RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 KRTAP1-5Q9BYS1 174 aa12.79□□□□□ -0.36
CAPN1-203ENST00000525013 SDF2L1Q9HCN8 221 aa12.79□□□□□ -0.36
CAPN1-203ENST00000525013 IGHV3-16A0A0C4DH30 117 aa12.78□□□□□ -0.36
CAPN1-203ENST00000525013 MRPL23Q16540 153 aaKnown RBP12.78□□□□□ -0.36
CAPN1-203ENST00000525013 KCNS1Q96KK3 526 aa12.78□□□□□ -0.36
CAPN1-203ENST00000525013 EPDR1Q9UM22 224 aa12.78□□□□□ -0.36
CAPN1-203ENST00000525013 PSG8Q9UQ74 426 aa12.78□□□□□ -0.36
CAPN1-203ENST00000525013 GGTLC3B5MD39 225 aa12.77□□□□□ -0.37
CAPN1-203ENST00000525013 M0R2P5 195 aa12.77□□□□□ -0.37
CAPN1-203ENST00000525013 TYMSP04818 313 aa12.77□□□□□ -0.37
CAPN1-203ENST00000525013 MED14OSP0DP75 135 aa12.77□□□□□ -0.37
CAPN1-203ENST00000525013 PRNTQ86SH4 94 aa12.77□□□□□ -0.37
CAPN1-203ENST00000525013 ZNF575Q86XF7 245 aa12.77□□□□□ -0.37
CAPN1-203ENST00000525013 A0A1W2PPQ1 181 aa12.76□□□□□ -0.37
CAPN1-203ENST00000525013 ARPC5O15511 151 aa12.76□□□□□ -0.37
CAPN1-203ENST00000525013 GCGP01275 180 aa12.76□□□□□ -0.37
CAPN1-203ENST00000525013 FLI1Q01543 452 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-203ENST00000525013 CYB561D1Q8N8Q1 229 aa12.76□□□□□ -0.37
CAPN1-203ENST00000525013 OR4C5Q8NGB2 326 aa12.76□□□□□ -0.37
CAPN1-203ENST00000525013 PCNPQ8WW12 178 aaKnown RBP12.76□□□□□ -0.37
CAPN1-203ENST00000525013 DNAH11Q96DT5 4516 aa12.75□□□□□ -0.37
CAPN1-203ENST00000525013 CTXND1A0A1B0GTU2 59 aa12.75□□□□□ -0.37
CAPN1-203ENST00000525013 SIVA1O15304 175 aa12.75□□□□□ -0.37
CAPN1-203ENST00000525013 NXPH4O95158 308 aa12.75□□□□□ -0.37
CAPN1-203ENST00000525013 IFNA7P01567 189 aa12.75□□□□□ -0.37
CAPN1-203ENST00000525013 ZNF80P51504 273 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-203ENST00000525013 ZNF726P1Q15940 193 aa12.75□□□□□ -0.37
CAPN1-203ENST00000525013 ZFP69Q49AA0 526 aa12.75□□□□□ -0.37
CAPN1-203ENST00000525013 AKR1C8PQ5T2L2 129 aa12.75□□□□□ -0.37
CAPN1-203ENST00000525013 NEGR1Q7Z3B1 354 aa12.75□□□□□ -0.37
CAPN1-203ENST00000525013 DYNC1H1Q14204 4646 aaKnown RBP12.74□□□□□ -0.37
CAPN1-203ENST00000525013 TRAV4A0A0B4J268 109 aa12.74□□□□□ -0.37
CAPN1-203ENST00000525013 A0A1W2PRE2 83 aa12.74□□□□□ -0.37
CAPN1-203ENST00000525013 G3V3Q6 166 aa12.74□□□□□ -0.37
CAPN1-203ENST00000525013 TAAR5O14804 337 aa12.74□□□□□ -0.37
CAPN1-203ENST00000525013 IGLV2-11P01706 119 aa12.74□□□□□ -0.37
CAPN1-203ENST00000525013 GYPEP15421 78 aa12.74□□□□□ -0.37
CAPN1-203ENST00000525013 SRIP30626 198 aa12.74□□□□□ -0.37
CAPN1-203ENST00000525013 UBE2G2P60604 165 aa12.74□□□□□ -0.37
CAPN1-203ENST00000525013 SMUG1Q53HV7 270 aa12.74□□□□□ -0.37
CAPN1-203ENST00000525013 LYPD5Q6UWN5 251 aa12.74□□□□□ -0.37
CAPN1-203ENST00000525013 C9JCJ5 164 aa12.73□□□□□ -0.37
CAPN1-203ENST00000525013 SMLR1H3BR10 107 aa12.73□□□□□ -0.37
CAPN1-203ENST00000525013 K7EQD1 137 aa12.73□□□□□ -0.37
CAPN1-203ENST00000525013 FGF8P55075 233 aaPredicted RBP12.73□□□□□ -0.37
CAPN1-203ENST00000525013 TMEM75Q8N9X5 138 aa12.73□□□□□ -0.37
CAPN1-203ENST00000525013 C11orf21Q9P2W6 132 aa12.73□□□□□ -0.37
CAPN1-203ENST00000525013 TRAV34A0A0B4J273 112 aa12.72□□□□□ -0.37
CAPN1-203ENST00000525013 FBLL1A6NHQ2 334 aaKnown RBP12.72□□□□□ -0.37
CAPN1-203ENST00000525013 C16orf90A8MZG2 172 aa12.72□□□□□ -0.37
CAPN1-203ENST00000525013 ORM1P02763 201 aa12.72□□□□□ -0.37
CAPN1-203ENST00000525013 PFN1P07737 140 aaKnown RBP12.72□□□□□ -0.37
CAPN1-203ENST00000525013 SAPCD1Q5SSQ6 148 aa12.72□□□□□ -0.37
CAPN1-203ENST00000525013 LINC00479Q96M42 142 aa12.72□□□□□ -0.37
CAPN1-203ENST00000525013 PPT1P50897 306 aa12.71□□□□□ -0.37
CAPN1-203ENST00000525013 ZNF876PQ49A33 203 aa12.71□□□□□ -0.37
CAPN1-203ENST00000525013 CYTL1Q9NRR1 136 aa12.71□□□□□ -0.37
CAPN1-203ENST00000525013 TXNDC17Q9BRA2 123 aa12.7□□□□□ -0.38
CAPN1-203ENST00000525013 MAP1LC3B2A6NCE7 125 aa12.69□□□□□ -0.38
CAPN1-203ENST00000525013 PEX7O00628 323 aa12.69□□□□□ -0.38
CAPN1-203ENST00000525013 BTF3P20290 206 aaKnown RBP12.69□□□□□ -0.38
CAPN1-203ENST00000525013 LINC00315P59091 139 aa12.69□□□□□ -0.38
CAPN1-203ENST00000525013 NKX6-2Q9C056 277 aaPredicted RBP12.69□□□□□ -0.38
CAPN1-203ENST00000525013 MAP1LC3BQ9GZQ8 125 aa12.69□□□□□ -0.38
CAPN1-203ENST00000525013 ARL2-SNX15V9GYD0 113 aa12.69□□□□□ -0.38
CAPN1-203ENST00000525013 FAM74A7A6NL05 159 aa12.68□□□□□ -0.38
CAPN1-203ENST00000525013 NHLRC2Q8NBF2 726 aa12.68□□□□□ -0.38
CAPN1-203ENST00000525013 LOC100131303A0A0U1RQF7 123 aa12.67□□□□□ -0.38
CAPN1-203ENST00000525013 GATA1P15976 413 aaPredicted RBP12.67□□□□□ -0.38
CAPN1-203ENST00000525013 SPATA12Q7Z6I5 190 aa12.67□□□□□ -0.38
CAPN1-203ENST00000525013 STOML3Q8TAV4 291 aa12.67□□□□□ -0.38
CAPN1-203ENST00000525013 C9orf85Q96MD7 179 aa12.67□□□□□ -0.38
CAPN1-203ENST00000525013 TRAV9-2A0A087WT02 112 aa12.66□□□□□ -0.38
CAPN1-203ENST00000525013 IGHV3-73A0A0B4J1V6 119 aa12.66□□□□□ -0.38
CAPN1-203ENST00000525013 CFAP126Q5VTH2 177 aa12.66□□□□□ -0.38
CAPN1-203ENST00000525013 DPPA3Q6W0C5 159 aa12.66□□□□□ -0.38
CAPN1-203ENST00000525013 HIST1H2BAQ96A08 127 aa12.66□□□□□ -0.38
CAPN1-203ENST00000525013 KRTAP17-1Q9BYP8 105 aa12.66□□□□□ -0.38
CAPN1-203ENST00000525013 LY96Q9Y6Y9 160 aa12.66□□□□□ -0.38
CAPN1-203ENST00000525013 FABP5P3A8MUU1 101 aa12.65□□□□□ -0.38
CAPN1-203ENST00000525013 RS1O15537 224 aa12.65□□□□□ -0.38
CAPN1-203ENST00000525013 RNASE3P12724 160 aaKnown RBP12.65□□□□□ -0.38
CAPN1-203ENST00000525013 S100A4P26447 101 aaKnown RBP12.65□□□□□ -0.38
CAPN1-203ENST00000525013 FHITP49789 147 aa12.65□□□□□ -0.38
CAPN1-203ENST00000525013 ZNF506Q5JVG8 444 aa12.65□□□□□ -0.38
CAPN1-203ENST00000525013 CST9LP1Q5W188 147 aa12.65□□□□□ -0.38
CAPN1-203ENST00000525013 SH2D6Q7Z4S9 175 aa12.65□□□□□ -0.38
CAPN1-203ENST00000525013 Q86TA4 180 aa12.65□□□□□ -0.38
CAPN1-203ENST00000525013 WFDC10BQ8IUB3 73 aa12.65□□□□□ -0.38
CAPN1-203ENST00000525013 KCNRGQ8N5I3 272 aa12.65□□□□□ -0.38
CAPN1-203ENST00000525013 PGPEP1LA6NFU8 196 aa12.64□□□□□ -0.39
CAPN1-203ENST00000525013 ZNF345Q14585 488 aa12.64□□□□□ -0.39
CAPN1-203ENST00000525013 SLC25A29Q8N8R3 303 aa12.64□□□□□ -0.39
CAPN1-203ENST00000525013 TNFRSF18Q9Y5U5 241 aa12.64□□□□□ -0.39
CAPN1-203ENST00000525013 IGKV3D-20A0A0C4DH25 116 aa12.63□□□□□ -0.39
CAPN1-203ENST00000525013 CIDEAO60543 219 aa12.63□□□□□ -0.39
CAPN1-203ENST00000525013 EVI2AP22794 236 aa12.63□□□□□ -0.39
CAPN1-203ENST00000525013 UBE2G1P62253 170 aa12.63□□□□□ -0.39
CAPN1-203ENST00000525013 PRADC1Q9BSG0 188 aa12.63□□□□□ -0.39
CAPN1-203ENST00000525013 HMSDA8MTL9 139 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms