RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 LAMB2P55268 1798 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 CHD6Q8TD26 2715 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 KMT2BQ9UMN6 2715 aaPredicted RBP1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 CCDC88CQ9P219 2028 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 PLXNA3P51805 1871 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 SETXQ7Z333 2677 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 TRBV27A0A0K0K1C4 114 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 OR2T8A6NH00 312 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 H3BMG7 143 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 HMGN1P05114 100 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 SCTP09683 121 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 IL9P15248 144 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 CMPK1P30085 196 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 DSCR4P56555 118 aaPredicted RBP1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 CDK6Q00534 326 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 DEFB113Q30KQ7 82 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 C10orf55Q5SWW7 151 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 Q6ZRN7 208 aaPredicted RBP1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 DIRC1Q969H9 104 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 ZC2HC1AQ96GY0 325 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 HYLS1Q96M11 299 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 TMEM138Q9NPI0 162 aa1.74□□□□□ -2.13
TRAPPC13-208ENST00000505553 RIF1Q5UIP0 2472 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-208ENST00000505553 A0A0G2JMZ2 1700 aa1.73□□□□□ -2.13
TRAPPC13-208ENST00000505553 GVINP1Q7Z2Y8 2422 aa1.73□□□□□ -2.13
TRAPPC13-208ENST00000505553 TRGV2A0A075B6R0 118 aa1.73□□□□□ -2.13
TRAPPC13-208ENST00000505553 TRBV6-5A0A0K0K1A5 114 aa1.73□□□□□ -2.13
TRAPPC13-208ENST00000505553 TCRBV4S1A1TA0A5B7 111 aa1.73□□□□□ -2.13
TRAPPC13-208ENST00000505553 hDV103S1A0JD37 113 aa1.73□□□□□ -2.13
TRAPPC13-208ENST00000505553 E7EUB6 86 aa1.73□□□□□ -2.13
TRAPPC13-208ENST00000505553 TCTE3Q8IZS6 198 aa1.73□□□□□ -2.13
TRAPPC13-208ENST00000505553 TP53RKQ96S44 253 aa1.73□□□□□ -2.13
TRAPPC13-208ENST00000505553 FAM186AA6NE01 2351 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 CACNA1HO95180 2353 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 KIAA2026Q5HYC2 2103 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 COL4A6Q14031 1691 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 ANKRD36CQ5JPF3 1778 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 PRUNE2Q8WUY3 3088 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 MAP1BP46821 2468 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 PSME4Q14997 1843 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 TRAV27A0A087WT01 109 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 IGKV2D-26A0A0A0MRZ7 120 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 C5orf58C9J3I9 102 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 M0QZK8 103 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 RPL22P35268 128 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 CKS1BP61024 79 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 CDK5R1Q15078 307 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 MORN2Q502X0 79 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 LRRC18Q8N456 261 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 TEX29Q8N6K0 151 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 Q8N814 137 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 OR5A2Q8NGI9 324 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 OR51A4Q8NGJ6 313 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 OR4C6Q8NH72 309 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 CBLN4Q9NTU7 201 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 TPRKBQ9Y3C4 175 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 EYSQ5T1H1 3165 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 CDH23Q9H251 3354 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 COL4A1P02462 1669 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 MGAMO43451 1857 aa1.72□□□□□ -2.13
TRAPPC13-208ENST00000505553 PRRC2BQ5JSZ5 2229 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 USP24Q9UPU5 2620 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 ZNF292O60281 2723 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 A0A087WSZ3 146 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 TRAV10A0A0B4J240 114 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 C9JAW5 83 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 HYPMO75409 117 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 ERC2-IT1O76042 136 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 TNFSF15O95150 251 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 OR2H2O95918 312 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 IGLV1-51P01701 117 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 TPT1P13693 172 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 FABP4P15090 132 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 SDC4P31431 198 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 MAXP61244 160 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 LSM3P62310 102 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 KRTAP13-4Q3LI77 160 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 C1orf137Q5JT78 98 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 C1orf134Q5TEV5 83 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 CLECL1Q8IZS7 167 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 MORN4Q8NDC4 146 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 ZNF431Q8TF32 576 aaPredicted RBP1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 BRK1Q8WUW1 75 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 MAGOHBQ96A72 148 aaKnown RBP1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 RAB37Q96AX2 223 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 HIGD1AQ9Y241 93 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 ZFYVE26Q68DK2 2539 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 ZFHX4Q86UP3 3567 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 NAV2Q8IVL1 2488 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 SPTBN2O15020 2390 aa1.71□□□□□ -2.14
TRAPPC13-208ENST00000505553 MPDZO75970 2070 aa1.7□□□□□ -2.14
TRAPPC13-208ENST00000505553 NUP210Q8TEM1 1887 aaPredicted RBP1.7□□□□□ -2.14
TRAPPC13-208ENST00000505553 PLXNA1Q9UIW2 1896 aa1.7□□□□□ -2.14
TRAPPC13-208ENST00000505553 SIPA1L3O60292 1781 aaPredicted RBP1.7□□□□□ -2.14
TRAPPC13-208ENST00000505553 RFX7Q2KHR2 1363 aa1.7□□□□□ -2.14
TRAPPC13-208ENST00000505553 CRYGSP22914 178 aa1.7□□□□□ -2.14
TRAPPC13-208ENST00000505553 ZNF93P35789 620 aaPredicted RBP1.7□□□□□ -2.14
TRAPPC13-208ENST00000505553 CIRBPQ14011 172 aaKnown RBP1.7□□□□□ -2.14
TRAPPC13-208ENST00000505553 ARPINQ7Z6K5 226 aa1.7□□□□□ -2.14
TRAPPC13-208ENST00000505553 NAT14Q8WUY8 206 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms