RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 K7EIM0 57 aa3.65□□□□□ -1.83
HIPK3-204ENST00000525975 CD7P09564 240 aa3.65□□□□□ -1.83
HIPK3-204ENST00000525975 WT1P19544 449 aaPredicted RBP3.65□□□□□ -1.83
HIPK3-204ENST00000525975 S100A4P26447 101 aaKnown RBP3.65□□□□□ -1.83
HIPK3-204ENST00000525975 ID1P41134 155 aa3.65□□□□□ -1.83
HIPK3-204ENST00000525975 DLX1P56177 255 aa3.65□□□□□ -1.83
HIPK3-204ENST00000525975 ATXN8Q156A1 80 aa3.65□□□□□ -1.83
HIPK3-204ENST00000525975 LINC00311Q8N616 119 aa3.65□□□□□ -1.83
HIPK3-204ENST00000525975 TMEM105Q8N8V8 129 aa3.65□□□□□ -1.83
HIPK3-204ENST00000525975 FAM57AQ8TBR7 257 aa3.65□□□□□ -1.83
HIPK3-204ENST00000525975 CFHR4Q92496 578 aa3.65□□□□□ -1.83
HIPK3-204ENST00000525975 UBE2WQ96B02 151 aa3.65□□□□□ -1.83
HIPK3-204ENST00000525975 CNFNQ9BYD5 112 aa3.65□□□□□ -1.83
HIPK3-204ENST00000525975 RAI1Q7Z5J4 1906 aaPredicted RBP3.64□□□□□ -1.83
HIPK3-204ENST00000525975 POLEQ07864 2286 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 IGHV3-35A0A0C4DH35 117 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 M0R381 172 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 IGHV3-23P01764 117 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 CFC1BP0CG36 223 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 CFC1P0CG37 223 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 SUMO2P61956 95 aaKnown RBP3.64□□□□□ -1.83
HIPK3-204ENST00000525975 TCF15Q12870 199 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 HES1Q14469 280 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 PAPPA-AS1Q5QFB9 102 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 PMS2CLQ68D20 193 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 Q6Q795 121 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 IL17RELQ6ZVW7 336 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 RNF223E7ERA6 249 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 MRPS12O15235 138 aaKnown RBP3.64□□□□□ -1.83
HIPK3-204ENST00000525975 FOXC1Q12948 553 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 ZNF56Q15929 161 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 ATP1A1-AS1Q5TC04 95 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 TEX36Q5VZQ5 186 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 GFRALQ6UXV0 394 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 SBSPONQ8IVN8 264 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 NRACQ8N912 160 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 NEXN-AS1Q8NBZ9 246 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 BAALCQ8WXS3 180 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 MDFIQ99750 246 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 SLC50A1Q9BRV3 221 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 TMEM126AQ9H061 195 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 CTSZQ9UBR2 303 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 SPENQ96T58 3664 aaKnown RBP3.64□□□□□ -1.83
HIPK3-204ENST00000525975 IGLV3-9A0A075B6K5 115 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 IGHV1-3A0A0C4DH29 117 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 A0A0J9YY99 117 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 TEX49A0A1B0GTD5 131 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 IGHV1-8P0DP01 117 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 RPL13AP40429 203 aaKnown RBP3.64□□□□□ -1.83
HIPK3-204ENST00000525975 SRSF2Q01130 221 aaKnown RBP3.64□□□□□ -1.83
HIPK3-204ENST00000525975 MRGPRG-AS1Q2M3A8 158 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 C2orf82Q6UX34 121 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 DYNAPQ8N1N2 210 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 RASL10AQ92737 203 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 TOMM6Q96B49 74 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 VPREB3Q9UKI3 123 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 SIT1Q9Y3P8 196 aa3.64□□□□□ -1.83
HIPK3-204ENST00000525975 EP300Q09472 2414 aaPredicted RBP3.63□□□□□ -1.83
HIPK3-204ENST00000525975 A4D1N5 150 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 BRI3O95415 125 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 CRIP2P52943 208 aaPredicted RBP3.63□□□□□ -1.83
HIPK3-204ENST00000525975 LINC01620Q4KN68 170 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 C21orf62Q9NYP8 219 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 DKK4Q9UBT3 224 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 CACNA1BQ00975 2339 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 M0QXV9 152 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 PRR30Q53SZ7 412 aaPredicted RBP3.63□□□□□ -1.83
HIPK3-204ENST00000525975 C9orf153Q5TBE3 101 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 LYPD2Q6UXB3 125 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 COX8CQ7Z4L0 72 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 RNF182Q8N6D2 247 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 C8orf31Q8N9H6 132 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 CHCHD5Q9BSY4 110 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 PPDPFQ9H3Y8 114 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 GPR179Q6PRD1 2367 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 IGKV3D-20A0A0C4DH25 116 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 C11orf86A6NJI1 115 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 COX6CP09669 75 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 LPAL2Q16609 132 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 Q6ZS46 218 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 ASCL5Q7RTU5 278 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 TMEM101Q96IK0 257 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 DYNLRB1Q9NP97 96 aa3.63□□□□□ -1.83
HIPK3-204ENST00000525975 RIF1Q5UIP0 2472 aaKnown RBP3.62□□□□□ -1.83
HIPK3-204ENST00000525975 IGHV3-30P01768 117 aa3.62□□□□□ -1.83
HIPK3-204ENST00000525975 IGHV3-30-5P0DP03 117 aa3.62□□□□□ -1.83
HIPK3-204ENST00000525975 MAFAQ8NHW3 353 aaPredicted RBP3.62□□□□□ -1.83
HIPK3-204ENST00000525975 DEFB104AQ8WTQ1 72 aa3.62□□□□□ -1.83
HIPK3-204ENST00000525975 RPL39LQ96EH5 51 aaKnown RBP3.62□□□□□ -1.83
HIPK3-204ENST00000525975 ZNF256Q9Y2P7 627 aaPredicted RBP3.62□□□□□ -1.83
HIPK3-204ENST00000525975 PHLDA3Q9Y5J5 127 aa3.62□□□□□ -1.83
HIPK3-204ENST00000525975 IGHV3OR16-13A0A075B7E8 117 aa3.62□□□□□ -1.83
HIPK3-204ENST00000525975 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.62□□□□□ -1.83
HIPK3-204ENST00000525975 IGHV3-74A0A0B4J1X5 117 aa3.62□□□□□ -1.83
HIPK3-204ENST00000525975 IGHV3-66A0A0C4DH42 116 aa3.62□□□□□ -1.83
HIPK3-204ENST00000525975 PRAC2D3DTV9 90 aa3.62□□□□□ -1.83
HIPK3-204ENST00000525975 J3QQQ9 107 aa3.62□□□□□ -1.83
HIPK3-204ENST00000525975 ZNF561-AS1K7EIQ3 104 aa3.62□□□□□ -1.83
HIPK3-204ENST00000525975 CRYGBP07316 175 aa3.62□□□□□ -1.83
HIPK3-204ENST00000525975 CD59P13987 128 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms