RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 Q86TA4 180 aa4.17□□□□□ -1.74
SCARNA18.1-201ENST00000516330 C6orf223Q8N319 242 aa4.17□□□□□ -1.74
SCARNA18.1-201ENST00000516330 KCNRGQ8N5I3 272 aa4.17□□□□□ -1.74
SCARNA18.1-201ENST00000516330 PCNPQ8WW12 178 aaKnown RBP4.17□□□□□ -1.74
SCARNA18.1-201ENST00000516330 PTH2Q96A98 100 aa4.17□□□□□ -1.74
SCARNA18.1-201ENST00000516330 TXNDC17Q9BRA2 123 aa4.17□□□□□ -1.74
SCARNA18.1-201ENST00000516330 MAP1LC3BQ9GZQ8 125 aa4.17□□□□□ -1.74
SCARNA18.1-201ENST00000516330 EPDR1Q9UM22 224 aa4.17□□□□□ -1.74
SCARNA18.1-201ENST00000516330 LINC00588Q9Y4M8 146 aa4.17□□□□□ -1.74
SCARNA18.1-201ENST00000516330 MUC4Q99102 2169 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 IGLV2-18A0A075B6J9 118 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 TRAV8-1A0A0A6YYK1 113 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 IGHV3-16A0A0C4DH30 117 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 TRBV6-1A0A0K0K1D8 114 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 KANTRA0A1W2PQU2 76 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 PEX7O00628 323 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 HMGB3O15347 200 aaKnown RBP4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 PAX4O43316 350 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 BCL2L11O43521 198 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 GCGP01275 180 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 IGLV2-11P01706 119 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 TYMSP04818 313 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 PRB4P10163 310 aaPredicted RBP4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 TPT1P13693 172 aaKnown RBP4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 CRYBA4P53673 196 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 SUMO1P63165 101 aaKnown RBP4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 GNG5P63218 68 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 ZNF726P1Q15940 193 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 TMEM183BQ1AE95 376 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 LGALSLQ3ZCW2 172 aaPredicted RBP4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 Q5BKY6 102 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 MUC21Q5SSG8 566 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 EIF5AL1Q6IS14 154 aaKnown RBP4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 TMEM183AQ8IXX5 376 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 FMC1Q96HJ9 113 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 VSIG2Q96IQ7 327 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 MRPL16Q9NX20 251 aaKnown RBP4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 NAGKQ9UJ70 344 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 PSG8Q9UQ74 426 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 ZFP30Q9Y2G7 519 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 FAT2Q9NYQ8 4349 aa4.16□□□□□ -1.74
SCARNA18.1-201ENST00000516330 DNAH10Q8IVF4 4471 aa4.15□□□□□ -1.74
SCARNA18.1-201ENST00000516330 TRGV4A0A0C4DH28 118 aa4.15□□□□□ -1.75
SCARNA18.1-201ENST00000516330 A0A0J9YY99 117 aa4.15□□□□□ -1.75
SCARNA18.1-201ENST00000516330 TRBV6-4A0A1B0GX49 114 aa4.15□□□□□ -1.75
SCARNA18.1-201ENST00000516330 FAM74A7A6NL05 159 aa4.15□□□□□ -1.75
SCARNA18.1-201ENST00000516330 PFDN1O60925 122 aa4.15□□□□□ -1.75
SCARNA18.1-201ENST00000516330 IFNA7P01567 189 aa4.15□□□□□ -1.75
SCARNA18.1-201ENST00000516330 CXCL1P09341 107 aa4.15□□□□□ -1.75
SCARNA18.1-201ENST00000516330 MGST1P10620 155 aaKnown RBP4.15□□□□□ -1.75
SCARNA18.1-201ENST00000516330 SRIP30626 198 aa4.15□□□□□ -1.75
SCARNA18.1-201ENST00000516330 RAB5CP51148 216 aa4.15□□□□□ -1.75
SCARNA18.1-201ENST00000516330 TIRAPP58753 221 aa4.15□□□□□ -1.75
SCARNA18.1-201ENST00000516330 UBE2G1P62253 170 aa4.15□□□□□ -1.75
SCARNA18.1-201ENST00000516330 RHOHQ15669 191 aa4.15□□□□□ -1.75
SCARNA18.1-201ENST00000516330 NEGR1Q7Z3B1 354 aa4.15□□□□□ -1.75
SCARNA18.1-201ENST00000516330 C10orf126Q8N4M7 172 aa4.15□□□□□ -1.75
SCARNA18.1-201ENST00000516330 TVP23CQ96ET8 276 aa4.15□□□□□ -1.75
SCARNA18.1-201ENST00000516330 C9orf85Q96MD7 179 aa4.15□□□□□ -1.75
SCARNA18.1-201ENST00000516330 Q9H8V8 135 aa4.15□□□□□ -1.75
SCARNA18.1-201ENST00000516330 CYTL1Q9NRR1 136 aa4.15□□□□□ -1.75
SCARNA18.1-201ENST00000516330 MDFICQ9P1T7 246 aa4.15□□□□□ -1.75
SCARNA18.1-201ENST00000516330 HHLA3Q9XRX5 114 aa4.15□□□□□ -1.75
SCARNA18.1-201ENST00000516330 DNAH2Q9P225 4427 aa4.15□□□□□ -1.75
SCARNA18.1-201ENST00000516330 A8MWV9 139 aa4.14□□□□□ -1.75
SCARNA18.1-201ENST00000516330 TEX46H3BTG2 121 aa4.14□□□□□ -1.75
SCARNA18.1-201ENST00000516330 M0R2N4 97 aa4.14□□□□□ -1.75
SCARNA18.1-201ENST00000516330 RHODO00212 210 aa4.14□□□□□ -1.75
SCARNA18.1-201ENST00000516330 SIVA1O15304 175 aa4.14□□□□□ -1.75
SCARNA18.1-201ENST00000516330 EIF3GO75821 320 aaKnown RBP eCLIP4.14□□□□□ -1.75
SCARNA18.1-201ENST00000516330 S100A9P06702 114 aaKnown RBP4.14□□□□□ -1.75
SCARNA18.1-201ENST00000516330 MED14OSP0DP75 135 aa4.14□□□□□ -1.75
SCARNA18.1-201ENST00000516330 ASIPP42127 132 aa4.14□□□□□ -1.75
SCARNA18.1-201ENST00000516330 AKR1C3P42330 323 aa4.14□□□□□ -1.75
SCARNA18.1-201ENST00000516330 FHL2Q14192 279 aa4.14□□□□□ -1.75
SCARNA18.1-201ENST00000516330 DNLZQ5SXM8 178 aa4.14□□□□□ -1.75
SCARNA18.1-201ENST00000516330 ZFP2Q6ZN57 461 aa4.14□□□□□ -1.75
SCARNA18.1-201ENST00000516330 NFE4Q86UQ8 179 aa4.14□□□□□ -1.75
SCARNA18.1-201ENST00000516330 TCTE3Q8IZS6 198 aa4.14□□□□□ -1.75
SCARNA18.1-201ENST00000516330 OR4C5Q8NGB2 326 aa4.14□□□□□ -1.75
SCARNA18.1-201ENST00000516330 SMIM12Q96EX1 92 aa4.14□□□□□ -1.75
SCARNA18.1-201ENST00000516330 ZNF471Q9BX82 626 aaPredicted RBP4.14□□□□□ -1.75
SCARNA18.1-201ENST00000516330 MANBALQ9NQG1 85 aa4.14□□□□□ -1.75
SCARNA18.1-201ENST00000516330 IL36BQ9NZH7 164 aa4.14□□□□□ -1.75
SCARNA18.1-201ENST00000516330 PKHD1P08F94 4074 aa4.13□□□□□ -1.75
SCARNA18.1-201ENST00000516330 TRAV9-2A0A087WT02 112 aa4.13□□□□□ -1.75
SCARNA18.1-201ENST00000516330 FABP5P3A8MUU1 101 aa4.13□□□□□ -1.75
SCARNA18.1-201ENST00000516330 K7EQD1 137 aa4.13□□□□□ -1.75
SCARNA18.1-201ENST00000516330 LTAP01374 205 aa4.13□□□□□ -1.75
SCARNA18.1-201ENST00000516330 RNASE3P12724 160 aaKnown RBP4.13□□□□□ -1.75
SCARNA18.1-201ENST00000516330 GATA1P15976 413 aaPredicted RBP4.13□□□□□ -1.75
SCARNA18.1-201ENST00000516330 S100A4P26447 101 aaKnown RBP4.13□□□□□ -1.75
SCARNA18.1-201ENST00000516330 TAGLN2P37802 199 aaKnown RBP4.13□□□□□ -1.75
SCARNA18.1-201ENST00000516330 ESRGQ1W209 222 aa4.13□□□□□ -1.75
SCARNA18.1-201ENST00000516330 LINC01559Q495D7 138 aa4.13□□□□□ -1.75
SCARNA18.1-201ENST00000516330 ZNF876PQ49A33 203 aa4.13□□□□□ -1.75
SCARNA18.1-201ENST00000516330 PRNTQ86SH4 94 aa4.13□□□□□ -1.75
SCARNA18.1-201ENST00000516330 SYT8Q8NBV8 401 aa4.13□□□□□ -1.75
SCARNA18.1-201ENST00000516330 MBD3L1Q8WWY6 194 aa4.13□□□□□ -1.75
SCARNA18.1-201ENST00000516330 ZNF479Q96JC4 524 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms