RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 TRAV8-2A0A0B4J237 113 aa3.92□□□□□ -1.78
NEDD8-203ENST00000524927 ERICH4A6NGS2 130 aa3.92□□□□□ -1.78
NEDD8-203ENST00000524927 TCRBP04435 133 aa3.92□□□□□ -1.78
NEDD8-203ENST00000524927 SFTA3P0C7M3 94 aa3.92□□□□□ -1.78
NEDD8-203ENST00000524927 COX4I1P13073 169 aa3.92□□□□□ -1.78
NEDD8-203ENST00000524927 GALR1P47211 349 aa3.92□□□□□ -1.78
NEDD8-203ENST00000524927 GTF2A1P52655 376 aaPredicted RBP3.92□□□□□ -1.78
NEDD8-203ENST00000524927 REG3AQ06141 175 aa3.92□□□□□ -1.78
NEDD8-203ENST00000524927 Q0VG73 95 aa3.92□□□□□ -1.78
NEDD8-203ENST00000524927 IDNKQ5T6J7 187 aa3.92□□□□□ -1.78
NEDD8-203ENST00000524927 CROCCP2Q86T23 111 aa3.92□□□□□ -1.78
NEDD8-203ENST00000524927 HS3ST5Q8IZT8 346 aa3.92□□□□□ -1.78
NEDD8-203ENST00000524927 RNF182Q8N6D2 247 aa3.92□□□□□ -1.78
NEDD8-203ENST00000524927 UBE2WQ96B02 151 aa3.92□□□□□ -1.78
NEDD8-203ENST00000524927 INS-IGF2F8WCM5 200 aa3.91□□□□□ -1.78
NEDD8-203ENST00000524927 KRASP01116 189 aa3.91□□□□□ -1.78
NEDD8-203ENST00000524927 OR10J4P0C629 311 aa3.91□□□□□ -1.78
NEDD8-203ENST00000524927 PTHLHP12272 177 aa3.91□□□□□ -1.78
NEDD8-203ENST00000524927 HSPE1P61604 102 aaKnown RBP3.91□□□□□ -1.78
NEDD8-203ENST00000524927 GUK1Q16774 197 aa3.91□□□□□ -1.78
NEDD8-203ENST00000524927 NIT1Q86X76 327 aa3.91□□□□□ -1.78
NEDD8-203ENST00000524927 MAFIPQ8WZ33 124 aa3.91□□□□□ -1.78
NEDD8-203ENST00000524927 ATP5SQ99766 215 aa3.91□□□□□ -1.78
NEDD8-203ENST00000524927 RSG1Q9BU20 258 aa3.91□□□□□ -1.78
NEDD8-203ENST00000524927 KLK12Q9UKR0 248 aa3.91□□□□□ -1.78
NEDD8-203ENST00000524927 TRAV12-3A0A0B4J271 114 aa3.9□□□□□ -1.79
NEDD8-203ENST00000524927 GNGT2O14610 69 aa3.9□□□□□ -1.79
NEDD8-203ENST00000524927 EIF3GO75821 320 aaKnown RBP eCLIP3.9□□□□□ -1.791e-7■■■■□ 19.4
NEDD8-203ENST00000524927 RNASE2P10153 161 aaKnown RBP3.9□□□□□ -1.79
NEDD8-203ENST00000524927 SLC25A4P12235 298 aa3.9□□□□□ -1.79
NEDD8-203ENST00000524927 HRH1P35367 487 aa3.9□□□□□ -1.79
NEDD8-203ENST00000524927 RND2P52198 227 aa3.9□□□□□ -1.79
NEDD8-203ENST00000524927 ARPC4P59998 168 aa3.9□□□□□ -1.79
NEDD8-203ENST00000524927 ELOBQ15370 118 aa3.9□□□□□ -1.79
NEDD8-203ENST00000524927 COA6Q5JTJ3 125 aaKnown RBP3.9□□□□□ -1.79
NEDD8-203ENST00000524927 PRSS54Q6PEW0 395 aa3.9□□□□□ -1.79
NEDD8-203ENST00000524927 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.9□□□□□ -1.79
NEDD8-203ENST00000524927 C10orf67Q8IYJ2 551 aa3.9□□□□□ -1.79
NEDD8-203ENST00000524927 EIF4E3Q8N5X7 224 aaKnown RBP3.9□□□□□ -1.79
NEDD8-203ENST00000524927 RETNLBQ9BQ08 111 aa3.9□□□□□ -1.79
NEDD8-203ENST00000524927 PBDC1Q9BVG4 233 aa3.9□□□□□ -1.79
NEDD8-203ENST00000524927 CARHSP1Q9Y2V2 147 aaKnown RBP3.9□□□□□ -1.79
NEDD8-203ENST00000524927 G6PCP35575 357 aa3.89□□□□□ -1.79
NEDD8-203ENST00000524927 RPS10P46783 165 aaKnown RBP3.89□□□□□ -1.79
NEDD8-203ENST00000524927 FGF8P55075 233 aaPredicted RBP3.89□□□□□ -1.79
NEDD8-203ENST00000524927 MAGOHP61326 146 aaKnown RBP3.89□□□□□ -1.79
NEDD8-203ENST00000524927 RPS11P62280 158 aaKnown RBP eCLIP3.89□□□□□ -1.79
NEDD8-203ENST00000524927 FLOT2Q14254 428 aa3.89□□□□□ -1.79
NEDD8-203ENST00000524927 KRTAP19-6Q3LI70 58 aa3.89□□□□□ -1.79
NEDD8-203ENST00000524927 LINC00337Q8N6G1 96 aa3.89□□□□□ -1.79
NEDD8-203ENST00000524927 SMIM19Q96E16 107 aa3.89□□□□□ -1.79
NEDD8-203ENST00000524927 GABARAPL3Q9BY60 117 aa3.89□□□□□ -1.79
NEDD8-203ENST00000524927 PEX7O00628 323 aa3.88□□□□□ -1.79
NEDD8-203ENST00000524927 HLA-DQA1P01909 254 aa3.88□□□□□ -1.79
NEDD8-203ENST00000524927 F2RP25116 425 aa3.88□□□□□ -1.79
NEDD8-203ENST00000524927 NMUP48645 174 aa3.88□□□□□ -1.79
NEDD8-203ENST00000524927 OR10A3P58181 314 aa3.88□□□□□ -1.79
NEDD8-203ENST00000524927 AADACL3Q5VUY0 350 aa3.88□□□□□ -1.79
NEDD8-203ENST00000524927 XAF1Q6GPH4 301 aa3.88□□□□□ -1.79
NEDD8-203ENST00000524927 CAMK2N1Q7Z7J9 78 aa3.88□□□□□ -1.79
NEDD8-203ENST00000524927 OR10P1Q8NGE3 313 aa3.88□□□□□ -1.79
NEDD8-203ENST00000524927 OR51H1Q8NH63 302 aa3.88□□□□□ -1.79
NEDD8-203ENST00000524927 GPR82Q96P67 336 aa3.88□□□□□ -1.79
NEDD8-203ENST00000524927 FGFR1OP2Q9NVK5 253 aa3.88□□□□□ -1.79
NEDD8-203ENST00000524927 FLGP20930 4061 aaPredicted RBP3.88□□□□□ -1.79
NEDD8-203ENST00000524927 TRAV4A0A0B4J268 109 aa3.87□□□□□ -1.79
NEDD8-203ENST00000524927 A0A0B4J2A0 478 aa3.87□□□□□ -1.79
NEDD8-203ENST00000524927 IGKV2-24A0A0C4DH68 120 aa3.87□□□□□ -1.79
NEDD8-203ENST00000524927 NDUFS6O75380 124 aaKnown RBP3.87□□□□□ -1.79
NEDD8-203ENST00000524927 CXCL3P19876 107 aa3.87□□□□□ -1.79
NEDD8-203ENST00000524927 PSMA1P25786 263 aaKnown RBP3.87□□□□□ -1.79
NEDD8-203ENST00000524927 TALDO1P37837 337 aa3.87□□□□□ -1.79
NEDD8-203ENST00000524927 LPAR6P43657 344 aa3.87□□□□□ -1.79
NEDD8-203ENST00000524927 CBX5P45973 191 aa3.87□□□□□ -1.79
NEDD8-203ENST00000524927 DAPP51397 102 aa3.87□□□□□ -1.79
NEDD8-203ENST00000524927 ZNF138P52744 262 aa3.87□□□□□ -1.79
NEDD8-203ENST00000524927 POLR2GP62487 172 aaKnown RBP eCLIP3.87□□□□□ -1.79
NEDD8-203ENST00000524927 COX6A2Q02221 97 aa3.87□□□□□ -1.79
NEDD8-203ENST00000524927 HSD17B12Q53GQ0 312 aa3.87□□□□□ -1.79
NEDD8-203ENST00000524927 HACD4Q5VWC8 232 aa3.87□□□□□ -1.79
NEDD8-203ENST00000524927 KRTAP11-1Q8IUC1 163 aa3.87□□□□□ -1.79
NEDD8-203ENST00000524927 ZNF431Q8TF32 576 aaPredicted RBP3.87□□□□□ -1.79
NEDD8-203ENST00000524927 CHCHD7Q9BUK0 85 aa3.87□□□□□ -1.79
NEDD8-203ENST00000524927 PARD6GQ9BYG4 376 aaPredicted RBP3.87□□□□□ -1.79
NEDD8-203ENST00000524927 TMEM222Q9H0R3 208 aa3.87□□□□□ -1.79
NEDD8-203ENST00000524927 ZNF331Q9NQX6 463 aaPredicted RBP3.87□□□□□ -1.79
NEDD8-203ENST00000524927 SHPKQ9UHJ6 478 aa3.87□□□□□ -1.79
NEDD8-203ENST00000524927 TMEM56-RWDD3S4R434 201 aa3.87□□□□□ -1.79
NEDD8-203ENST00000524927 A0A087WWC5 75 aa3.86□□□□□ -1.79
NEDD8-203ENST00000524927 BSXQ3C1V8 233 aa3.86□□□□□ -1.79
NEDD8-203ENST00000524927 HSP90B2PQ58FF3 399 aa3.86□□□□□ -1.79
NEDD8-203ENST00000524927 Q6ZQT7 251 aa3.86□□□□□ -1.79
NEDD8-203ENST00000524927 SLC35G3Q8N808 338 aa3.86□□□□□ -1.79
NEDD8-203ENST00000524927 BPIFCQ8NFQ6 507 aa3.86□□□□□ -1.79
NEDD8-203ENST00000524927 SUN5Q8TC36 379 aa3.86□□□□□ -1.79
NEDD8-203ENST00000524927 ODF3Q96PU9 254 aa3.86□□□□□ -1.79
NEDD8-203ENST00000524927 PRADC1Q9BSG0 188 aa3.86□□□□□ -1.79
NEDD8-203ENST00000524927 C8orf4Q9NR00 106 aa3.86□□□□□ -1.79
NEDD8-203ENST00000524927 LINC00474Q9P2X8 69 aa3.86□□□□□ -1.79
NEDD8-203ENST00000524927 PGPA6NDG6 321 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms