RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 GNRH2O43555 120 aa11.86□□□□□ -0.51
PRKCB-210ENST00000498739 TCTAP57738 103 aa11.86□□□□□ -0.51
PRKCB-210ENST00000498739 Q6ZTI0 123 aa11.86□□□□□ -0.51
PRKCB-210ENST00000498739 LINC00612Q8N6U2 182 aa11.86□□□□□ -0.51
PRKCB-210ENST00000498739 F5H768 121 aa11.85□□□□□ -0.51
PRKCB-210ENST00000498739 SPINK4O60575 86 aa11.85□□□□□ -0.51
PRKCB-210ENST00000498739 LTAP01374 205 aa11.85□□□□□ -0.51
PRKCB-210ENST00000498739 TYMSP04818 313 aa11.85□□□□□ -0.51
PRKCB-210ENST00000498739 S100A9P06702 114 aaKnown RBP11.85□□□□□ -0.51
PRKCB-210ENST00000498739 BCL2P10415 239 aa11.85□□□□□ -0.51
PRKCB-210ENST00000498739 ZC2HC1AQ96GY0 325 aa11.85□□□□□ -0.51
PRKCB-210ENST00000498739 TXNDC17Q9BRA2 123 aa11.85□□□□□ -0.51
PRKCB-210ENST00000498739 MRPL16Q9NX20 251 aaKnown RBP11.85□□□□□ -0.51
PRKCB-210ENST00000498739 C11orf21Q9P2W6 132 aa11.85□□□□□ -0.51
PRKCB-210ENST00000498739 APLNQ9ULZ1 77 aa11.85□□□□□ -0.51
PRKCB-210ENST00000498739 FABP5P3A8MUU1 101 aa11.84□□□□□ -0.51
PRKCB-210ENST00000498739 MEF2BQ02080 365 aaPredicted RBP11.84□□□□□ -0.51
PRKCB-210ENST00000498739 NHLRC2Q8NBF2 726 aa11.84□□□□□ -0.51
PRKCB-210ENST00000498739 NDUFAF3Q9BU61 184 aa11.84□□□□□ -0.51
PRKCB-210ENST00000498739 KMT2CQ8NEZ4 4911 aaKnown RBP11.84□□□□□ -0.51
PRKCB-210ENST00000498739 PLECQ15149 4684 aaKnown RBP11.84□□□□□ -0.51
PRKCB-210ENST00000498739 TRGV2A0A075B6R0 118 aa11.83□□□□□ -0.52
PRKCB-210ENST00000498739 IGHV3-16A0A0C4DH30 117 aa11.83□□□□□ -0.52
PRKCB-210ENST00000498739 LINC00476Q8WZB0 136 aa11.83□□□□□ -0.52
PRKCB-210ENST00000498739 C11orf52Q96A22 123 aa11.83□□□□□ -0.52
PRKCB-210ENST00000498739 VAX2Q9UIW0 290 aa11.83□□□□□ -0.52
PRKCB-210ENST00000498739 PDE6DO43924 150 aa11.82□□□□□ -0.52
PRKCB-210ENST00000498739 LY6G6CO95867 125 aa11.82□□□□□ -0.52
PRKCB-210ENST00000498739 TAGLN2P37802 199 aaKnown RBP11.82□□□□□ -0.52
PRKCB-210ENST00000498739 RPL35P42766 123 aaKnown RBP11.82□□□□□ -0.52
PRKCB-210ENST00000498739 CRIP1P50238 77 aa11.82□□□□□ -0.52
PRKCB-210ENST00000498739 LGALS9BQ3B8N2 356 aa11.82□□□□□ -0.52
PRKCB-210ENST00000498739 TMEM88Q6PEY1 159 aa11.82□□□□□ -0.52
PRKCB-210ENST00000498739 COX8CQ7Z4L0 72 aa11.82□□□□□ -0.52
PRKCB-210ENST00000498739 BAGE2Q86Y30 109 aa11.82□□□□□ -0.52
PRKCB-210ENST00000498739 FAM210BQ96KR6 192 aa11.82□□□□□ -0.52
PRKCB-210ENST00000498739 SPXQ9BT56 116 aa11.82□□□□□ -0.52
PRKCB-210ENST00000498739 DERL1Q9BUN8 251 aa11.82□□□□□ -0.52
PRKCB-210ENST00000498739 SH2D1AO60880 128 aa11.81□□□□□ -0.52
PRKCB-210ENST00000498739 TENM2Q9NT68 2774 aa11.81□□□□□ -0.52
PRKCB-210ENST00000498739 IGKV3D-20A0A0C4DH25 116 aa11.8□□□□□ -0.52
PRKCB-210ENST00000498739 ORM1P02763 201 aa11.8□□□□□ -0.52
PRKCB-210ENST00000498739 OR5I1Q13606 314 aa11.8□□□□□ -0.52
PRKCB-210ENST00000498739 FAM162BQ5T6X4 162 aa11.8□□□□□ -0.52
PRKCB-210ENST00000498739 LYPD6BQ8NI32 183 aa11.8□□□□□ -0.52
PRKCB-210ENST00000498739 C18orf15Q96N68 181 aa11.8□□□□□ -0.52
PRKCB-210ENST00000498739 MED9Q9NWA0 146 aa11.8□□□□□ -0.52
PRKCB-210ENST00000498739 ALMS1Q8TCU4 4167 aa11.79□□□□□ -0.52
PRKCB-210ENST00000498739 B4DEV8 164 aa11.79□□□□□ -0.52
PRKCB-210ENST00000498739 M0R036 132 aa11.79□□□□□ -0.52
PRKCB-210ENST00000498739 HOXA5P20719 270 aa11.79□□□□□ -0.52
PRKCB-210ENST00000498739 ZNF674Q2M3X9 581 aa11.79□□□□□ -0.52
PRKCB-210ENST00000498739 TEX261Q6UWH6 196 aa11.79□□□□□ -0.52
PRKCB-210ENST00000498739 RBFOX3A6NFN3 312 aa11.78□□□□□ -0.52
PRKCB-210ENST00000498739 M0R2P5 195 aa11.78□□□□□ -0.52
PRKCB-210ENST00000498739 IGHV3-53P01767 116 aa11.78□□□□□ -0.52
PRKCB-210ENST00000498739 S100A4P26447 101 aaKnown RBP11.78□□□□□ -0.52
PRKCB-210ENST00000498739 CENPWQ5EE01 88 aa11.78□□□□□ -0.52
PRKCB-210ENST00000498739 LGALS9CQ6DKI2 356 aa11.78□□□□□ -0.52
PRKCB-210ENST00000498739 PRR27Q6MZM9 219 aa11.78□□□□□ -0.52
PRKCB-210ENST00000498739 MLST8Q9BVC4 326 aa11.78□□□□□ -0.52
PRKCB-210ENST00000498739 RAB19A4D1S5 217 aa11.77□□□□□ -0.53
PRKCB-210ENST00000498739 ASIPP42127 132 aa11.77□□□□□ -0.53
PRKCB-210ENST00000498739 C15orf53Q8NAA6 179 aa11.77□□□□□ -0.53
PRKCB-210ENST00000498739 RASL10AQ92737 203 aa11.77□□□□□ -0.53
PRKCB-210ENST00000498739 C9orf85Q96MD7 179 aa11.77□□□□□ -0.53
PRKCB-210ENST00000498739 SACSQ9NZJ4 4579 aa11.76□□□□□ -0.53
PRKCB-210ENST00000498739 TMSB15BA0A087X1C1 80 aa11.76□□□□□ -0.53
PRKCB-210ENST00000498739 KRBOX1C9JBD0 128 aa11.76□□□□□ -0.53
PRKCB-210ENST00000498739 C9JCJ5 164 aa11.76□□□□□ -0.53
PRKCB-210ENST00000498739 RNASE3P12724 160 aaKnown RBP11.76□□□□□ -0.53
PRKCB-210ENST00000498739 GNG4P50150 75 aa11.76□□□□□ -0.53
PRKCB-210ENST00000498739 TOR2AQ5JU69 321 aa11.76□□□□□ -0.53
PRKCB-210ENST00000498739 PCNPQ8WW12 178 aaKnown RBP11.76□□□□□ -0.53
PRKCB-210ENST00000498739 LYSTQ99698 3801 aa11.76□□□□□ -0.53
PRKCB-210ENST00000498739 TRAV26-1A0A087WT03 109 aa11.75□□□□□ -0.53
PRKCB-210ENST00000498739 A0A0J9YY99 117 aa11.75□□□□□ -0.53
PRKCB-210ENST00000498739 GRIFINA4D1Z8 144 aa11.75□□□□□ -0.53
PRKCB-210ENST00000498739 NUDT3O95989 172 aa11.75□□□□□ -0.53
PRKCB-210ENST00000498739 MGST1P10620 155 aaKnown RBP11.75□□□□□ -0.53
PRKCB-210ENST00000498739 LINC01559Q495D7 138 aa11.75□□□□□ -0.53
PRKCB-210ENST00000498739 ZNF506Q5JVG8 444 aa11.75□□□□□ -0.53
PRKCB-210ENST00000498739 EIF5A2Q9GZV4 153 aaKnown RBP11.75□□□□□ -0.53
PRKCB-210ENST00000498739 SFTA3P0C7M3 94 aa11.74□□□□□ -0.53
PRKCB-210ENST00000498739 ZNF876PQ49A33 203 aa11.74□□□□□ -0.53
PRKCB-210ENST00000498739 ZNF479Q96JC4 524 aa11.74□□□□□ -0.53
PRKCB-210ENST00000498739 FAM210AQ96ND0 272 aa11.74□□□□□ -0.53
PRKCB-210ENST00000498739 DNAH1Q9P2D7 4330 aa11.74□□□□□ -0.53
PRKCB-210ENST00000498739 TRBV20OR9-2A0A075B6H5 130 aa11.73□□□□□ -0.53
PRKCB-210ENST00000498739 PGPEP1LA6NFU8 196 aa11.73□□□□□ -0.53
PRKCB-210ENST00000498739 H3BVH4 76 aa11.73□□□□□ -0.53
PRKCB-210ENST00000498739 IGLV2-8P01709 118 aa11.73□□□□□ -0.53
PRKCB-210ENST00000498739 P0DMU3 169 aa11.73□□□□□ -0.53
PRKCB-210ENST00000498739 FAM231AP0DMU4 169 aa11.73□□□□□ -0.53
PRKCB-210ENST00000498739 FAM231CP0DMU5 169 aa11.73□□□□□ -0.53
PRKCB-210ENST00000498739 RPL19P84098 196 aaKnown RBP11.73□□□□□ -0.53
PRKCB-210ENST00000498739 OR4C5Q8NGB2 326 aa11.73□□□□□ -0.53
PRKCB-210ENST00000498739 SMIM12Q96EX1 92 aa11.73□□□□□ -0.53
PRKCB-210ENST00000498739 TRAV4A0A0B4J268 109 aa11.72□□□□□ -0.53
PRKCB-210ENST00000498739 TRGV4A0A0C4DH28 118 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms