RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 OR2G3Q8NGZ4 309 aa9.3□□□□□ -0.92
CCHCR1-227ENST00000508852 ZNF479Q96JC4 524 aa9.3□□□□□ -0.92
CCHCR1-227ENST00000508852 PSMG3Q9BT73 122 aaPredicted RBP9.3□□□□□ -0.92
CCHCR1-227ENST00000508852 NAGKQ9UJ70 344 aa9.3□□□□□ -0.92
CCHCR1-227ENST00000508852 RPH3ALQ9UNE2 315 aa9.3□□□□□ -0.92
CCHCR1-227ENST00000508852 GYPEP15421 78 aa9.29□□□□□ -0.92
CCHCR1-227ENST00000508852 CDC34P49427 236 aaPredicted RBP9.29□□□□□ -0.92
CCHCR1-227ENST00000508852 TIRAPP58753 221 aa9.29□□□□□ -0.92
CCHCR1-227ENST00000508852 ZFP69Q49AA0 526 aa9.29□□□□□ -0.92
CCHCR1-227ENST00000508852 Q6ZQT7 251 aa9.29□□□□□ -0.92
CCHCR1-227ENST00000508852 Q6ZRN7 208 aaPredicted RBP9.29□□□□□ -0.92
CCHCR1-227ENST00000508852 Q8N1X5 172 aa9.29□□□□□ -0.92
CCHCR1-227ENST00000508852 C5orf17Q8NAS9 161 aa9.29□□□□□ -0.92
CCHCR1-227ENST00000508852 SH3BGRL3Q9H299 93 aa9.29□□□□□ -0.92
CCHCR1-227ENST00000508852 TMEM167BQ9NRX6 74 aa9.29□□□□□ -0.92
CCHCR1-227ENST00000508852 IGHV3-16A0A0C4DH30 117 aa9.28□□□□□ -0.92
CCHCR1-227ENST00000508852 TAAR5O14804 337 aa9.28□□□□□ -0.92
CCHCR1-227ENST00000508852 PFN1P07737 140 aaKnown RBP9.28□□□□□ -0.92
CCHCR1-227ENST00000508852 STAG3L2P0CL84 134 aa9.28□□□□□ -0.92
CCHCR1-227ENST00000508852 STAG3L3P0CL85 134 aa9.28□□□□□ -0.92
CCHCR1-227ENST00000508852 WFDC1Q9HC57 220 aa9.28□□□□□ -0.92
CCHCR1-227ENST00000508852 SFTA3P0C7M3 94 aa9.27□□□□□ -0.93
CCHCR1-227ENST00000508852 DNAH10OSP0CZ25 163 aa9.27□□□□□ -0.93
CCHCR1-227ENST00000508852 ARL14EPLP0DKL9 152 aa9.27□□□□□ -0.93
CCHCR1-227ENST00000508852 KRTAP10-2P60368 255 aa9.27□□□□□ -0.93
CCHCR1-227ENST00000508852 RAB2AP61019 212 aa9.27□□□□□ -0.93
CCHCR1-227ENST00000508852 SAPCD1Q5SSQ6 148 aa9.27□□□□□ -0.93
CCHCR1-227ENST00000508852 SUN5Q8TC36 379 aa9.27□□□□□ -0.93
CCHCR1-227ENST00000508852 AQP10Q96PS8 301 aa9.27□□□□□ -0.93
CCHCR1-227ENST00000508852 MSRB1Q9NZV6 116 aa9.27□□□□□ -0.93
CCHCR1-227ENST00000508852 GNRH2O43555 120 aa9.26□□□□□ -0.93
CCHCR1-227ENST00000508852 PTTG1O95997 202 aa9.26□□□□□ -0.93
CCHCR1-227ENST00000508852 CXorf1O96002 111 aa9.26□□□□□ -0.93
CCHCR1-227ENST00000508852 TYMSP04818 313 aa9.26□□□□□ -0.93
CCHCR1-227ENST00000508852 INO80EQ8NBZ0 244 aaPredicted RBP9.26□□□□□ -0.93
CCHCR1-227ENST00000508852 PTH2Q96A98 100 aa9.26□□□□□ -0.93
CCHCR1-227ENST00000508852 PRADC1Q9BSG0 188 aa9.26□□□□□ -0.93
CCHCR1-227ENST00000508852 ACTR3CQ9C0K3 210 aaPredicted RBP9.26□□□□□ -0.93
CCHCR1-227ENST00000508852 MED28Q9H204 178 aa9.26□□□□□ -0.93
CCHCR1-227ENST00000508852 TNFSF18Q9UNG2 199 aa9.26□□□□□ -0.93
CCHCR1-227ENST00000508852 ALG5Q9Y673 324 aa9.26□□□□□ -0.93
CCHCR1-227ENST00000508852 TRAV8-6A0A0B4J262 113 aa9.25□□□□□ -0.93
CCHCR1-227ENST00000508852 TCRAP04437 139 aa9.25□□□□□ -0.93
CCHCR1-227ENST00000508852 GATA1P15976 413 aaPredicted RBP9.25□□□□□ -0.93
CCHCR1-227ENST00000508852 PPT1P50897 306 aa9.25□□□□□ -0.93
CCHCR1-227ENST00000508852 ZNF876PQ49A33 203 aa9.25□□□□□ -0.93
CCHCR1-227ENST00000508852 SMUG1Q53HV7 270 aa9.25□□□□□ -0.93
CCHCR1-227ENST00000508852 NHLRC2Q8NBF2 726 aa9.25□□□□□ -0.93
CCHCR1-227ENST00000508852 HSD17B11Q8NBQ5 300 aa9.25□□□□□ -0.93
CCHCR1-227ENST00000508852 RAB24Q969Q5 203 aa9.25□□□□□ -0.93
CCHCR1-227ENST00000508852 SCRT2Q9NQ03 307 aa9.25□□□□□ -0.93
CCHCR1-227ENST00000508852 TRAV8-1A0A0A6YYK1 113 aa9.24□□□□□ -0.93
CCHCR1-227ENST00000508852 BORCS7-ASMTA0A0B4J1R7 106 aa9.24□□□□□ -0.93
CCHCR1-227ENST00000508852 TRBV6-4A0A1B0GX49 114 aa9.24□□□□□ -0.93
CCHCR1-227ENST00000508852 F6UZH7 168 aa9.24□□□□□ -0.93
CCHCR1-227ENST00000508852 CRYGDP07320 174 aa9.24□□□□□ -0.93
CCHCR1-227ENST00000508852 GCHFRP30047 84 aa9.24□□□□□ -0.93
CCHCR1-227ENST00000508852 RHOHQ15669 191 aa9.24□□□□□ -0.93
CCHCR1-227ENST00000508852 PIK3CD-AS1Q5SR53 167 aa9.24□□□□□ -0.93
CCHCR1-227ENST00000508852 CYB561D1Q8N8Q1 229 aa9.24□□□□□ -0.93
CCHCR1-227ENST00000508852 TMEM75Q8N9X5 138 aa9.24□□□□□ -0.93
CCHCR1-227ENST00000508852 NKX6-2Q9C056 277 aaPredicted RBP9.24□□□□□ -0.93
CCHCR1-227ENST00000508852 EPDR1Q9UM22 224 aa9.24□□□□□ -0.93
CCHCR1-227ENST00000508852 PSG8Q9UQ74 426 aa9.24□□□□□ -0.93
CCHCR1-227ENST00000508852 DNAH5Q8TE73 4624 aa9.24□□□□□ -0.93
CCHCR1-227ENST00000508852 A0A087WTM6 91 aa9.23□□□□□ -0.93
CCHCR1-227ENST00000508852 IGHV3-38A0A0C4DH36 116 aa9.23□□□□□ -0.93
CCHCR1-227ENST00000508852 A0A1W2PRE2 83 aa9.23□□□□□ -0.93
CCHCR1-227ENST00000508852 HMGB3O15347 200 aaKnown RBP9.23□□□□□ -0.93
CCHCR1-227ENST00000508852 ATP6V0CP27449 155 aa9.23□□□□□ -0.93
CCHCR1-227ENST00000508852 GNG5P63218 68 aa9.23□□□□□ -0.93
CCHCR1-227ENST00000508852 FLI1Q01543 452 aaPredicted RBP9.23□□□□□ -0.93
CCHCR1-227ENST00000508852 WFDC10BQ8IUB3 73 aa9.23□□□□□ -0.93
CCHCR1-227ENST00000508852 TVP23CQ96ET8 276 aa9.23□□□□□ -0.93
CCHCR1-227ENST00000508852 ABCA13Q86UQ4 5058 aa9.23□□□□□ -0.93
CCHCR1-227ENST00000508852 APOBP04114 4563 aaKnown RBP9.22□□□□□ -0.93
CCHCR1-227ENST00000508852 RS1O15537 224 aa9.22□□□□□ -0.93
CCHCR1-227ENST00000508852 GCGP01275 180 aa9.22□□□□□ -0.93
CCHCR1-227ENST00000508852 GIPP09681 153 aaPredicted RBP9.22□□□□□ -0.93
CCHCR1-227ENST00000508852 MGST1P10620 155 aaKnown RBP9.22□□□□□ -0.93
CCHCR1-227ENST00000508852 SUMO1P63165 101 aaKnown RBP9.22□□□□□ -0.93
CCHCR1-227ENST00000508852 LINC01556Q5JQF7 62 aa9.22□□□□□ -0.93
CCHCR1-227ENST00000508852 KRTAP4-5Q9BYR2 181 aa9.22□□□□□ -0.93
CCHCR1-227ENST00000508852 PSCAO43653 123 aa9.21□□□□□ -0.94
CCHCR1-227ENST00000508852 EIF3GO75821 320 aaKnown RBP eCLIP9.21□□□□□ -0.94
CCHCR1-227ENST00000508852 CFAP126Q5VTH2 177 aa9.21□□□□□ -0.94
CCHCR1-227ENST00000508852 C9orf85Q96MD7 179 aa9.21□□□□□ -0.94
CCHCR1-227ENST00000508852 FABP5P3A8MUU1 101 aa9.2□□□□□ -0.94
CCHCR1-227ENST00000508852 A8MWV9 139 aa9.2□□□□□ -0.94
CCHCR1-227ENST00000508852 S100A4P26447 101 aaKnown RBP9.2□□□□□ -0.94
CCHCR1-227ENST00000508852 OR10J3Q5JRS4 329 aa9.2□□□□□ -0.94
CCHCR1-227ENST00000508852 LELP1Q5T871 98 aa9.2□□□□□ -0.94
CCHCR1-227ENST00000508852 ZFP2Q6ZN57 461 aa9.2□□□□□ -0.94
CCHCR1-227ENST00000508852 PRNTQ86SH4 94 aa9.2□□□□□ -0.94
CCHCR1-227ENST00000508852 SLC25A29Q8N8R3 303 aa9.2□□□□□ -0.94
CCHCR1-227ENST00000508852 NTN5Q8WTR8 489 aaPredicted RBP9.2□□□□□ -0.94
CCHCR1-227ENST00000508852 CTXND1A0A1B0GTU2 59 aa9.19□□□□□ -0.94
CCHCR1-227ENST00000508852 IBA57-AS1B1ANH7 110 aa9.19□□□□□ -0.94
CCHCR1-227ENST00000508852 EPM2AB3EWF7 344 aa9.19□□□□□ -0.94
CCHCR1-227ENST00000508852 HIST1H2BAQ96A08 127 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms