RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 Q6ZR03 302 aa10.53□□□□□ -0.72
TCOF1-214ENST00000515035 WISP1O95388 367 aa10.53□□□□□ -0.72
TCOF1-214ENST00000515035 C15orf65H3BRN8 121 aa10.53□□□□□ -0.72
TCOF1-214ENST00000515035 ZNF134P52741 427 aa10.53□□□□□ -0.72
TCOF1-214ENST00000515035 LINC01545Q5VT33 79 aa10.53□□□□□ -0.72
TCOF1-214ENST00000515035 TEN1Q86WV5 123 aa10.53□□□□□ -0.72
TCOF1-214ENST00000515035 J3QKU1 62 aa10.52□□□□□ -0.73
TCOF1-214ENST00000515035 DUX4L9Q6RFH8 374 aaPredicted RBP10.52□□□□□ -0.73
TCOF1-214ENST00000515035 PCNX2A6NKB5 2137 aa10.52□□□□□ -0.73
TCOF1-214ENST00000515035 CR1LQ2VPA4 569 aa10.52□□□□□ -0.73
TCOF1-214ENST00000515035 RSPO1Q2MKA7 263 aaPredicted RBP10.52□□□□□ -0.73
TCOF1-214ENST00000515035 NKAPP1Q8N9T2 125 aa10.52□□□□□ -0.73
TCOF1-214ENST00000515035 PRR30Q53SZ7 412 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-214ENST00000515035 TAX1BP3O14907 124 aa10.51□□□□□ -0.73
TCOF1-214ENST00000515035 CRYGCP07315 174 aa10.51□□□□□ -0.73
TCOF1-214ENST00000515035 EGR2P11161 476 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-214ENST00000515035 GATA4P43694 442 aa10.51□□□□□ -0.73
TCOF1-214ENST00000515035 UBE2DNLQ8IWF7 75 aa10.51□□□□□ -0.73
TCOF1-214ENST00000515035 PSCAO43653 123 aa10.51□□□□□ -0.73
TCOF1-214ENST00000515035 CFHR4Q92496 578 aa10.51□□□□□ -0.73
TCOF1-214ENST00000515035 BPESC1Q9GZL8 116 aa10.51□□□□□ -0.73
TCOF1-214ENST00000515035 TANC1Q9C0D5 1861 aa10.51□□□□□ -0.73
TCOF1-214ENST00000515035 HOXD3P31249 432 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-214ENST00000515035 E7EQL1 145 aa10.51□□□□□ -0.73
TCOF1-214ENST00000515035 FXYD2P54710 66 aa10.51□□□□□ -0.73
TCOF1-214ENST00000515035 C17orf77Q96MU5 243 aa10.51□□□□□ -0.73
TCOF1-214ENST00000515035 TICRRQ7Z2Z1 1910 aa10.5□□□□□ -0.73
TCOF1-214ENST00000515035 DYSFO75923 2080 aa10.5□□□□□ -0.73
TCOF1-214ENST00000515035 PRSS47A8MTI9 375 aa10.5□□□□□ -0.73
TCOF1-214ENST00000515035 K7EMI3 77 aa10.5□□□□□ -0.73
TCOF1-214ENST00000515035 GATA1P15976 413 aaPredicted RBP10.5□□□□□ -0.73
TCOF1-214ENST00000515035 LINC00311Q8N616 119 aa10.5□□□□□ -0.73
TCOF1-214ENST00000515035 ZNF491Q8N8L2 437 aa10.5□□□□□ -0.73
TCOF1-214ENST00000515035 LINC01356Q8N9X3 169 aa10.5□□□□□ -0.73
TCOF1-214ENST00000515035 FAM236AA0A1B0GUQ0 79 aa10.5□□□□□ -0.73
TCOF1-214ENST00000515035 FAM236BA0A1B0GV22 79 aa10.5□□□□□ -0.73
TCOF1-214ENST00000515035 RNF166Q96A37 237 aaPredicted RBP10.5□□□□□ -0.73
TCOF1-214ENST00000515035 UBE2E1P51965 193 aa10.5□□□□□ -0.73
TCOF1-214ENST00000515035 POU2AF1Q16633 256 aa10.5□□□□□ -0.73
TCOF1-214ENST00000515035 Q8TCH9 128 aa10.5□□□□□ -0.73
TCOF1-214ENST00000515035 hADV29S1A0JD25 119 aa10.5□□□□□ -0.73
TCOF1-214ENST00000515035 ZNF524Q96C55 264 aa10.5□□□□□ -0.73
TCOF1-214ENST00000515035 NDUFA4O00483 81 aa10.49□□□□□ -0.73
TCOF1-214ENST00000515035 LOXP28300 417 aaPredicted RBP10.49□□□□□ -0.73
TCOF1-214ENST00000515035 Q9H8V8 135 aa10.49□□□□□ -0.73
TCOF1-214ENST00000515035 MALRD1Q5VYJ5 2156 aa10.49□□□□□ -0.73
TCOF1-214ENST00000515035 SRSF2Q01130 221 aaKnown RBP10.49□□□□□ -0.73
TCOF1-214ENST00000515035 ORMDL1Q9P0S3 153 aa10.49□□□□□ -0.73
TCOF1-214ENST00000515035 J3KT08 172 aa10.49□□□□□ -0.73
TCOF1-214ENST00000515035 PLA2G2EQ9NZK7 142 aa10.49□□□□□ -0.73
TCOF1-214ENST00000515035 ATOX1O00244 68 aa10.49□□□□□ -0.73
TCOF1-214ENST00000515035 RHOHQ15669 191 aa10.48□□□□□ -0.73
TCOF1-214ENST00000515035 TRAV26-1A0A087WT03 109 aa10.48□□□□□ -0.73
TCOF1-214ENST00000515035 A0A1B0GX51 115 aa10.48□□□□□ -0.73
TCOF1-214ENST00000515035 RUSC1-AS1Q66K80 236 aa10.48□□□□□ -0.73
TCOF1-214ENST00000515035 C5orf47Q569G3 176 aa10.48□□□□□ -0.73
TCOF1-214ENST00000515035 DYNAPQ8N1N2 210 aa10.48□□□□□ -0.73
TCOF1-214ENST00000515035 A4D1N5 150 aa10.48□□□□□ -0.73
TCOF1-214ENST00000515035 GATA3P23771 443 aa10.48□□□□□ -0.73
TCOF1-214ENST00000515035 FOXI1Q12951 378 aa10.48□□□□□ -0.73
TCOF1-214ENST00000515035 LINC01620Q4KN68 170 aa10.47□□□□□ -0.73
TCOF1-214ENST00000515035 TTTY13Q9BZ97 58 aa10.47□□□□□ -0.73
TCOF1-214ENST00000515035 AGPAT4-IT1Q9H0P7 198 aa10.47□□□□□ -0.73
TCOF1-214ENST00000515035 DIAPH2-AS1Q14236 149 aa10.47□□□□□ -0.73
TCOF1-214ENST00000515035 IGHV1-69DA0A0B4J2H0 117 aa10.47□□□□□ -0.73
TCOF1-214ENST00000515035 ZNF503-AS2A6NEH8 195 aa10.47□□□□□ -0.73
TCOF1-214ENST00000515035 IGLV3-1P01715 115 aa10.47□□□□□ -0.73
TCOF1-214ENST00000515035 WNK1Q9H4A3 2382 aa10.47□□□□□ -0.73
TCOF1-214ENST00000515035 PRB1P04280 392 aa10.47□□□□□ -0.73
TCOF1-214ENST00000515035 NLRC5Q86WI3 1866 aa10.46□□□□□ -0.73
TCOF1-214ENST00000515035 F5H768 121 aa10.46□□□□□ -0.73
TCOF1-214ENST00000515035 FOXE3Q13461 319 aa10.46□□□□□ -0.73
TCOF1-214ENST00000515035 IGKV3D-7A0A0C4DH55 119 aa10.46□□□□□ -0.74
TCOF1-214ENST00000515035 GNRH2O43555 120 aa10.46□□□□□ -0.74
TCOF1-214ENST00000515035 PLXNA4Q9HCM2 1894 aa10.46□□□□□ -0.74
TCOF1-214ENST00000515035 A0A0B4J2C4 111 aa10.45□□□□□ -0.74
TCOF1-214ENST00000515035 F6UB75 175 aa10.45□□□□□ -0.74
TCOF1-214ENST00000515035 G3V4G9 280 aa10.45□□□□□ -0.74
TCOF1-214ENST00000515035 C3orf56Q8N813 242 aa10.45□□□□□ -0.74
TCOF1-214ENST00000515035 HIGD1BQ9P298 99 aa10.45□□□□□ -0.74
TCOF1-214ENST00000515035 IGLV3-9A0A075B6K5 115 aa10.45□□□□□ -0.74
TCOF1-214ENST00000515035 MUSTN1Q8IVN3 82 aa10.45□□□□□ -0.74
TCOF1-214ENST00000515035 NDUFC2O95298 119 aa10.45□□□□□ -0.74
TCOF1-214ENST00000515035 NACAE9PAV3 2078 aa10.45□□□□□ -0.74
TCOF1-214ENST00000515035 MRPL53Q96EL3 112 aaKnown RBP10.45□□□□□ -0.74
TCOF1-214ENST00000515035 DAD1P61803 113 aa10.44□□□□□ -0.74
TCOF1-214ENST00000515035 ICOSQ9Y6W8 199 aa10.44□□□□□ -0.74
TCOF1-214ENST00000515035 TTC28Q96AY4 2481 aa10.44□□□□□ -0.74
TCOF1-214ENST00000515035 EML6Q6ZMW3 1958 aa10.43□□□□□ -0.74
TCOF1-214ENST00000515035 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.43□□□□□ -0.74
TCOF1-214ENST00000515035 IGKV2-29A2NJV5 120 aaPredicted RBP10.43□□□□□ -0.74
TCOF1-214ENST00000515035 SPRY2O43597 315 aa10.43□□□□□ -0.74
TCOF1-214ENST00000515035 MSMBP08118 114 aa10.43□□□□□ -0.74
TCOF1-214ENST00000515035 SLC25A29Q8N8R3 303 aa10.43□□□□□ -0.74
TCOF1-214ENST00000515035 RNF223E7ERA6 249 aa10.43□□□□□ -0.74
TCOF1-214ENST00000515035 IGHG2P01859 326 aa10.43□□□□□ -0.74
TCOF1-214ENST00000515035 MRPL23Q16540 153 aaKnown RBP10.43□□□□□ -0.74
TCOF1-214ENST00000515035 RPL39LQ96EH5 51 aaKnown RBP10.43□□□□□ -0.74
TCOF1-214ENST00000515035 PROK2Q9HC23 129 aa10.43□□□□□ -0.74
TCOF1-214ENST00000515035 MSRB1Q9NZV6 116 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms