RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 TMUB2Q71RG4 321 aa16.78■□□□□ 0.28
SRPK1-210ENST00000508473 STOML3Q8TAV4 291 aa16.78■□□□□ 0.28
SRPK1-210ENST00000508473 SPXQ9BT56 116 aa16.78■□□□□ 0.28
SRPK1-210ENST00000508473 SDF2L1Q9HCN8 221 aa16.78■□□□□ 0.28
SRPK1-210ENST00000508473 PEX7O00628 323 aa16.77■□□□□ 0.28
SRPK1-210ENST00000508473 PFDN1O60925 122 aa16.77■□□□□ 0.28
SRPK1-210ENST00000508473 FAM213BQ8TBF2 198 aa16.77■□□□□ 0.28
SRPK1-210ENST00000508473 C11orf21Q9P2W6 132 aa16.77■□□□□ 0.28
SRPK1-210ENST00000508473 H3BNG1 76 aa16.76■□□□□ 0.27
SRPK1-210ENST00000508473 ZFP69Q49AA0 526 aa16.76■□□□□ 0.27
SRPK1-210ENST00000508473 SMUG1Q53HV7 270 aa16.76■□□□□ 0.27
SRPK1-210ENST00000508473 Q6ZR54 194 aa16.76■□□□□ 0.27
SRPK1-210ENST00000508473 ZNRF2Q8NHG8 242 aa16.76■□□□□ 0.27
SRPK1-210ENST00000508473 MUC4Q99102 2169 aa16.76■□□□□ 0.27
SRPK1-210ENST00000508473 A0A1B0GV50 99 aa16.75■□□□□ 0.27
SRPK1-210ENST00000508473 FBLL1A6NHQ2 334 aaKnown RBP16.75■□□□□ 0.27
SRPK1-210ENST00000508473 SFTA3P0C7M3 94 aa16.75■□□□□ 0.27
SRPK1-210ENST00000508473 SAPCD1Q5SSQ6 148 aa16.75■□□□□ 0.27
SRPK1-210ENST00000508473 KCNS1Q96KK3 526 aa16.75■□□□□ 0.27
SRPK1-210ENST00000508473 NKX6-2Q9C056 277 aaPredicted RBP16.75■□□□□ 0.27
SRPK1-210ENST00000508473 PAX4O43316 350 aa16.74■□□□□ 0.27
SRPK1-210ENST00000508473 PPT1P50897 306 aa16.74■□□□□ 0.27
SRPK1-210ENST00000508473 FHL2Q14192 279 aa16.74■□□□□ 0.27
SRPK1-210ENST00000508473 CST9LP1Q5W188 147 aa16.74■□□□□ 0.27
SRPK1-210ENST00000508473 SFT2D1Q8WV19 159 aa16.74■□□□□ 0.27
SRPK1-210ENST00000508473 RASL10AQ92737 203 aa16.74■□□□□ 0.27
SRPK1-210ENST00000508473 ARL2-SNX15V9GYD0 113 aa16.74■□□□□ 0.27
SRPK1-210ENST00000508473 A0A096LPF7 62 aa16.73■□□□□ 0.27
SRPK1-210ENST00000508473 UMAD1C9J7I0 102 aa16.73■□□□□ 0.27
SRPK1-210ENST00000508473 RTL8CO15255 209 aa16.73■□□□□ 0.27
SRPK1-210ENST00000508473 PFN1P07737 140 aaKnown RBP16.73■□□□□ 0.27
SRPK1-210ENST00000508473 EIF5AP63241 154 aaKnown RBP16.73■□□□□ 0.27
SRPK1-210ENST00000508473 ESRGQ1W209 222 aa16.73■□□□□ 0.27
SRPK1-210ENST00000508473 Q6ZNX1 250 aa16.73■□□□□ 0.27
SRPK1-210ENST00000508473 HIST1H2BAQ96A08 127 aa16.73■□□□□ 0.27
SRPK1-210ENST00000508473 ZNF479Q96JC4 524 aa16.73■□□□□ 0.27
SRPK1-210ENST00000508473 DNAH2Q9P225 4427 aa16.73■□□□□ 0.27
SRPK1-210ENST00000508473 TRGV4A0A0C4DH28 118 aa16.72■□□□□ 0.27
SRPK1-210ENST00000508473 M0R2P5 195 aa16.72■□□□□ 0.27
SRPK1-210ENST00000508473 Q86TA4 180 aa16.72■□□□□ 0.27
SRPK1-210ENST00000508473 MBD3L1Q8WWY6 194 aa16.72■□□□□ 0.27
SRPK1-210ENST00000508473 PRO0255Q9UI72 69 aa16.72■□□□□ 0.27
SRPK1-210ENST00000508473 HHLA3Q9XRX5 114 aa16.72■□□□□ 0.27
SRPK1-210ENST00000508473 PAGE4O60829 102 aa16.71■□□□□ 0.27
SRPK1-210ENST00000508473 TPT1P13693 172 aaKnown RBP16.71■□□□□ 0.27
SRPK1-210ENST00000508473 CRYBA4P53673 196 aa16.71■□□□□ 0.27
SRPK1-210ENST00000508473 LINC00336Q6ZUF6 198 aa16.71■□□□□ 0.27
SRPK1-210ENST00000508473 TCTE3Q8IZS6 198 aa16.7■□□□□ 0.26
SRPK1-210ENST00000508473 NBDYA0A0U1RRE5 68 aa16.69■□□□□ 0.26
SRPK1-210ENST00000508473 SLAQ13239 276 aa16.69■□□□□ 0.26
SRPK1-210ENST00000508473 LGALSLQ3ZCW2 172 aaPredicted RBP16.69■□□□□ 0.26
SRPK1-210ENST00000508473 ICOSQ9Y6W8 199 aa16.69■□□□□ 0.26
SRPK1-210ENST00000508473 hCG_2014768A0A024R1R8 64 aa16.68■□□□□ 0.26
SRPK1-210ENST00000508473 C9JCJ5 164 aa16.68■□□□□ 0.26
SRPK1-210ENST00000508473 DPPA3Q6W0C5 159 aa16.68■□□□□ 0.26
SRPK1-210ENST00000508473 OR4C5Q8NGB2 326 aa16.68■□□□□ 0.26
SRPK1-210ENST00000508473 Q9H8V8 135 aa16.68■□□□□ 0.26
SRPK1-210ENST00000508473 TRAV4A0A0B4J268 109 aa16.67■□□□□ 0.26
SRPK1-210ENST00000508473 PRSS29PA6NIE9 313 aa16.67■□□□□ 0.26
SRPK1-210ENST00000508473 H2AFB1P0C5Y9 115 aa16.67■□□□□ 0.26
SRPK1-210ENST00000508473 UBE2G1P62253 170 aa16.67■□□□□ 0.26
SRPK1-210ENST00000508473 C1orf134Q5TEV5 83 aa16.67■□□□□ 0.26
SRPK1-210ENST00000508473 FABP5P3A8MUU1 101 aa16.66■□□□□ 0.26
SRPK1-210ENST00000508473 FMC1Q96HJ9 113 aa16.66■□□□□ 0.26
SRPK1-210ENST00000508473 MRPS16Q9Y3D3 137 aaKnown RBP16.66■□□□□ 0.26
SRPK1-210ENST00000508473 DNAH17Q9UFH2 4485 aa16.66■□□□□ 0.26
SRPK1-210ENST00000508473 FAT2Q9NYQ8 4349 aa16.65■□□□□ 0.26
SRPK1-210ENST00000508473 IGKV3D-20A0A0C4DH25 116 aa16.65■□□□□ 0.26
SRPK1-210ENST00000508473 AKR1C3P42330 323 aa16.65■□□□□ 0.26
SRPK1-210ENST00000508473 ZNF876PQ49A33 203 aa16.65■□□□□ 0.26
SRPK1-210ENST00000508473 SOHLH1Q5JUK2 328 aa16.65■□□□□ 0.26
SRPK1-210ENST00000508473 ZC2HC1AQ96GY0 325 aa16.65■□□□□ 0.26
SRPK1-210ENST00000508473 C9orf85Q96MD7 179 aa16.65■□□□□ 0.26
SRPK1-210ENST00000508473 CRIP1P50238 77 aa16.64■□□□□ 0.25
SRPK1-210ENST00000508473 TCEAL7Q9BRU2 100 aa16.64■□□□□ 0.25
SRPK1-210ENST00000508473 UPK3BQ9BT76 320 aa16.64■□□□□ 0.25
SRPK1-210ENST00000508473 ZFP30Q9Y2G7 519 aa16.64■□□□□ 0.25
SRPK1-210ENST00000508473 C1QBP02746 253 aa16.63■□□□□ 0.25
SRPK1-210ENST00000508473 RNASE3P12724 160 aaKnown RBP16.63■□□□□ 0.25
SRPK1-210ENST00000508473 MRPL23Q16540 153 aaKnown RBP16.63■□□□□ 0.25
SRPK1-210ENST00000508473 ORM1P02763 201 aa16.62■□□□□ 0.25
SRPK1-210ENST00000508473 GYPEP15421 78 aa16.62■□□□□ 0.25
SRPK1-210ENST00000508473 SCO2A0A1W2PP80 73 aa16.61■□□□□ 0.25
SRPK1-210ENST00000508473 PGPEP1LA6NFU8 196 aa16.61■□□□□ 0.25
SRPK1-210ENST00000508473 K7EQD1 137 aa16.61■□□□□ 0.25
SRPK1-210ENST00000508473 M0R036 132 aa16.61■□□□□ 0.25
SRPK1-210ENST00000508473 SH2D1AO60880 128 aa16.61■□□□□ 0.25
SRPK1-210ENST00000508473 S100A4P26447 101 aaKnown RBP16.61■□□□□ 0.25
SRPK1-210ENST00000508473 CCL20P78556 96 aa16.61■□□□□ 0.25
SRPK1-210ENST00000508473 AKAP14Q86UN6 197 aa16.61■□□□□ 0.25
SRPK1-210ENST00000508473 PCNPQ8WW12 178 aaKnown RBP16.61■□□□□ 0.25
SRPK1-210ENST00000508473 TRBV6-1A0A0K0K1D8 114 aa16.6■□□□□ 0.25
SRPK1-210ENST00000508473 A0A1B0GVY2 172 aa16.6■□□□□ 0.25
SRPK1-210ENST00000508473 B4DEV8 164 aa16.6■□□□□ 0.25
SRPK1-210ENST00000508473 LTAP01374 205 aa16.6■□□□□ 0.25
SRPK1-210ENST00000508473 SRIP30626 198 aa16.6■□□□□ 0.25
SRPK1-210ENST00000508473 ASIPP42127 132 aa16.6■□□□□ 0.25
SRPK1-210ENST00000508473 ZNF506Q5JVG8 444 aa16.6■□□□□ 0.25
SRPK1-210ENST00000508473 EIF5AL1Q6IS14 154 aaKnown RBP16.6■□□□□ 0.25
SRPK1-210ENST00000508473 NEGR1Q7Z3B1 354 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms