RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 Q6ZR03 302 aa9.75□□□□□ -0.85
PCDHGA6-201ENST00000517434 TRAV13-1A0A0B4J241 112 aa9.75□□□□□ -0.85
PCDHGA6-201ENST00000517434 WIPF3A6NGB9 483 aa9.75□□□□□ -0.85
PCDHGA6-201ENST00000517434 LINC01545Q5VT33 79 aa9.75□□□□□ -0.85
PCDHGA6-201ENST00000517434 TRGV1A0A0A0MS02 117 aa9.74□□□□□ -0.85
PCDHGA6-201ENST00000517434 SPRY4Q9C004 299 aa9.74□□□□□ -0.85
PCDHGA6-201ENST00000517434 CUL9Q8IWT3 2517 aa9.74□□□□□ -0.85
PCDHGA6-201ENST00000517434 J3QQQ9 107 aa9.74□□□□□ -0.85
PCDHGA6-201ENST00000517434 RHODO00212 210 aa9.74□□□□□ -0.85
PCDHGA6-201ENST00000517434 NDUFA4O00483 81 aa9.74□□□□□ -0.85
PCDHGA6-201ENST00000517434 PRB1P04280 392 aa9.74□□□□□ -0.85
PCDHGA6-201ENST00000517434 C6orf226Q5I0X4 101 aa9.74□□□□□ -0.85
PCDHGA6-201ENST00000517434 RANBP2P49792 3224 aaKnown RBP9.74□□□□□ -0.85
PCDHGA6-201ENST00000517434 DEFB104AQ8WTQ1 72 aa9.74□□□□□ -0.85
PCDHGA6-201ENST00000517434 ZNF833PQ6ZTB9 187 aa9.74□□□□□ -0.85
PCDHGA6-201ENST00000517434 NDUFA12Q9UI09 145 aa9.74□□□□□ -0.85
PCDHGA6-201ENST00000517434 CACNA1AO00555 2505 aa9.73□□□□□ -0.85
PCDHGA6-201ENST00000517434 CHD3Q12873 2000 aaKnown RBP9.73□□□□□ -0.85
PCDHGA6-201ENST00000517434 ZNF106Q9H2Y7 1883 aaKnown RBP9.73□□□□□ -0.85
PCDHGA6-201ENST00000517434 ANKRD39Q53RE8 183 aa9.73□□□□□ -0.85
PCDHGA6-201ENST00000517434 C1orf159Q96HA4 380 aa9.73□□□□□ -0.85
PCDHGA6-201ENST00000517434 CADP27708 2225 aa9.73□□□□□ -0.85
PCDHGA6-201ENST00000517434 K7EN84 100 aa9.73□□□□□ -0.85
PCDHGA6-201ENST00000517434 SMIM2Q9BVW6 85 aa9.73□□□□□ -0.85
PCDHGA6-201ENST00000517434 PLCE1Q9P212 2302 aa9.73□□□□□ -0.85
PCDHGA6-201ENST00000517434 ZGRF1Q86YA3 2104 aa9.73□□□□□ -0.85
PCDHGA6-201ENST00000517434 FAM236AA0A1B0GUQ0 79 aa9.73□□□□□ -0.85
PCDHGA6-201ENST00000517434 FAM236BA0A1B0GV22 79 aa9.73□□□□□ -0.85
PCDHGA6-201ENST00000517434 DEFB131AP59861 70 aa9.73□□□□□ -0.85
PCDHGA6-201ENST00000517434 HIGD1BQ9P298 99 aa9.73□□□□□ -0.85
PCDHGA6-201ENST00000517434 PHF3Q92576 2039 aaKnown RBP9.73□□□□□ -0.85
PCDHGA6-201ENST00000517434 UNC80Q8N2C7 3258 aa9.72□□□□□ -0.85
PCDHGA6-201ENST00000517434 ERCC8Q13216 396 aa9.72□□□□□ -0.85
PCDHGA6-201ENST00000517434 TRPT1Q86TN4 253 aaKnown RBP9.72□□□□□ -0.85
PCDHGA6-201ENST00000517434 LRRC75A-AS1Q8N1F1 130 aa9.72□□□□□ -0.85
PCDHGA6-201ENST00000517434 ATP6V0E2Q8NHE4 81 aa9.72□□□□□ -0.85
PCDHGA6-201ENST00000517434 C10orf105Q8TEF2 133 aa9.72□□□□□ -0.85
PCDHGA6-201ENST00000517434 IGKV1-39P01597 117 aa9.72□□□□□ -0.85
PCDHGA6-201ENST00000517434 IGKV1D-39P04432 117 aa9.72□□□□□ -0.85
PCDHGA6-201ENST00000517434 LINC00205P59089 165 aa9.72□□□□□ -0.85
PCDHGA6-201ENST00000517434 RBX1P62877 108 aa9.72□□□□□ -0.85
PCDHGA6-201ENST00000517434 TMEM243Q9BU79 118 aa9.72□□□□□ -0.85
PCDHGA6-201ENST00000517434 TMEM14BQ9NUH8 114 aa9.72□□□□□ -0.85
PCDHGA6-201ENST00000517434 DAD1P61803 113 aa9.71□□□□□ -0.85
PCDHGA6-201ENST00000517434 ADORA2A-AS1P86434 159 aa9.71□□□□□ -0.85
PCDHGA6-201ENST00000517434 Q71RC1 249 aaPredicted RBP9.71□□□□□ -0.85
PCDHGA6-201ENST00000517434 RNF138Q8WVD3 245 aa9.71□□□□□ -0.85
PCDHGA6-201ENST00000517434 RMI2Q96E14 147 aa9.71□□□□□ -0.85
PCDHGA6-201ENST00000517434 NOTCH3Q9UM47 2321 aa9.71□□□□□ -0.85
PCDHGA6-201ENST00000517434 TRBV19A0A075B6N1 114 aa9.71□□□□□ -0.86
PCDHGA6-201ENST00000517434 K7EM74 188 aa9.71□□□□□ -0.86
PCDHGA6-201ENST00000517434 C9orf66Q5T8R8 295 aa9.71□□□□□ -0.86
PCDHGA6-201ENST00000517434 LTBP2Q14767 1821 aa9.71□□□□□ -0.86
PCDHGA6-201ENST00000517434 RNF183Q96D59 192 aa9.71□□□□□ -0.86
PCDHGA6-201ENST00000517434 KNCNA6PVL3 124 aa9.7□□□□□ -0.86
PCDHGA6-201ENST00000517434 FXYD2P54710 66 aa9.7□□□□□ -0.86
PCDHGA6-201ENST00000517434 GTF3C1Q12789 2109 aa9.7□□□□□ -0.86
PCDHGA6-201ENST00000517434 RPL32P62910 135 aaKnown RBP9.7□□□□□ -0.86
PCDHGA6-201ENST00000517434 C5orf47Q569G3 176 aa9.7□□□□□ -0.86
PCDHGA6-201ENST00000517434 A0A087WWL8 130 aa9.7□□□□□ -0.86
PCDHGA6-201ENST00000517434 A0A1B0GX51 115 aa9.69□□□□□ -0.86
PCDHGA6-201ENST00000517434 INS-IGF2F8WCM5 200 aa9.69□□□□□ -0.86
PCDHGA6-201ENST00000517434 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.69□□□□□ -0.86
PCDHGA6-201ENST00000517434 CDH23Q9H251 3354 aa9.69□□□□□ -0.86
PCDHGA6-201ENST00000517434 A0A1W2PPI3 338 aa9.69□□□□□ -0.86
PCDHGA6-201ENST00000517434 DEFB112Q30KQ8 113 aa9.69□□□□□ -0.86
PCDHGA6-201ENST00000517434 PRR25Q96S07 402 aa9.69□□□□□ -0.86
PCDHGA6-201ENST00000517434 TRAV13-2A0A0B4J235 113 aa9.69□□□□□ -0.86
PCDHGA6-201ENST00000517434 IGFL4Q6B9Z1 124 aa9.69□□□□□ -0.86
PCDHGA6-201ENST00000517434 MRPL23Q16540 153 aaKnown RBP9.68□□□□□ -0.86
PCDHGA6-201ENST00000517434 C8orf49Q96NF6 230 aa9.68□□□□□ -0.86
PCDHGA6-201ENST00000517434 C20orf78Q9BR46 151 aa9.68□□□□□ -0.86
PCDHGA6-201ENST00000517434 NDPQ00604 133 aa9.68□□□□□ -0.86
PCDHGA6-201ENST00000517434 PLA2G2EQ9NZK7 142 aa9.68□□□□□ -0.86
PCDHGA6-201ENST00000517434 TMEM14CQ9P0S9 112 aa9.68□□□□□ -0.86
PCDHGA6-201ENST00000517434 A0A0B4J2C4 111 aa9.68□□□□□ -0.86
PCDHGA6-201ENST00000517434 SDHAF1A6NFY7 115 aa9.68□□□□□ -0.86
PCDHGA6-201ENST00000517434 RS1O15537 224 aa9.68□□□□□ -0.86
PCDHGA6-201ENST00000517434 LINC01620Q4KN68 170 aa9.68□□□□□ -0.86
PCDHGA6-201ENST00000517434 UBE2E2Q96LR5 201 aa9.68□□□□□ -0.86
PCDHGA6-201ENST00000517434 IGKV1-16P04430 117 aa9.68□□□□□ -0.86
PCDHGA6-201ENST00000517434 BAALC-AS2P0C853 105 aa9.68□□□□□ -0.86
PCDHGA6-201ENST00000517434 FOXE3Q13461 319 aa9.68□□□□□ -0.86
PCDHGA6-201ENST00000517434 IGHV3-73A0A0B4J1V6 119 aa9.67□□□□□ -0.86
PCDHGA6-201ENST00000517434 IGHV4-61A0A0C4DH41 118 aa9.67□□□□□ -0.86
PCDHGA6-201ENST00000517434 PRR20EP86478 221 aa9.67□□□□□ -0.86
PCDHGA6-201ENST00000517434 PRR20CP86479 221 aa9.67□□□□□ -0.86
PCDHGA6-201ENST00000517434 PRR20DP86480 221 aa9.67□□□□□ -0.86
PCDHGA6-201ENST00000517434 PRR20BP86481 221 aa9.67□□□□□ -0.86
PCDHGA6-201ENST00000517434 PRR20AP86496 221 aa9.67□□□□□ -0.86
PCDHGA6-201ENST00000517434 ZNF493Q6ZR52 646 aa9.67□□□□□ -0.86
PCDHGA6-201ENST00000517434 TRAV12-1A0A0B4J245 112 aa9.67□□□□□ -0.86
PCDHGA6-201ENST00000517434 C17orf58Q2M2W7 97 aa9.67□□□□□ -0.86
PCDHGA6-201ENST00000517434 LINC00173Q6ZV60 143 aa9.67□□□□□ -0.86
PCDHGA6-201ENST00000517434 FER1L5A0AVI2 2057 aa9.67□□□□□ -0.86
PCDHGA6-201ENST00000517434 K7EMI3 77 aa9.67□□□□□ -0.86
PCDHGA6-201ENST00000517434 DKK1O94907 266 aa9.67□□□□□ -0.86
PCDHGA6-201ENST00000517434 NDUFA4L2Q9NRX3 87 aa9.67□□□□□ -0.86
PCDHGA6-201ENST00000517434 ATP5G1P05496 136 aa9.67□□□□□ -0.86
PCDHGA6-201ENST00000517434 F8WEM9 126 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms