RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 TTC32Q5I0X7 151 aa8.92□□□□□ -0.98
DDX41-204ENST00000504807 WFDC10BQ8IUB3 73 aa8.92□□□□□ -0.98
DDX41-204ENST00000504807 TMEM75Q8N9X5 138 aa8.92□□□□□ -0.98
DDX41-204ENST00000504807 TMED6Q8WW62 240 aa8.92□□□□□ -0.98
DDX41-204ENST00000504807 LENEPQ9Y5L5 61 aa8.92□□□□□ -0.98
DDX41-204ENST00000504807 GGTLC3B5MD39 225 aa8.91□□□□□ -0.98
DDX41-204ENST00000504807 G3V3Q6 166 aa8.91□□□□□ -0.98
DDX41-204ENST00000504807 STAG3L2P0CL84 134 aa8.91□□□□□ -0.98
DDX41-204ENST00000504807 STAG3L3P0CL85 134 aa8.91□□□□□ -0.98
DDX41-204ENST00000504807 DNAH10OSP0CZ25 163 aa8.91□□□□□ -0.98
DDX41-204ENST00000504807 BTF3P20290 206 aaKnown RBP8.91□□□□□ -0.98
DDX41-204ENST00000504807 ATP6V0CP27449 155 aa8.91□□□□□ -0.98
DDX41-204ENST00000504807 DPPA3Q6W0C5 159 aa8.91□□□□□ -0.98
DDX41-204ENST00000504807 PQLC2Q6ZP29 291 aa8.91□□□□□ -0.98
DDX41-204ENST00000504807 OR2G3Q8NGZ4 309 aa8.91□□□□□ -0.98
DDX41-204ENST00000504807 SUN5Q8TC36 379 aa8.91□□□□□ -0.98
DDX41-204ENST00000504807 RAB24Q969Q5 203 aa8.91□□□□□ -0.98
DDX41-204ENST00000504807 AQP10Q96PS8 301 aa8.91□□□□□ -0.98
DDX41-204ENST00000504807 A0A1W2PPV4 95 aa8.9□□□□□ -0.98
DDX41-204ENST00000504807 RNF222A6NCQ9 220 aa8.9□□□□□ -0.98
DDX41-204ENST00000504807 GYPEP15421 78 aa8.9□□□□□ -0.98
DDX41-204ENST00000504807 CDC34P49427 236 aaPredicted RBP8.9□□□□□ -0.98
DDX41-204ENST00000504807 ZNF726P1Q15940 193 aa8.9□□□□□ -0.98
DDX41-204ENST00000504807 FAM159AQ6UWV7 190 aa8.9□□□□□ -0.98
DDX41-204ENST00000504807 IQCF2Q8IXL9 164 aa8.9□□□□□ -0.98
DDX41-204ENST00000504807 SYT8Q8NBV8 401 aa8.9□□□□□ -0.98
DDX41-204ENST00000504807 RNF213Q63HN8 5207 aa8.9□□□□□ -0.98
DDX41-204ENST00000504807 TRGV11A0A075B6L2 103 aa8.89□□□□□ -0.99
DDX41-204ENST00000504807 TRGV4A0A0C4DH28 118 aa8.89□□□□□ -0.99
DDX41-204ENST00000504807 GCHFRP30047 84 aa8.89□□□□□ -0.99
DDX41-204ENST00000504807 XGP55808 180 aa8.89□□□□□ -0.99
DDX41-204ENST00000504807 SERTAD4-AS1Q5TG53 156 aa8.89□□□□□ -0.99
DDX41-204ENST00000504807 CMTM2Q8TAZ6 248 aa8.89□□□□□ -0.99
DDX41-204ENST00000504807 LINC00479Q96M42 142 aa8.89□□□□□ -0.99
DDX41-204ENST00000504807 TREM1Q9NP99 234 aa8.89□□□□□ -0.99
DDX41-204ENST00000504807 TRAV4A0A0B4J268 109 aa8.88□□□□□ -0.99
DDX41-204ENST00000504807 PTTG1O95997 202 aa8.88□□□□□ -0.99
DDX41-204ENST00000504807 SMR3BP02814 79 aaPredicted RBP8.88□□□□□ -0.99
DDX41-204ENST00000504807 TCRAP04437 139 aa8.88□□□□□ -0.99
DDX41-204ENST00000504807 MRPL23Q16540 153 aaKnown RBP8.88□□□□□ -0.99
DDX41-204ENST00000504807 RPL7L1Q6DKI1 246 aaKnown RBP8.88□□□□□ -0.99
DDX41-204ENST00000504807 NEGR1Q7Z3B1 354 aa8.88□□□□□ -0.99
DDX41-204ENST00000504807 SPXQ9BT56 116 aa8.88□□□□□ -0.99
DDX41-204ENST00000504807 TRAV21A0A0B4J279 112 aa8.87□□□□□ -0.99
DDX41-204ENST00000504807 M0R2P5 195 aa8.87□□□□□ -0.99
DDX41-204ENST00000504807 ARL6IP6Q8N6S5 226 aa8.87□□□□□ -0.99
DDX41-204ENST00000504807 PSMG3Q9BT73 122 aaPredicted RBP8.87□□□□□ -0.99
DDX41-204ENST00000504807 MED28Q9H204 178 aa8.87□□□□□ -0.99
DDX41-204ENST00000504807 BATF3Q9NR55 127 aa8.87□□□□□ -0.99
DDX41-204ENST00000504807 TRAV34A0A0B4J273 112 aa8.86□□□□□ -0.99
DDX41-204ENST00000504807 GATA1P15976 413 aaPredicted RBP8.86□□□□□ -0.99
DDX41-204ENST00000504807 SRIP30626 198 aa8.86□□□□□ -0.99
DDX41-204ENST00000504807 SUMO1P63165 101 aaKnown RBP8.86□□□□□ -0.99
DDX41-204ENST00000504807 Q6ZSN1 163 aa8.86□□□□□ -0.99
DDX41-204ENST00000504807 OR4C5Q8NGB2 326 aa8.86□□□□□ -0.99
DDX41-204ENST00000504807 C9orf85Q96MD7 179 aa8.86□□□□□ -0.99
DDX41-204ENST00000504807 PLA2G2DQ9UNK4 145 aa8.86□□□□□ -0.99
DDX41-204ENST00000504807 PSG8Q9UQ74 426 aa8.86□□□□□ -0.99
DDX41-204ENST00000504807 IGHV3-73A0A0B4J1V6 119 aa8.85□□□□□ -0.99
DDX41-204ENST00000504807 PGPEP1LA6NFU8 196 aa8.85□□□□□ -0.99
DDX41-204ENST00000504807 C9JCJ5 164 aa8.85□□□□□ -0.99
DDX41-204ENST00000504807 GCGP01275 180 aa8.85□□□□□ -0.99
DDX41-204ENST00000504807 GIPP09681 153 aaPredicted RBP8.85□□□□□ -0.99
DDX41-204ENST00000504807 RNASE3P12724 160 aaKnown RBP8.85□□□□□ -0.99
DDX41-204ENST00000504807 SLAQ13239 276 aa8.85□□□□□ -0.99
DDX41-204ENST00000504807 FAM74A1Q5RGS3 127 aa8.85□□□□□ -0.99
DDX41-204ENST00000504807 C5orf17Q8NAS9 161 aa8.85□□□□□ -0.99
DDX41-204ENST00000504807 ASB13Q8WXK3 278 aa8.85□□□□□ -0.99
DDX41-204ENST00000504807 SDF2L1Q9HCN8 221 aa8.85□□□□□ -0.99
DDX41-204ENST00000504807 Q9UF83 564 aa8.85□□□□□ -0.99
DDX41-204ENST00000504807 EPDR1Q9UM22 224 aa8.85□□□□□ -0.99
DDX41-204ENST00000504807 TNFSF18Q9UNG2 199 aa8.85□□□□□ -0.99
DDX41-204ENST00000504807 RS1O15537 224 aa8.84□□□□□ -0.99
DDX41-204ENST00000504807 CFAP126Q5VTH2 177 aa8.84□□□□□ -0.99
DDX41-204ENST00000504807 PRNTQ86SH4 94 aa8.84□□□□□ -0.99
DDX41-204ENST00000504807 Q8N3U1 123 aa8.84□□□□□ -0.99
DDX41-204ENST00000504807 SLC25A29Q8N8R3 303 aa8.84□□□□□ -0.99
DDX41-204ENST00000504807 A0A087WTM6 91 aa8.83□□□□□ -1
DDX41-204ENST00000504807 FXYD6-FXYD2A0A087WZ82 144 aa8.83□□□□□ -1
DDX41-204ENST00000504807 IGKV3D-20A0A0C4DH25 116 aa8.83□□□□□ -1
DDX41-204ENST00000504807 PFN1P07737 140 aaKnown RBP8.83□□□□□ -1
DDX41-204ENST00000504807 FGF8P55075 233 aaPredicted RBP8.83□□□□□ -1
DDX41-204ENST00000504807 KRTAP10-1P60331 282 aa8.83□□□□□ -1
DDX41-204ENST00000504807 FLI1Q01543 452 aaPredicted RBP8.83□□□□□ -1
DDX41-204ENST00000504807 ZNF506Q5JVG8 444 aa8.83□□□□□ -1
DDX41-204ENST00000504807 CYTL1Q9NRR1 136 aa8.83□□□□□ -1
DDX41-204ENST00000504807 LY96Q9Y6Y9 160 aa8.83□□□□□ -1
DDX41-204ENST00000504807 SMLR1H3BR10 107 aa8.82□□□□□ -1
DDX41-204ENST00000504807 CXorf1O96002 111 aa8.82□□□□□ -1
DDX41-204ENST00000504807 ORM1P02763 201 aa8.82□□□□□ -1
DDX41-204ENST00000504807 CRIP1P50238 77 aa8.82□□□□□ -1
DDX41-204ENST00000504807 UBE2G2P60604 165 aa8.82□□□□□ -1
DDX41-204ENST00000504807 SERF2P84101 59 aa8.82□□□□□ -1
DDX41-204ENST00000504807 ZNF876PQ49A33 203 aa8.82□□□□□ -1
DDX41-204ENST00000504807 CYB561D1Q8N8Q1 229 aa8.82□□□□□ -1
DDX41-204ENST00000504807 JPT2Q9H910 190 aa8.82□□□□□ -1
DDX41-204ENST00000504807 MSRB1Q9NZV6 116 aa8.82□□□□□ -1
DDX41-204ENST00000504807 SERTM2A0A1B0GWG4 89 aa8.81□□□□□ -1
DDX41-204ENST00000504807 FAM229AH3BQW9 127 aa8.81□□□□□ -1
DDX41-204ENST00000504807 OR2T35Q8NGX2 323 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms