RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 LINC01619G3V211 115 aa19.4■□□□□ 0.7
COL13A1-214ENST00000522165 ZNF688P0C7X2 276 aa19.4■□□□□ 0.7
COL13A1-214ENST00000522165 RNASE4P34096 147 aaKnown RBP19.4■□□□□ 0.7
COL13A1-214ENST00000522165 EBLN2Q6P2I7 272 aa19.4■□□□□ 0.7
COL13A1-214ENST00000522165 KIR3DS1Q14943 382 aa19.4■□□□□ 0.7
COL13A1-214ENST00000522165 ADAMTSL5Q6ZMM2 481 aa19.4■□□□□ 0.7
COL13A1-214ENST00000522165 RAB4AP20338 218 aa19.39■□□□□ 0.69
COL13A1-214ENST00000522165 SNRPD3P62318 126 aaKnown RBP19.39■□□□□ 0.69
COL13A1-214ENST00000522165 PSMG4Q5JS54 123 aa19.39■□□□□ 0.69
COL13A1-214ENST00000522165 CKS2P33552 79 aa19.39■□□□□ 0.69
COL13A1-214ENST00000522165 TDRG1Q3Y452 100 aa19.39■□□□□ 0.69
COL13A1-214ENST00000522165 OR11H1Q8NG94 326 aa19.39■□□□□ 0.69
COL13A1-214ENST00000522165 IGHV4-4A0A075B6R2 117 aa19.38■□□□□ 0.69
COL13A1-214ENST00000522165 PRSS3P2Q8NHM4 247 aa19.38■□□□□ 0.69
COL13A1-214ENST00000522165 KIR2DL5BA0A0G2JN68 375 aa19.37■□□□□ 0.69
COL13A1-214ENST00000522165 KIR2DL5BA0A0G2JPC4 375 aa19.37■□□□□ 0.69
COL13A1-214ENST00000522165 KLLNB2CW77 178 aa19.37■□□□□ 0.69
COL13A1-214ENST00000522165 KHDC1LQ5JSQ8 128 aa19.37■□□□□ 0.69
COL13A1-214ENST00000522165 KIR2DL5AQ8N109 375 aa19.37■□□□□ 0.69
COL13A1-214ENST00000522165 AP5S1Q9NUS5 200 aa19.37■□□□□ 0.69
COL13A1-214ENST00000522165 SMKR1H3BMG3 65 aa19.37■□□□□ 0.69
COL13A1-214ENST00000522165 H3BVH4 76 aa19.37■□□□□ 0.69
COL13A1-214ENST00000522165 CACNG7P62955 275 aa19.37■□□□□ 0.69
COL13A1-214ENST00000522165 OR1N2Q8NGR9 330 aa19.37■□□□□ 0.69
COL13A1-214ENST00000522165 BTF3P20290 206 aaKnown RBP19.36■□□□□ 0.69
COL13A1-214ENST00000522165 ANXA2RQ3ZCQ2 193 aa19.36■□□□□ 0.69
COL13A1-214ENST00000522165 FA2HQ7L5A8 372 aa19.36■□□□□ 0.69
COL13A1-214ENST00000522165 DPF1Q92782 380 aa19.36■□□□□ 0.69
COL13A1-214ENST00000522165 SIGLEC8Q9NYZ4 499 aa19.36■□□□□ 0.69
COL13A1-214ENST00000522165 ACANP16112 2415 aa19.36■□□□□ 0.69
COL13A1-214ENST00000522165 IFI27P40305 119 aaPredicted RBP19.36■□□□□ 0.69
COL13A1-214ENST00000522165 GCN1Q92616 2671 aaKnown RBP19.35■□□□□ 0.69
COL13A1-214ENST00000522165 NCR2O95944 276 aa19.35■□□□□ 0.69
COL13A1-214ENST00000522165 KLHL30-AS1Q8NEE0 82 aa19.35■□□□□ 0.69
COL13A1-214ENST00000522165 A0A0J9YX75 114 aa19.34■□□□□ 0.69
COL13A1-214ENST00000522165 LEPROTL1O95214 131 aa19.34■□□□□ 0.69
COL13A1-214ENST00000522165 NPYP01303 97 aa19.34■□□□□ 0.69
COL13A1-214ENST00000522165 PPBPP02775 128 aa19.34■□□□□ 0.69
COL13A1-214ENST00000522165 SPANXN1Q5VSR9 72 aa19.34■□□□□ 0.69
COL13A1-214ENST00000522165 DUX3Q96PT4 197 aa19.34■□□□□ 0.69
COL13A1-214ENST00000522165 VAMP8Q9BV40 100 aa19.34■□□□□ 0.69
COL13A1-214ENST00000522165 LOC389332A0A1B0GUA5 103 aa19.34■□□□□ 0.69
COL13A1-214ENST00000522165 ODF3Q96PU9 254 aa19.34■□□□□ 0.69
COL13A1-214ENST00000522165 ANK3Q12955 4377 aaKnown RBP19.34■□□□□ 0.69
COL13A1-214ENST00000522165 EVI2AP22794 236 aa19.33■□□□□ 0.69
COL13A1-214ENST00000522165 ASIPP42127 132 aa19.33■□□□□ 0.69
COL13A1-214ENST00000522165 DEFA6Q01524 100 aa19.32■□□□□ 0.68
COL13A1-214ENST00000522165 LINC00173Q6ZV60 143 aa19.32■□□□□ 0.68
COL13A1-214ENST00000522165 OR9G4Q8NGQ1 327 aa19.32■□□□□ 0.68
COL13A1-214ENST00000522165 PEMTQ9UBM1 199 aa19.32■□□□□ 0.68
COL13A1-214ENST00000522165 SMIM15Q7Z3B0 74 aa19.32■□□□□ 0.68
COL13A1-214ENST00000522165 TMEM70Q9BUB7 260 aa19.32■□□□□ 0.68
COL13A1-214ENST00000522165 HIST2H2BDQ6DRA6 164 aa19.31■□□□□ 0.68
COL13A1-214ENST00000522165 WFDC12Q8WWY7 111 aa19.31■□□□□ 0.68
COL13A1-214ENST00000522165 PAM16Q9Y3D7 125 aa19.31■□□□□ 0.68
COL13A1-214ENST00000522165 TIMM8BQ9Y5J9 83 aaPredicted RBP19.31■□□□□ 0.68
COL13A1-214ENST00000522165 TCF21O43680 179 aa19.31■□□□□ 0.68
COL13A1-214ENST00000522165 MED14OSP0DP75 135 aa19.31■□□□□ 0.68
COL13A1-214ENST00000522165 S100A4P26447 101 aaKnown RBP19.31■□□□□ 0.68
COL13A1-214ENST00000522165 C20orf144Q9BQM9 153 aa19.31■□□□□ 0.68
COL13A1-214ENST00000522165 LAMTOR2Q9Y2Q5 125 aa19.31■□□□□ 0.68
COL13A1-214ENST00000522165 GAS8-AS1O95177 125 aa19.3■□□□□ 0.68
COL13A1-214ENST00000522165 RNASE1P07998 156 aaKnown RBP19.3■□□□□ 0.68
COL13A1-214ENST00000522165 LEPP41159 167 aa19.3■□□□□ 0.68
COL13A1-214ENST00000522165 DLX4Q92988 240 aaPredicted RBP19.3■□□□□ 0.68
COL13A1-214ENST00000522165 GNRH2O43555 120 aa19.29■□□□□ 0.68
COL13A1-214ENST00000522165 SCRT2Q9NQ03 307 aa19.29■□□□□ 0.68
COL13A1-214ENST00000522165 CRXO43186 299 aaPredicted RBP19.29■□□□□ 0.68
COL13A1-214ENST00000522165 SCGB2A2Q13296 93 aa19.29■□□□□ 0.68
COL13A1-214ENST00000522165 C14orf144Q96I85 54 aa19.29■□□□□ 0.68
COL13A1-214ENST00000522165 FASNP49327 2511 aaKnown RBP19.28■□□□□ 0.68
COL13A1-214ENST00000522165 SPATA12Q7Z6I5 190 aa19.28■□□□□ 0.68
COL13A1-214ENST00000522165 HSPB8Q9UJY1 196 aa19.28■□□□□ 0.68
COL13A1-214ENST00000522165 NDUFAF3Q9BU61 184 aa19.28■□□□□ 0.68
COL13A1-214ENST00000522165 C7orf71A4D174 169 aa19.27■□□□□ 0.68
COL13A1-214ENST00000522165 SYS1-DBNDD2H3BUS1 97 aa19.27■□□□□ 0.68
COL13A1-214ENST00000522165 FOXI2Q6ZQN5 318 aa19.27■□□□□ 0.68
COL13A1-214ENST00000522165 MAP1LC3AQ9H492 121 aa19.27■□□□□ 0.68
COL13A1-214ENST00000522165 DUSP14O95147 198 aaKnown RBP19.26■□□□□ 0.67
COL13A1-214ENST00000522165 TNFRSF6BO95407 300 aa19.26■□□□□ 0.67
COL13A1-214ENST00000522165 RNASE3P12724 160 aaKnown RBP19.26■□□□□ 0.67
COL13A1-214ENST00000522165 TMEM160Q9NX00 188 aa19.26■□□□□ 0.67
COL13A1-214ENST00000522165 PHLDA3Q9Y5J5 127 aa19.26■□□□□ 0.67
COL13A1-214ENST00000522165 IGKV3-20P01619 116 aa19.26■□□□□ 0.67
COL13A1-214ENST00000522165 C16orf95Q9H693 158 aa19.26■□□□□ 0.67
COL13A1-214ENST00000522165 A0A096LNJ9 63 aa19.25■□□□□ 0.67
COL13A1-214ENST00000522165 TRAV12-3A0A0B4J271 114 aa19.25■□□□□ 0.67
COL13A1-214ENST00000522165 M0R381 172 aa19.25■□□□□ 0.67
COL13A1-214ENST00000522165 SPRY2O43597 315 aa19.25■□□□□ 0.67
COL13A1-214ENST00000522165 GATA1P15976 413 aaPredicted RBP19.25■□□□□ 0.67
COL13A1-214ENST00000522165 FAM159AQ6UWV7 190 aa19.25■□□□□ 0.67
COL13A1-214ENST00000522165 NF1P21359 2839 aa19.25■□□□□ 0.67
COL13A1-214ENST00000522165 TRAV2A0A0B4J234 112 aa19.24■□□□□ 0.67
COL13A1-214ENST00000522165 RAX2Q96IS3 184 aa19.24■□□□□ 0.67
COL13A1-214ENST00000522165 MAP1LC3CQ9BXW4 147 aa19.24■□□□□ 0.67
COL13A1-214ENST00000522165 CD28P10747 220 aa19.24■□□□□ 0.67
COL13A1-214ENST00000522165 ATOH7Q8N100 152 aa19.24■□□□□ 0.67
COL13A1-214ENST00000522165 TMEM61Q8N0U2 210 aa19.23■□□□□ 0.67
COL13A1-214ENST00000522165 C11orf44Q8N8P7 122 aa19.23■□□□□ 0.67
COL13A1-214ENST00000522165 LINC01006Q8NI28 216 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms