RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 SAA4P35542 130 aa5.84□□□□□ -1.47
HDAC3-216ENST00000523088 UBE2L3P68036 154 aaKnown RBP5.84□□□□□ -1.47
HDAC3-216ENST00000523088 CFHR3Q02985 330 aa5.84□□□□□ -1.47
HDAC3-216ENST00000523088 ZC2HC1BQ5TFG8 222 aa5.84□□□□□ -1.47
HDAC3-216ENST00000523088 PCP2Q8IVA1 136 aa5.84□□□□□ -1.47
HDAC3-216ENST00000523088 ZNF524Q96C55 264 aa5.84□□□□□ -1.47
HDAC3-216ENST00000523088 ZNF799Q96GE5 643 aa5.84□□□□□ -1.47
HDAC3-216ENST00000523088 U3KQE9 123 aa5.84□□□□□ -1.47
HDAC3-216ENST00000523088 JMJD1CQ15652 2540 aa5.84□□□□□ -1.47
HDAC3-216ENST00000523088 M0R129 80 aa5.83□□□□□ -1.48
HDAC3-216ENST00000523088 ATP5EP56381 51 aaPredicted RBP5.83□□□□□ -1.48
HDAC3-216ENST00000523088 HIST1H4AP62805 103 aaKnown RBP5.83□□□□□ -1.48
HDAC3-216ENST00000523088 SERF2P84101 59 aa5.83□□□□□ -1.48
HDAC3-216ENST00000523088 ECSCRQ19T08 205 aa5.83□□□□□ -1.48
HDAC3-216ENST00000523088 LGALS9CQ6DKI2 356 aa5.83□□□□□ -1.48
HDAC3-216ENST00000523088 C11orf71Q6IPW1 123 aa5.83□□□□□ -1.48
HDAC3-216ENST00000523088 C6orf201Q7Z4U5 140 aa5.83□□□□□ -1.48
HDAC3-216ENST00000523088 C3orf56Q8N813 242 aa5.83□□□□□ -1.48
HDAC3-216ENST00000523088 GNG13Q9P2W3 67 aa5.83□□□□□ -1.48
HDAC3-216ENST00000523088 HILPDAQ9Y5L2 63 aa5.83□□□□□ -1.48
HDAC3-216ENST00000523088 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.83□□□□□ -1.481e-6■■■■□ 22.8
HDAC3-216ENST00000523088 ZANQ9Y493 2812 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 ALPK2Q86TB3 2170 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 SONP18583 2426 aaKnown RBP5.82□□□□□ -1.48
HDAC3-216ENST00000523088 A0A1B0GWA3 101 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 SNURFLB1AK76 121 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 C8orf87E5RJ46 101 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 E7EQL1 145 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 TIMM23O14925 209 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 NDUFB3O43676 98 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 IGKV3-15P01624 115 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 IGHV4-39P01824 125 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 TCRAP04437 139 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 EFNA4P52798 201 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 RPL30P62888 115 aaKnown RBP5.82□□□□□ -1.48
HDAC3-216ENST00000523088 MLANAQ16655 118 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 TMEM170BQ5T4T1 132 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 KTN1-AS1Q86SY8 53 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 SLC22A24Q8N4F4 322 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 SERP2Q8N6R1 65 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 NUP37Q8NFH4 326 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 LRRC29Q8WV35 223 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 TMEM158Q8WZ71 300 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 FAM168AQ92567 244 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 DSCR8Q96T75 97 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 TRGV9Q99603 122 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 SMR3AQ99954 134 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 UPK3BQ9BT76 320 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 PAXXQ9BUH6 204 aa5.82□□□□□ -1.48
HDAC3-216ENST00000523088 F11RQ9Y624 299 aaKnown RBP5.82□□□□□ -1.48
HDAC3-216ENST00000523088 CEBPZOSA8MTT3 80 aa5.81□□□□□ -1.48
HDAC3-216ENST00000523088 INAFM1C9JVW0 142 aa5.81□□□□□ -1.48
HDAC3-216ENST00000523088 RNF223E7ERA6 249 aa5.81□□□□□ -1.48
HDAC3-216ENST00000523088 F2Z2F3 143 aa5.81□□□□□ -1.48
HDAC3-216ENST00000523088 IGLV1-44P01699 117 aa5.81□□□□□ -1.48
HDAC3-216ENST00000523088 RSPO1Q2MKA7 263 aaPredicted RBP5.81□□□□□ -1.48
HDAC3-216ENST00000523088 DEFB121Q5J5C9 76 aa5.81□□□□□ -1.48
HDAC3-216ENST00000523088 ZNF627Q7L945 461 aa5.81□□□□□ -1.48
HDAC3-216ENST00000523088 C5orf38Q86SI9 138 aa5.81□□□□□ -1.48
HDAC3-216ENST00000523088 ZNF503Q96F45 646 aa5.81□□□□□ -1.48
HDAC3-216ENST00000523088 ZNF286AQ9HBT8 521 aa5.81□□□□□ -1.48
HDAC3-216ENST00000523088 HHLA3Q9XRX5 114 aa5.81□□□□□ -1.48
HDAC3-216ENST00000523088 TRGV11A0A075B6L2 103 aa5.8□□□□□ -1.48
HDAC3-216ENST00000523088 IGHV1-18A0A0C4DH31 117 aa5.8□□□□□ -1.48
HDAC3-216ENST00000523088 WI2-2373I1.2A0A1W2PRP0 233 aa5.8□□□□□ -1.48
HDAC3-216ENST00000523088 hADV29S1A0JD25 119 aa5.8□□□□□ -1.48
HDAC3-216ENST00000523088 BMPR1BO00238 502 aa5.8□□□□□ -1.48
HDAC3-216ENST00000523088 UPK2O00526 184 aa5.8□□□□□ -1.48
HDAC3-216ENST00000523088 LEPROTL1O95214 131 aa5.8□□□□□ -1.48
HDAC3-216ENST00000523088 PAX8Q06710 450 aa5.8□□□□□ -1.48
HDAC3-216ENST00000523088 INSL4Q14641 139 aa5.8□□□□□ -1.48
HDAC3-216ENST00000523088 LINC00643Q86TS7 51 aa5.8□□□□□ -1.48
HDAC3-216ENST00000523088 BCL6BQ8N143 479 aaPredicted RBP5.8□□□□□ -1.48
HDAC3-216ENST00000523088 SLC25A2Q9BXI2 301 aa5.8□□□□□ -1.48
HDAC3-216ENST00000523088 CKLFQ9UBR5 152 aa5.8□□□□□ -1.48
HDAC3-216ENST00000523088 IGKV1D-42A0A075B6H8 117 aa5.79□□□□□ -1.48
HDAC3-216ENST00000523088 TRAV8-1A0A0A6YYK1 113 aa5.79□□□□□ -1.48
HDAC3-216ENST00000523088 UBE2L5PA0A1B0GUS4 154 aa5.79□□□□□ -1.48
HDAC3-216ENST00000523088 A0A1B0GXF2 115 aa5.79□□□□□ -1.48
HDAC3-216ENST00000523088 J3QT63 122 aa5.79□□□□□ -1.48
HDAC3-216ENST00000523088 CCL24O00175 119 aa5.79□□□□□ -1.48
HDAC3-216ENST00000523088 GHRHP01286 108 aa5.79□□□□□ -1.48
HDAC3-216ENST00000523088 UBE2D3P61077 147 aa5.79□□□□□ -1.48
HDAC3-216ENST00000523088 ERVK-16P61578 105 aa5.79□□□□□ -1.48
HDAC3-216ENST00000523088 UBE2D2P62837 147 aa5.79□□□□□ -1.48
HDAC3-216ENST00000523088 TREML4Q6UXN2 200 aa5.79□□□□□ -1.48
HDAC3-216ENST00000523088 C9orf139Q6ZV77 190 aa5.79□□□□□ -1.48
HDAC3-216ENST00000523088 WDR86Q86TI4 376 aa5.79□□□□□ -1.48
HDAC3-216ENST00000523088 OR5C1Q8NGR4 320 aa5.79□□□□□ -1.48
HDAC3-216ENST00000523088 C10orf105Q8TEF2 133 aa5.79□□□□□ -1.48
HDAC3-216ENST00000523088 TMEM190Q8WZ59 177 aa5.79□□□□□ -1.48
HDAC3-216ENST00000523088 DYNLRB1Q9NP97 96 aa5.79□□□□□ -1.48
HDAC3-216ENST00000523088 IL36RNQ9UBH0 155 aa5.79□□□□□ -1.48
HDAC3-216ENST00000523088 MALRD1Q5VYJ5 2156 aa5.79□□□□□ -1.48
HDAC3-216ENST00000523088 IGHV4-30-2A0A087WSY4 118 aa5.78□□□□□ -1.48
HDAC3-216ENST00000523088 A0A0A0MQY5 61 aa5.78□□□□□ -1.48
HDAC3-216ENST00000523088 TCRBV4S1A1TA0A5B7 111 aa5.78□□□□□ -1.48
HDAC3-216ENST00000523088 PGPA6NDG6 321 aa5.78□□□□□ -1.48
HDAC3-216ENST00000523088 NGFP01138 241 aa5.78□□□□□ -1.48
HDAC3-216ENST00000523088 NPYP01303 97 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms