB1P04280 392 aa13.24□□□□□ -0.29
USH1C-205ENST00000527020 RNASE4P34096 147 aaKnown RBP13.24□□□□□ -0.29
USH1C-205ENST00000527020 BOD1L2Q8IYS8 172 aa13.24□□□□□ -0.29
USH1C-205ENST00000527020 USP9YO00507 2555 aaPredicted RBP13.24□□□□□ -0.29
USH1C-205ENST00000527020 MUC4Q99102 2169 aa13.23□□□□□ -0.29
USH1C-205ENST00000527020 CCL25O15444 150 aa13.22□□□□□ -0.29
USH1C-205ENST00000527020 MAPK1IP1LQ8NDC0 245 aa13.22□□□□□ -0.29
USH1C-205ENST00000527020 ZFYVE26Q68DK2 2539 aa13.22□□□□□ -0.29
USH1C-205ENST00000527020 TRBV7-9A0A0J9YWB2 115 aa13.22□□□□□ -0.29
USH1C-205ENST00000527020 M0R381 172 aa13.22□□□□□ -0.29
USH1C-205ENST00000527020 DCANP1Q8TF63 244 aa13.22□□□□□ -0.29
USH1C-205ENST00000527020 MRAP2Q96G30 205 aa13.22□□□□□ -0.29
USH1C-205ENST00000527020 POLQO75417 2590 aa13.22□□□□□ -0.29
USH1C-205ENST00000527020 ASIPP42127 132 aa13.21□□□□□ -0.29
USH1C-205ENST00000527020 MXRA5Q9NR99 2828 aa13.21□□□□□ -0.3
USH1C-205ENST00000527020 GNRH2O43555 120 aa13.21□□□□□ -0.3
USH1C-205ENST00000527020 SMIM17P0DL12 118 aa13.21□□□□□ -0.3
USH1C-205ENST00000527020 RNASE3P12724 160 aaKnown RBP13.21□□□□□ -0.3
USH1C-205ENST00000527020 LAGE3Q14657 143 aa13.21□□□□□ -0.3
USH1C-205ENST00000527020 HHLA3Q9XRX5 114 aa13.21□□□□□ -0.3
USH1C-205ENST00000527020 CR1P17927 2039 aa13.21□□□□□ -0.3
USH1C-205ENST00000527020 CENPEQ02224 2701 aa13.2□□□□□ -0.3
USH1C-205ENST00000527020 UBR5O95071 2799 aaPredicted RBP13.2□□□□□ -0.3
USH1C-205ENST00000527020 MED14OSP0DP75 135 aa13.2□□□□□ -0.3
USH1C-205ENST00000527020 PCP2Q8IVA1 136 aa13.2□□□□□ -0.3
USH1C-205ENST00000527020 ZNF462Q96JM2 2506 aa13.2□□□□□ -0.3
USH1C-205ENST00000527020 KLLNB2CW77 178 aa13.2□□□□□ -0.3
USH1C-205ENST00000527020 S100A4P26447 101 aaKnown RBP13.2□□□□□ -0.3
USH1C-205ENST00000527020 SRSF1Q07955 248 aaKnown RBP eCLIP13.2□□□□□ -0.3
USH1C-205ENST00000527020 UBE2V1Q13404 147 aa13.2□□□□□ -0.3
USH1C-205ENST00000527020 J3QLI3 93 aa13.19□□□□□ -0.3
USH1C-205ENST00000527020 TGFAP01135 160 aa13.19□□□□□ -0.3
USH1C-205ENST00000527020 PRSS1P07477 247 aa13.19□□□□□ -0.3
USH1C-205ENST00000527020 ERASQ7Z444 233 aa13.19□□□□□ -0.3
USH1C-205ENST00000527020 RASL10AQ92737 203 aa13.19□□□□□ -0.3
USH1C-205ENST00000527020 BBC3Q96PG8 261 aaPredicted RBP13.19□□□□□ -0.3
USH1C-205ENST00000527020 TMEM97Q5BJF2 176 aa13.18□□□□□ -0.3
USH1C-205ENST00000527020 C14orf178Q8N769 122 aaPredicted RBP13.18□□□□□ -0.3
USH1C-205ENST00000527020 FOXC2Q99958 501 aa13.18□□□□□ -0.3
USH1C-205ENST00000527020 SMIM2Q9BVW6 85 aa13.18□□□□□ -0.3
USH1C-205ENST00000527020 DPH3P1Q9H4G8 78 aa13.18□□□□□ -0.3
USH1C-205ENST00000527020 PHLDA3Q9Y5J5 127 aa13.18□□□□□ -0.3
USH1C-205ENST00000527020 FAM208BQ5VWN6 2430 aa13.18□□□□□ -0.3
USH1C-205ENST00000527020 RNF223E7ERA6 249 aa13.18□□□□□ -0.3
USH1C-205ENST00000527020 PTTG1IPP53801 180 aa13.18□□□□□ -0.3
USH1C-205ENST00000527020 IGKV2D-26A0A0A0MRZ7 120 aa13.17□□□□□ -0.3
USH1C-205ENST00000527020 TMEM89A2RUT3 159 aa13.17□□□□□ -0.3
USH1C-205ENST00000527020 NMUP48645 174 aa13.17□□□□□ -0.3
USH1C-205ENST00000527020 DOPEY2Q9Y3R5 2298 aa13.17□□□□□ -0.3
USH1C-205ENST00000527020 LRRK2Q5S007 2527 aa13.17□□□□□ -0.3
USH1C-205ENST00000527020 ATP5LO75964 103 aa13.17□□□□□ -0.3
USH1C-205ENST00000527020 FSHBP01225 129 aa13.17□□□□□ -0.3
USH1C-205ENST00000527020 OR9G4Q8NGQ1 327 aa13.17□□□□□ -0.3
USH1C-205ENST00000527020 RPL39LQ96EH5 51 aaKnown RBP13.17□□□□□ -0.3
USH1C-205ENST00000527020 NXPH4O95158 308 aa13.16□□□□□ -0.3
USH1C-205ENST00000527020 IGKCP01834 107 aa13.16□□□□□ -0.3
USH1C-205ENST00000527020 ADAMTSL5Q6ZMM2 481 aa13.16□□□□□ -0.3
USH1C-205ENST00000527020 SIVA1O15304 175 aa13.15□□□□□ -0.3
USH1C-205ENST00000527020 COX6B1P14854 86 aa13.15□□□□□ -0.3
USH1C-205ENST00000527020 ID1P41134 155 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms