RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 C11orf21Q9P2W6 132 aa12.91□□□□□ -0.34
VEGFA-222ENST00000520948 NDUFS6O75380 124 aaKnown RBP12.9□□□□□ -0.34
VEGFA-222ENST00000520948 RPL35P42766 123 aaKnown RBP12.9□□□□□ -0.34
VEGFA-222ENST00000520948 IFITM2Q01629 132 aa12.9□□□□□ -0.34
VEGFA-222ENST00000520948 MUC21Q5SSG8 566 aa12.9□□□□□ -0.34
VEGFA-222ENST00000520948 ZC2HC1AQ96GY0 325 aa12.9□□□□□ -0.34
VEGFA-222ENST00000520948 TIMM8BQ9Y5J9 83 aaPredicted RBP12.9□□□□□ -0.34
VEGFA-222ENST00000520948 TEX48A0A1B0GUV7 120 aa12.89□□□□□ -0.35
VEGFA-222ENST00000520948 CBY3A6NI87 242 aa12.89□□□□□ -0.35
VEGFA-222ENST00000520948 LYRM9A8MSI8 78 aa12.89□□□□□ -0.35
VEGFA-222ENST00000520948 FABP5P3A8MUU1 101 aa12.89□□□□□ -0.35
VEGFA-222ENST00000520948 IBA57Q5T440 356 aaKnown RBP12.89□□□□□ -0.35
VEGFA-222ENST00000520948 LGALS9CQ6DKI2 356 aa12.89□□□□□ -0.35
VEGFA-222ENST00000520948 FAM159AQ6UWV7 190 aa12.89□□□□□ -0.35
VEGFA-222ENST00000520948 DNAH10Q8IVF4 4471 aa12.88□□□□□ -0.35
VEGFA-222ENST00000520948 DAZ2Q13117 558 aaKnown RBP12.88□□□□□ -0.35
VEGFA-222ENST00000520948 ZNF674Q2M3X9 581 aa12.88□□□□□ -0.35
VEGFA-222ENST00000520948 BAGE2Q86Y30 109 aa12.88□□□□□ -0.35
VEGFA-222ENST00000520948 LINC00612Q8N6U2 182 aa12.88□□□□□ -0.35
VEGFA-222ENST00000520948 MED9Q9NWA0 146 aa12.88□□□□□ -0.35
VEGFA-222ENST00000520948 TMEM250H0YL14 139 aa12.87□□□□□ -0.35
VEGFA-222ENST00000520948 GNRH2O43555 120 aa12.87□□□□□ -0.35
VEGFA-222ENST00000520948 IGLV2-8P01709 118 aa12.87□□□□□ -0.35
VEGFA-222ENST00000520948 TCL1AP56279 114 aa12.87□□□□□ -0.35
VEGFA-222ENST00000520948 KCNS1Q96KK3 526 aa12.87□□□□□ -0.35
VEGFA-222ENST00000520948 NOP10Q9NPE3 64 aaKnown RBP12.87□□□□□ -0.35
VEGFA-222ENST00000520948 GSN-AS1Q9NRJ2 163 aa12.87□□□□□ -0.35
VEGFA-222ENST00000520948 MDFICQ9P1T7 246 aa12.87□□□□□ -0.35
VEGFA-222ENST00000520948 HERC2O95714 4834 aa12.87□□□□□ -0.35
VEGFA-222ENST00000520948 RAB19A4D1S5 217 aa12.86□□□□□ -0.35
VEGFA-222ENST00000520948 TOR2AQ5JU69 321 aa12.86□□□□□ -0.35
VEGFA-222ENST00000520948 Q6ZTC4 211 aa12.86□□□□□ -0.35
VEGFA-222ENST00000520948 ZNF575Q86XF7 245 aa12.86□□□□□ -0.35
VEGFA-222ENST00000520948 NHLRC2Q8NBF2 726 aa12.86□□□□□ -0.35
VEGFA-222ENST00000520948 TRBV20OR9-2A0A075B6H5 130 aa12.85□□□□□ -0.35
VEGFA-222ENST00000520948 TRGV11A0A075B6L2 103 aa12.85□□□□□ -0.35
VEGFA-222ENST00000520948 IGKV3D-20A0A0C4DH25 116 aa12.85□□□□□ -0.35
VEGFA-222ENST00000520948 SNURFLB1AK76 121 aa12.85□□□□□ -0.35
VEGFA-222ENST00000520948 TYMSP04818 313 aa12.85□□□□□ -0.35
VEGFA-222ENST00000520948 ZNF767PQ75MW2 155 aa12.85□□□□□ -0.35
VEGFA-222ENST00000520948 EIF5A2Q9GZV4 153 aaKnown RBP12.85□□□□□ -0.35
VEGFA-222ENST00000520948 IGHV3-16A0A0C4DH30 117 aa12.84□□□□□ -0.35
VEGFA-222ENST00000520948 SH2D1AO60880 128 aa12.84□□□□□ -0.35
VEGFA-222ENST00000520948 SRP19P09132 144 aaKnown RBP12.84□□□□□ -0.35
VEGFA-222ENST00000520948 FAM162BQ5T6X4 162 aa12.84□□□□□ -0.35
VEGFA-222ENST00000520948 SMIM12Q96EX1 92 aa12.84□□□□□ -0.35
VEGFA-222ENST00000520948 SDF2L1Q9HCN8 221 aa12.84□□□□□ -0.35
VEGFA-222ENST00000520948 NAGKQ9UJ70 344 aa12.84□□□□□ -0.35
VEGFA-222ENST00000520948 SPINK4O60575 86 aa12.83□□□□□ -0.36
VEGFA-222ENST00000520948 DAD1P61803 113 aa12.83□□□□□ -0.36
VEGFA-222ENST00000520948 ZNF415Q09FC8 603 aa12.83□□□□□ -0.36
VEGFA-222ENST00000520948 CENPWQ5EE01 88 aa12.83□□□□□ -0.36
VEGFA-222ENST00000520948 KRBOX1C9JBD0 128 aa12.82□□□□□ -0.36
VEGFA-222ENST00000520948 DNLZQ5SXM8 178 aa12.82□□□□□ -0.36
VEGFA-222ENST00000520948 SPXQ9BT56 116 aa12.82□□□□□ -0.36
VEGFA-222ENST00000520948 PARLQ9H300 379 aa12.82□□□□□ -0.36
VEGFA-222ENST00000520948 TRAV10A0A0B4J240 114 aa12.81□□□□□ -0.36
VEGFA-222ENST00000520948 C9JCJ5 164 aa12.81□□□□□ -0.36
VEGFA-222ENST00000520948 DEFB130BP0DP73 79 aa12.81□□□□□ -0.36
VEGFA-222ENST00000520948 DEFB130AP0DP74 79 aa12.81□□□□□ -0.36
VEGFA-222ENST00000520948 GNG4P50150 75 aa12.81□□□□□ -0.36
VEGFA-222ENST00000520948 SRSF3P84103 164 aaKnown RBP12.81□□□□□ -0.36
VEGFA-222ENST00000520948 LGALS9BQ3B8N2 356 aa12.81□□□□□ -0.36
VEGFA-222ENST00000520948 LINC01559Q495D7 138 aa12.81□□□□□ -0.36
VEGFA-222ENST00000520948 CLLU1Q5K131 121 aa12.81□□□□□ -0.36
VEGFA-222ENST00000520948 Q6ZTI0 123 aa12.81□□□□□ -0.36
VEGFA-222ENST00000520948 C18orf15Q96N68 181 aa12.81□□□□□ -0.36
VEGFA-222ENST00000520948 VPS13DQ5THJ4 4388 aa12.8□□□□□ -0.36
VEGFA-222ENST00000520948 PGPEP1LA6NFU8 196 aa12.8□□□□□ -0.36
VEGFA-222ENST00000520948 C9JQL5 133 aa12.8□□□□□ -0.36
VEGFA-222ENST00000520948 ORM1P02763 201 aa12.8□□□□□ -0.36
VEGFA-222ENST00000520948 RNASE3P12724 160 aaKnown RBP12.8□□□□□ -0.36
VEGFA-222ENST00000520948 RAB14P61106 215 aa12.8□□□□□ -0.36
VEGFA-222ENST00000520948 C9orf85Q96MD7 179 aa12.8□□□□□ -0.36
VEGFA-222ENST00000520948 SMDT1Q9H4I9 107 aa12.8□□□□□ -0.36
VEGFA-222ENST00000520948 HECTD4Q9Y4D8 3996 aa12.79□□□□□ -0.36
VEGFA-222ENST00000520948 B4DEV8 164 aa12.79□□□□□ -0.36
VEGFA-222ENST00000520948 OCC1Q8TAD7 63 aa12.79□□□□□ -0.36
VEGFA-222ENST00000520948 RASL10AQ92737 203 aa12.79□□□□□ -0.36
VEGFA-222ENST00000520948 DEFB131BA0A096LNP1 70 aa12.78□□□□□ -0.36
VEGFA-222ENST00000520948 GAGE12BA1L429 117 aa12.78□□□□□ -0.36
VEGFA-222ENST00000520948 C19orf71A6NCJ1 209 aa12.78□□□□□ -0.36
VEGFA-222ENST00000520948 IGLL5B9A064 214 aa12.78□□□□□ -0.36
VEGFA-222ENST00000520948 GAGE7O76087 117 aa12.78□□□□□ -0.36
VEGFA-222ENST00000520948 GAGE12FP0CL80 117 aa12.78□□□□□ -0.36
VEGFA-222ENST00000520948 GAGE12GP0CL81 117 aa12.78□□□□□ -0.36
VEGFA-222ENST00000520948 GAGE12IP0CL82 117 aa12.78□□□□□ -0.36
VEGFA-222ENST00000520948 TRGV1A0A0A0MS02 117 aa12.77□□□□□ -0.37
VEGFA-222ENST00000520948 M0R036 132 aa12.77□□□□□ -0.37
VEGFA-222ENST00000520948 PEA15Q15121 130 aa12.77□□□□□ -0.37
VEGFA-222ENST00000520948 PRR27Q6MZM9 219 aa12.77□□□□□ -0.37
VEGFA-222ENST00000520948 PTH2Q96A98 100 aa12.77□□□□□ -0.37
VEGFA-222ENST00000520948 MRPL16Q9NX20 251 aaKnown RBP12.77□□□□□ -0.37
VEGFA-222ENST00000520948 LY96Q9Y6Y9 160 aa12.77□□□□□ -0.37
VEGFA-222ENST00000520948 MUC4Q99102 2169 aa12.76□□□□□ -0.37
VEGFA-222ENST00000520948 K7EN84 100 aa12.76□□□□□ -0.37
VEGFA-222ENST00000520948 M0R2P5 195 aa12.76□□□□□ -0.37
VEGFA-222ENST00000520948 ATP5G1P05496 136 aa12.76□□□□□ -0.37
VEGFA-222ENST00000520948 MGST1P10620 155 aaKnown RBP12.76□□□□□ -0.37
VEGFA-222ENST00000520948 IL36BQ9NZH7 164 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms