RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 TREM1Q9NP99 234 aa7.17□□□□□ -1.26
HMGXB3-205ENST00000514469 TRAV4A0A0B4J268 109 aa7.16□□□□□ -1.26
HMGXB3-205ENST00000514469 TRGV4A0A0C4DH28 118 aa7.16□□□□□ -1.26
HMGXB3-205ENST00000514469 C16orf90A8MZG2 172 aa7.16□□□□□ -1.26
HMGXB3-205ENST00000514469 GGTLC3B5MD39 225 aa7.16□□□□□ -1.26
HMGXB3-205ENST00000514469 SIVA1O15304 175 aa7.16□□□□□ -1.26
HMGXB3-205ENST00000514469 GNRH2O43555 120 aa7.16□□□□□ -1.26
HMGXB3-205ENST00000514469 CXorf1O96002 111 aa7.16□□□□□ -1.26
HMGXB3-205ENST00000514469 LINC00315P59091 139 aa7.16□□□□□ -1.26
HMGXB3-205ENST00000514469 MRPL23Q16540 153 aaKnown RBP7.16□□□□□ -1.26
HMGXB3-205ENST00000514469 SDF2L1Q9HCN8 221 aa7.16□□□□□ -1.26
HMGXB3-205ENST00000514469 TNFSF18Q9UNG2 199 aa7.16□□□□□ -1.26
HMGXB3-205ENST00000514469 FXYD6-FXYD2A0A087WZ82 144 aa7.15□□□□□ -1.26
HMGXB3-205ENST00000514469 K7EQD1 137 aa7.15□□□□□ -1.26
HMGXB3-205ENST00000514469 M0R2P5 195 aa7.15□□□□□ -1.26
HMGXB3-205ENST00000514469 IGLV2-11P01706 119 aa7.15□□□□□ -1.26
HMGXB3-205ENST00000514469 RPL7L1Q6DKI1 246 aaKnown RBP7.15□□□□□ -1.26
HMGXB3-205ENST00000514469 LYPD5Q6UWN5 251 aa7.15□□□□□ -1.26
HMGXB3-205ENST00000514469 Q6ZRN7 208 aaPredicted RBP7.15□□□□□ -1.26
HMGXB3-205ENST00000514469 NEGR1Q7Z3B1 354 aa7.15□□□□□ -1.26
HMGXB3-205ENST00000514469 TMEM75Q8N9X5 138 aa7.15□□□□□ -1.26
HMGXB3-205ENST00000514469 INO80EQ8NBZ0 244 aaPredicted RBP7.15□□□□□ -1.26
HMGXB3-205ENST00000514469 KCNS1Q96KK3 526 aa7.15□□□□□ -1.26
HMGXB3-205ENST00000514469 SGK494Q96LW2 274 aa7.15□□□□□ -1.26
HMGXB3-205ENST00000514469 NDFIP1Q9BT67 221 aa7.15□□□□□ -1.26
HMGXB3-205ENST00000514469 ACTR3CQ9C0K3 210 aaPredicted RBP7.15□□□□□ -1.26
HMGXB3-205ENST00000514469 TMEM167BQ9NRX6 74 aa7.15□□□□□ -1.26
HMGXB3-205ENST00000514469 BORCS7-ASMTA0A0B4J1R7 106 aa7.14□□□□□ -1.27
HMGXB3-205ENST00000514469 G3V3Q6 166 aa7.14□□□□□ -1.27
HMGXB3-205ENST00000514469 K7EQM0 130 aa7.14□□□□□ -1.27
HMGXB3-205ENST00000514469 CDK2AP2O75956 126 aa7.14□□□□□ -1.27
HMGXB3-205ENST00000514469 ORM1P02763 201 aa7.14□□□□□ -1.27
HMGXB3-205ENST00000514469 GYPEP15421 78 aa7.14□□□□□ -1.27
HMGXB3-205ENST00000514469 SRIP30626 198 aa7.14□□□□□ -1.27
HMGXB3-205ENST00000514469 ZNF80P51504 273 aaPredicted RBP7.14□□□□□ -1.27
HMGXB3-205ENST00000514469 ZNF726P1Q15940 193 aa7.14□□□□□ -1.27
HMGXB3-205ENST00000514469 SPATA12Q7Z6I5 190 aa7.14□□□□□ -1.27
HMGXB3-205ENST00000514469 CYB561D1Q8N8Q1 229 aa7.14□□□□□ -1.27
HMGXB3-205ENST00000514469 OR2T35Q8NGX2 323 aa7.14□□□□□ -1.27
HMGXB3-205ENST00000514469 PCNPQ8WW12 178 aaKnown RBP7.14□□□□□ -1.27
HMGXB3-205ENST00000514469 C11orf21Q9P2W6 132 aa7.14□□□□□ -1.27
HMGXB3-205ENST00000514469 EPDR1Q9UM22 224 aa7.14□□□□□ -1.27
HMGXB3-205ENST00000514469 PSG8Q9UQ74 426 aa7.14□□□□□ -1.27
HMGXB3-205ENST00000514469 A0A1W2PRE2 83 aa7.13□□□□□ -1.27
HMGXB3-205ENST00000514469 FBLL1A6NHQ2 334 aaKnown RBP7.13□□□□□ -1.27
HMGXB3-205ENST00000514469 C9JCJ5 164 aa7.13□□□□□ -1.27
HMGXB3-205ENST00000514469 GCGP01275 180 aa7.13□□□□□ -1.27
HMGXB3-205ENST00000514469 PFN1P07737 140 aaKnown RBP7.13□□□□□ -1.27
HMGXB3-205ENST00000514469 SUMO1P63165 101 aaKnown RBP7.13□□□□□ -1.27
HMGXB3-205ENST00000514469 FLI1Q01543 452 aaPredicted RBP7.13□□□□□ -1.27
HMGXB3-205ENST00000514469 OR4C5Q8NGB2 326 aa7.13□□□□□ -1.27
HMGXB3-205ENST00000514469 MUC4Q99102 2169 aa7.13□□□□□ -1.27
HMGXB3-205ENST00000514469 CTXND1A0A1B0GTU2 59 aa7.12□□□□□ -1.27
HMGXB3-205ENST00000514469 TAAR5O14804 337 aa7.12□□□□□ -1.27
HMGXB3-205ENST00000514469 GATA1P15976 413 aaPredicted RBP7.12□□□□□ -1.27
HMGXB3-205ENST00000514469 KRTAP10-2P60368 255 aa7.12□□□□□ -1.27
HMGXB3-205ENST00000514469 RGS21Q2M5E4 152 aa7.12□□□□□ -1.27
HMGXB3-205ENST00000514469 ZFP69Q49AA0 526 aa7.12□□□□□ -1.27
HMGXB3-205ENST00000514469 SMUG1Q53HV7 270 aa7.12□□□□□ -1.27
HMGXB3-205ENST00000514469 PRNTQ86SH4 94 aa7.12□□□□□ -1.27
HMGXB3-205ENST00000514469 WFDC10BQ8IUB3 73 aa7.12□□□□□ -1.27
HMGXB3-205ENST00000514469 C9orf85Q96MD7 179 aa7.12□□□□□ -1.27
HMGXB3-205ENST00000514469 TXNDC17Q9BRA2 123 aa7.12□□□□□ -1.27
HMGXB3-205ENST00000514469 LOC100131303A0A0U1RQF7 123 aa7.11□□□□□ -1.27
HMGXB3-205ENST00000514469 ZNF876PQ49A33 203 aa7.11□□□□□ -1.27
HMGXB3-205ENST00000514469 SAPCD1Q5SSQ6 148 aa7.11□□□□□ -1.27
HMGXB3-205ENST00000514469 CFAP126Q5VTH2 177 aa7.11□□□□□ -1.27
HMGXB3-205ENST00000514469 DPPA3Q6W0C5 159 aa7.11□□□□□ -1.27
HMGXB3-205ENST00000514469 PTH2Q96A98 100 aa7.11□□□□□ -1.27
HMGXB3-205ENST00000514469 LY96Q9Y6Y9 160 aa7.11□□□□□ -1.27
HMGXB3-205ENST00000514469 FAM74A7A6NL05 159 aa7.1□□□□□ -1.27
HMGXB3-205ENST00000514469 K7EP13 123 aa7.1□□□□□ -1.27
HMGXB3-205ENST00000514469 ARPC5O15511 151 aa7.1□□□□□ -1.27
HMGXB3-205ENST00000514469 RS1O15537 224 aa7.1□□□□□ -1.27
HMGXB3-205ENST00000514469 CIDEAO60543 219 aa7.1□□□□□ -1.27
HMGXB3-205ENST00000514469 DNAH10OSP0CZ25 163 aa7.1□□□□□ -1.27
HMGXB3-205ENST00000514469 RNASE3P12724 160 aaKnown RBP7.1□□□□□ -1.27
HMGXB3-205ENST00000514469 TIRAPP58753 221 aa7.1□□□□□ -1.27
HMGXB3-205ENST00000514469 ZNF506Q5JVG8 444 aa7.1□□□□□ -1.27
HMGXB3-205ENST00000514469 AKR1C8PQ5T2L2 129 aa7.1□□□□□ -1.27
HMGXB3-205ENST00000514469 SH2D6Q7Z4S9 175 aa7.1□□□□□ -1.27
HMGXB3-205ENST00000514469 Q86TA4 180 aa7.1□□□□□ -1.27
HMGXB3-205ENST00000514469 LINC00479Q96M42 142 aa7.1□□□□□ -1.27
HMGXB3-205ENST00000514469 CYTL1Q9NRR1 136 aa7.1□□□□□ -1.27
HMGXB3-205ENST00000514469 ARL2-SNX15V9GYD0 113 aa7.1□□□□□ -1.27
HMGXB3-205ENST00000514469 TRAV9-2A0A087WT02 112 aa7.09□□□□□ -1.27
HMGXB3-205ENST00000514469 TRAV34A0A0B4J273 112 aa7.09□□□□□ -1.27
HMGXB3-205ENST00000514469 PEX7O00628 323 aa7.09□□□□□ -1.27
HMGXB3-205ENST00000514469 FGF8P55075 233 aaPredicted RBP7.09□□□□□ -1.27
HMGXB3-205ENST00000514469 UBE2G2P60604 165 aa7.09□□□□□ -1.27
HMGXB3-205ENST00000514469 RHOHQ15669 191 aa7.09□□□□□ -1.27
HMGXB3-205ENST00000514469 NFE4Q86UQ8 179 aa7.09□□□□□ -1.27
HMGXB3-205ENST00000514469 SLC25A29Q8N8R3 303 aa7.09□□□□□ -1.27
HMGXB3-205ENST00000514469 KRTAP4-5Q9BYR2 181 aa7.09□□□□□ -1.27
HMGXB3-205ENST00000514469 NKX6-2Q9C056 277 aaPredicted RBP7.09□□□□□ -1.27
HMGXB3-205ENST00000514469 TNFRSF18Q9Y5U5 241 aa7.09□□□□□ -1.27
HMGXB3-205ENST00000514469 IGKV3D-20A0A0C4DH25 116 aa7.08□□□□□ -1.28
HMGXB3-205ENST00000514469 TRBV6-4A0A1B0GX49 114 aa7.08□□□□□ -1.28
HMGXB3-205ENST00000514469 MAP1LC3B2A6NCE7 125 aa7.08□□□□□ -1.28
HMGXB3-205ENST00000514469 PGPEP1LA6NFU8 196 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms